FFCP PHASE1:Hg19::chr3:181495943..181495948,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:181495943..181495948,+ | |||
|description=CAGE_peak_at_chr3:181495943..181495948,+ | |description=CAGE_peak_at_chr3:181495943..181495948,+ | ||
|id=chr3:181495943..181495948,+ | |id=chr3:181495943..181495948,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.67e-18;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.61e-34;1!UBERON:0005425;3.61e-34;1!UBERON:0003056;2.31e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;5.35e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.35e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.63e-31!57;UBERON:0005068!4.63e-31!57;UBERON:0006241!4.63e-31!57;UBERON:0007135!4.63e-31!57;UBERON:0002791!1.19e-30!33;UBERON:0002616!8.80e-30!59;UBERON:0001893!1.27e-29!34;UBERON:0002780!1.31e-29!41;UBERON:0001890!1.31e-29!41;UBERON:0006240!1.31e-29!41;UBERON:0002020!2.02e-29!34;UBERON:0003528!2.02e-29!34;UBERON:0003080!8.82e-29!42;UBERON:0000955!5.06e-26!69;UBERON:0006238!5.06e-26!69;UBERON:0000956!6.89e-26!25;UBERON:0000203!6.89e-26!25;UBERON:0001869!4.79e-25!32;UBERON:0002346!4.94e-24!90;UBERON:0001017!8.68e-23!82;UBERON:0002619!1.10e-22!22;UBERON:0003075!9.37e-22!86;UBERON:0007284!9.37e-22!86;UBERON:0001950!1.19e-21!20;UBERON:0005743!2.10e-21!86;UBERON:0000073!1.95e-20!94;UBERON:0001016!1.95e-20!94;UBERON:0003056!3.63e-18!61;UBERON:0007023!2.03e-17!115;UBERON:0000033!1.10e-11!123;UBERON:0000924!2.33e-11!173;UBERON:0006601!2.33e-11!173;UBERON:0000153!7.74e-11!129;UBERON:0007811!7.74e-11!129;UBERON:0002021!1.64e-10!5;UBERON:0004121!5.76e-10!169;UBERON:0002298!4.29e-09!8;UBERON:0000025!1.53e-08!194;UBERON:0000200!2.84e-08!6;UBERON:0004732!8.58e-08!13;UBERON:0005162!8.98e-08!2;UBERON:0000122!8.98e-08!2;UBERON:0001897!1.06e-07!2;UBERON:0001870!2.83e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.61e-34;1!UBERON:0001785;3.61e-34;1!UBERON:0002464;3.61e-34;1!UBERON:0004904;3.61e-34;1!UBERON:0001021;3.61e-34;1!UBERON:0003714;7.67e-18;2!UBERON:0005162;7.67e-18;2!UBERON:0000122;7.67e-18;2!UBERON:0002331;3.59e-14;10!UBERON:0002346;1.63e-09;4!UBERON:0000923;1.63e-09;4!UBERON:0010316;1.63e-09;4!UBERON:0005291;1.63e-09;4!UBERON:0002050;7.25e-08;5!UBERON:0005423;7.25e-08;5!UBERON:0000002;7.17e-07;6!UBERON:0001560;7.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.58e-34,1;UBERON:0001785,2.58e-34,1;UBERON:0002464,2.58e-34,1;UBERON:0004904,2.58e-34,1;UBERON:0001021,2.58e-34,1;UBERON:0003902,2.58e-34,1;UBERON:0005425,2.58e-34,1;UBERON:0003714,6.48e-18,2;UBERON:0005162,6.48e-18,2;UBERON:0000122,6.48e-18,2;UBERON:0002331,3.97e-14,10;UBERON:0000358,3.97e-14,10;UBERON:0000307,3.97e-14,10;UBERON:0000091,3.97e-14,10;UBERON:0000087,3.97e-14,10;UBERON:0007010,3.97e-14,10;UBERON:0007806,3.97e-14,10;UBERON:0008780,3.97e-14,10;UBERON:0005728,3.97e-14,10;UBERON:0001781,1.22e-09,4;UBERON:0000002,7.17e-07,6;UBERON:0001560,7.17e-07,6;UBERON:0000966,7.58e-07,6;UBERON:0005388,7.58e-07,6;UBERON:0001802,7.58e-07,6 | |||
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| ||
|short_description=p@chr3:181495943..181495948,+ | |short_description=p@chr3:181495943..181495948,+ | ||
}} | }} |
Latest revision as of 18:38, 29 July 2015
Short description: | p@chr3:181495943..181495948, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:181495943..181495948, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.58e-34 | 1 |
cranial nerve | 2.58e-34 | 1 |
nerve trunk | 2.58e-34 | 1 |
nerve connecting eye with brain | 2.58e-34 | 1 |
nerve | 2.58e-34 | 1 |
retinal neural layer | 2.58e-34 | 1 |
presumptive neural retina | 2.58e-34 | 1 |
neural tissue | 6.48e-18 | 2 |
multi cell component structure | 6.48e-18 | 2 |
neuron projection bundle | 6.48e-18 | 2 |
umbilical cord | 3.97e-14 | 10 |
blastocyst | 3.97e-14 | 10 |
blastula | 3.97e-14 | 10 |
bilaminar disc | 3.97e-14 | 10 |
inner cell mass | 3.97e-14 | 10 |
cleaving embryo | 3.97e-14 | 10 |
connecting stalk | 3.97e-14 | 10 |
inner cell mass derived epiblast | 3.97e-14 | 10 |
extraembryonic mesoderm | 3.97e-14 | 10 |
layer of retina | 1.22e-09 | 4 |
uterine cervix | 7.17e-07 | 6 |
neck of organ | 7.17e-07 | 6 |
retina | 7.58e-07 | 6 |
photoreceptor array | 7.58e-07 | 6 |
posterior segment of eyeball | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.35e-08 | 5 |