FFCP PHASE1:Hg19::chr4:103423374..103423399,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:103423374..103423399,+ | |||
|coexpression_cluster_id=C407 | |||
|description=CAGE_peak_at_chr4:103423374..103423399,+ | |description=CAGE_peak_at_chr4:103423374..103423399,+ | ||
|id=chr4:103423374..103423399,+ | |id=chr4:103423374..103423399,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.34e-52!140;CL:0002057!7.07e-51!42;CL:0000860!1.53e-46!45;CL:0000766!1.84e-40!76;CL:0000037!1.99e-40!172;CL:0000566!1.99e-40!172;CL:0002087!4.85e-40!119;CL:0002031!2.41e-39!124;CL:0002032!9.53e-39!165;CL:0000837!9.53e-39!165;CL:0000988!6.11e-38!182;CL:0000557!2.26e-34!71;CL:0002009!6.40e-33!65;CL:0000839!3.39e-31!70;CL:0002194!2.20e-30!63;CL:0000576!2.20e-30!63;CL:0000040!2.20e-30!63;CL:0000559!2.20e-30!63;CL:0000763!1.26e-29!112;CL:0000049!1.26e-29!112;CL:0000134!1.77e-12!358;CL:0002320!8.64e-12!365;CL:0000624!2.91e-10!6;CL:0000219!7.59e-10!390;CL:0000094!8.45e-10!8;CL:0000542!1.66e-08!53;CL:0000051!1.66e-08!53;CL:0002393!2.08e-08!9;CL:0002397!2.08e-08!9;CL:0000838!6.62e-08!52;CL:0000791!1.46e-07!18;CL:0000789!1.46e-07!18;CL:0002420!1.46e-07!18;CL:0002419!1.46e-07!18;CL:0000790!1.46e-07!18;CL:0000048!1.98e-07!430;CL:0000034!2.57e-07!444;CL:0000723!4.92e-07!436;CL:0000081!9.97e-07!11 | |ontology_enrichment_celltype=CL:0000738!2.34e-52!140;CL:0002057!7.07e-51!42;CL:0000860!1.53e-46!45;CL:0000766!1.84e-40!76;CL:0000037!1.99e-40!172;CL:0000566!1.99e-40!172;CL:0002087!4.85e-40!119;CL:0002031!2.41e-39!124;CL:0002032!9.53e-39!165;CL:0000837!9.53e-39!165;CL:0000988!6.11e-38!182;CL:0000557!2.26e-34!71;CL:0002009!6.40e-33!65;CL:0000839!3.39e-31!70;CL:0002194!2.20e-30!63;CL:0000576!2.20e-30!63;CL:0000040!2.20e-30!63;CL:0000559!2.20e-30!63;CL:0000763!1.26e-29!112;CL:0000049!1.26e-29!112;CL:0000134!1.77e-12!358;CL:0002320!8.64e-12!365;CL:0000624!2.91e-10!6;CL:0000219!7.59e-10!390;CL:0000094!8.45e-10!8;CL:0000542!1.66e-08!53;CL:0000051!1.66e-08!53;CL:0002393!2.08e-08!9;CL:0002397!2.08e-08!9;CL:0000838!6.62e-08!52;CL:0000791!1.46e-07!18;CL:0000789!1.46e-07!18;CL:0002420!1.46e-07!18;CL:0002419!1.46e-07!18;CL:0000790!1.46e-07!18;CL:0000048!1.98e-07!430;CL:0000034!2.57e-07!444;CL:0000723!4.92e-07!436;CL:0000081!9.97e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.39e-37;33!CL:0002057;9.39e-37;33!CL:0000473;3.57e-25;39!CL:0000234;3.57e-25;39!CL:0000576;2.15e-21;48!CL:0000766;4.19e-17;69!CL:0002087;4.33e-17;104!CL:0000623;1.34e-13;3!CL:0000738;2.73e-13;136!CL:0000226;1.12e-12;3!CL:0000842;1.12e-12;3!CL:0000624;2.46e-11;6!CL:0000791;1.39e-10;18!CL:0000789;1.39e-10;18!CL:0002419;1.39e-10;18!CL:0000771;2.05e-09;2!CL:0001014;2.23e-09;2!CL:0001016;2.23e-09;2!CL:0000094;8.70e-09;8!CL:0000988;1.36e-07;177!CL:0000084;2.41e-07;25!CL:0002393;2.50e-07;6!CL:0002397;2.50e-07;6!CL:0000542;3.86e-07;53!CL:0000775;8.36e-07;3 | |||
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|ontology_enrichment_development_v019=CL:0002057;1.12e-30;42!CL:0000790;1.39e-10;18!CL:0000049;3.64e-07;108!CL:0000051;3.86e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.40e-30!102;UBERON:0003061!1.40e-30!102;UBERON:0002371!7.48e-29!80;UBERON:0002193!2.47e-26!112;UBERON:0001474!7.92e-26!86;UBERON:0004765!4.67e-22!101;UBERON:0001434!4.67e-22!101;UBERON:0002405!2.23e-21!115;UBERON:0002384!7.35e-11!375;UBERON:0003081!4.84e-10!216;UBERON:0002204!1.30e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!1.40e-30!102;UBERON:0003061!1.40e-30!102;UBERON:0002371!7.48e-29!80;UBERON:0002193!2.47e-26!112;UBERON:0001474!7.92e-26!86;UBERON:0004765!4.67e-22!101;UBERON:0001434!4.67e-22!101;UBERON:0002405!2.23e-21!115;UBERON:0002384!7.35e-11!375;UBERON:0003081!4.84e-10!216;UBERON:0002204!1.30e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.33e-28,98;UBERON:0003061,2.33e-28,98;UBERON:0002371,8.75e-28,76;UBERON:0001474,2.47e-25,82;UBERON:0002193,4.06e-25,108;UBERON:0002405,1.18e-23,93;UBERON:0004765,1.43e-22,90;UBERON:0001434,9.81e-20,100;UBERON:0002384,1.05e-13,371;UBERON:0003081,3.23e-11,203;UBERON:0002204,1.58e-09,167 | |||
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|short_description=p@chr4:103423374..103423399,+ | |short_description=p@chr4:103423374..103423399,+ | ||
}} | }} |
Latest revision as of 00:29, 30 July 2015
Short description: | p@chr4:103423374..103423399, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:103423374..103423399, + |
Coexpression cluster: | C407_Neutrophils_CD14_Eosinophils_Peripheral_CD19_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.33e-28 | 98 |
blood island | 2.33e-28 | 98 |
bone marrow | 8.75e-28 | 76 |
bone element | 2.47e-25 | 82 |
hemolymphoid system | 4.06e-25 | 108 |
immune system | 1.18e-23 | 93 |
skeletal element | 1.43e-22 | 90 |
skeletal system | 9.81e-20 | 100 |
connective tissue | 1.05e-13 | 371 |
lateral plate mesoderm | 3.23e-11 | 203 |
musculoskeletal system | 1.58e-09 | 167 |