FFCP PHASE1:Hg19::chr3:147126937..147126949,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:147126937..147126949,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_at_chr3:147126937..147126949,- | |description=CAGE_peak_at_chr3:147126937..147126949,- | ||
|id=chr3:147126937..147126949,- | |id=chr3:147126937..147126949,- | ||
|ontology_enrichment_celltype=CL:0002575;4.66e-34;2!CL:0000228;9.48e-18;1!CL:0002372;9.48e-18;1!CL:0000669;1.39e-17;4!CL:0000346;8.86e-07;3!CL:1000428;8.86e-07;3!CL:0000708;8.86e-07;3!CL:0002603;8.86e-07;3 | |ontology_enrichment_celltype=CL:0002603!1.80e-10!3;CL:0000064!9.10e-10!3;CL:0005012!9.10e-10!3;CL:0000067!9.10e-10!3;CL:0002304!9.10e-10!3;CL:0002575!5.66e-08!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0002575;4.66e-34;2!CL:0000228;9.48e-18;1!CL:0002372;9.48e-18;1!CL:0000669;1.39e-17;4!CL:0000346;8.86e-07;3!CL:1000428;8.86e-07;3!CL:0000708;8.86e-07;3!CL:0002603;8.86e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002575,8.39e-34,2;CL:0000228,6.23e-18,1;CL:0002372,6.23e-18,1;CL:0000669,1.86e-17,4;CL:0000708,7.28e-07,3;CL:0000346,8.62e-07,3;CL:1000428,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.83e-51;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
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|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;9.83e-45;6!UBERON:0004733;1.16e-34;12!UBERON:0002028;1.16e-34;12!UBERON:0004732;5.15e-32;13!UBERON:0002680;5.26e-30;9!UBERON:0001895;5.26e-30;9!UBERON:0000073;3.98e-07;53!UBERON:0002616;3.98e-07;53!UBERON:0001896;8.86e-07;3!UBERON:0000412;8.86e-07;3!UBERON:0003210;8.86e-07;3!UBERON:0001992;8.86e-07;3!UBERON:0005290;8.86e-07;3 | |||
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| ||
|short_description=p@chr3:147126937..147126949,- | |short_description=p@chr3:147126937..147126949,- | ||
}} | }} |
Latest revision as of 16:44, 29 July 2015
Short description: | p@chr3:147126937..147126949, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:147126937..147126949, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 8.39e-34 | 2 |
multinucleate cell | 6.23e-18 | 1 |
myotube | 6.23e-18 | 1 |
pericyte cell | 1.86e-17 | 4 |
leptomeningeal cell | 7.28e-07 | 3 |
hair follicle dermal papilla cell | 8.62e-07 | 3 |
stem cell of epidermis | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.30e-44 | 6 |
rhombic lip | 1.30e-44 | 6 |
segmental subdivision of hindbrain | 1.44e-34 | 12 |
hindbrain | 1.44e-34 | 12 |
presumptive hindbrain | 1.44e-34 | 12 |
segmental subdivision of nervous system | 6.25e-32 | 13 |
regional part of metencephalon | 6.34e-30 | 9 |
metencephalon | 6.34e-30 | 9 |
future metencephalon | 6.34e-30 | 9 |
posterior neural tube | 1.05e-27 | 15 |
chordal neural plate | 1.05e-27 | 15 |
regional part of nervous system | 6.71e-11 | 53 |
regional part of brain | 6.71e-11 | 53 |
neural tube | 2.58e-10 | 56 |
neural rod | 2.58e-10 | 56 |
future spinal cord | 2.58e-10 | 56 |
neural keel | 2.58e-10 | 56 |
brain | 2.34e-08 | 68 |
future brain | 2.34e-08 | 68 |
ecto-epithelium | 2.44e-07 | 104 |
central nervous system | 5.25e-07 | 81 |
neural plate | 5.25e-07 | 82 |
presumptive neural plate | 5.25e-07 | 82 |
blood-cerebrospinal fluid barrier | 7.28e-07 | 3 |
dermal papilla | 8.62e-07 | 3 |
papillary layer of dermis | 8.62e-07 | 3 |
medulla oblongata | 9.12e-07 | 3 |
myelencephalon | 9.12e-07 | 3 |
future myelencephalon | 9.12e-07 | 3 |