FFCP PHASE1:Hg19::chr5:140208087..140208126,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:140208087..140208126,- | |||
|description=CAGE_peak_at_chr5:140208087..140208126,- | |description=CAGE_peak_at_chr5:140208087..140208126,- | ||
|id=chr5:140208087..140208126,- | |id=chr5:140208087..140208126,- | ||
|ontology_enrichment_celltype=CL:0002322!1.89e-07!5 | |ontology_enrichment_celltype=CL:0002322!1.89e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.23e-17;5!CL:0002321;3.47e-10;15!CL:0002149;6.48e-07;6!CL:0002255;6.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,7.75e-07,6;CL:0002255,7.75e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.42e-15;10!DOID:169;8.52e-15;6!DOID:3095;1.66e-10;22!DOID:2994;1.66e-10;22!DOID:6193;2.38e-10;1!DOID:3001;6.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.51e-15,10;DOID:169,9.15e-15,6;DOID:3095,1.61e-10,22;DOID:2994,1.61e-10,22;DOID:6193,4.33e-10,1;DOID:3001,7.75e-07,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003296;4.15e-21;4!UBERON:0010133;4.15e-21;4!UBERON:0001894;5.41e-21;7!UBERON:0000007;2.37e-19;2!UBERON:0000013;1.23e-17;5!UBERON:0002410;1.23e-17;5!UBERON:0002780;2.04e-10;41!UBERON:0001890;2.04e-10;41!UBERON:0007190;2.38e-10;1!UBERON:0000010;4.85e-10;8!UBERON:0002784;5.96e-10;4!UBERON:0000073;7.05e-08;53!UBERON:0002616;7.05e-08;53!UBERON:0000200;6.48e-07;6 | |||
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|short_description=p@chr5:140208087..140208126,- | |short_description=p@chr5:140208087..140208126,- | ||
}} | }} |
Latest revision as of 10:35, 30 July 2015
Short description: | p@chr5:140208087..140208126, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:140208087..140208126, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 7.75e-07 | 6 |
stromal cell of endometrium | 7.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
diencephalon | 7.04e-21 | 7 |
future diencephalon | 7.04e-21 | 7 |
gland of diencephalon | 7.98e-21 | 4 |
neuroendocrine gland | 7.98e-21 | 4 |
pituitary gland | 2.86e-19 | 2 |
sympathetic nervous system | 1.34e-17 | 5 |
autonomic nervous system | 1.34e-17 | 5 |
regional part of forebrain | 2.97e-16 | 41 |
forebrain | 2.97e-16 | 41 |
anterior neural tube | 2.97e-16 | 41 |
future forebrain | 2.97e-16 | 41 |
nervous system | 1.18e-14 | 89 |
regional part of nervous system | 2.29e-12 | 53 |
regional part of brain | 2.29e-12 | 53 |
neural tube | 1.19e-11 | 56 |
neural rod | 1.19e-11 | 56 |
future spinal cord | 1.19e-11 | 56 |
neural keel | 1.19e-11 | 56 |
pre-chordal neural plate | 1.31e-10 | 61 |
paracentral gyrus | 3.61e-10 | 1 |
peripheral nervous system | 5.09e-10 | 8 |
regional part of diencephalon | 6.84e-10 | 4 |
central nervous system | 1.99e-09 | 81 |
brain | 2.98e-09 | 68 |
future brain | 2.98e-09 | 68 |
neurectoderm | 5.76e-09 | 86 |
ectoderm-derived structure | 5.60e-08 | 171 |
ectoderm | 5.60e-08 | 171 |
presumptive ectoderm | 5.60e-08 | 171 |
neural plate | 1.32e-07 | 82 |
presumptive neural plate | 1.32e-07 | 82 |
gyrus | 6.11e-07 | 6 |
cerebral hemisphere | 8.48e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.51e-15 | 10 |
neuroendocrine tumor | 9.15e-15 | 6 |
germ cell and embryonal cancer | 1.61e-10 | 22 |
germ cell cancer | 1.61e-10 | 22 |
epithelioid sarcoma | 4.33e-10 | 1 |
female reproductive endometrioid cancer | 7.75e-07 | 6 |