FFCP PHASE1:Hg19::chr5:87988918..87988927,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:87988918..87988927,- | |||
|description=CAGE_peak_at_chr5:87988918..87988927,- | |||
|id=chr5:87988918..87988927,- | |||
|ontology_enrichment_celltype=CL:0000128!4.50e-24!7;CL:0000126!4.50e-24!7;CL:0000127!4.50e-24!7;CL:0002453!4.50e-24!7;CL:0002605!2.12e-15!3;CL:0002603!1.46e-14!3;CL:0002319!1.09e-12!25;CL:0000243!1.52e-09!15;CL:0000125!1.52e-09!15;CL:0000030!1.52e-09!15;CL:0000339!1.52e-09!15;CL:0000095!1.80e-08!17;CL:0000123!1.80e-08!17 | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.08e-27;3!CL:0000128;2.37e-12;7!CL:0000126;2.37e-12;7!CL:0000127;2.37e-12;7!CL:0002319;2.74e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.72e-27,3;CL:0000128,2.66e-12,7;CL:0000126,2.66e-12,7;CL:0000127,2.66e-12,7;CL:0002453,2.66e-12,7;CL:0002319,2.77e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000956;3.77e-48;25!UBERON:0000203;3.77e-48;25!UBERON:0002791;2.40e-35;32!UBERON:0001869;4.43e-35;32!UBERON:0001893;6.17e-35;34!UBERON:0001950;9.59e-34;20!UBERON:0003528;6.82e-31;34!UBERON:0002020;6.82e-31;34!UBERON:0002619;8.00e-31;22!UBERON:0002780;1.36e-17;41!UBERON:0001890;1.36e-17;41!UBERON:0001872;6.93e-17;5!UBERON:0002021;1.03e-16;5!UBERON:0000073;2.16e-15;53!UBERON:0002616;2.16e-15;53!UBERON:0000200;3.04e-14;6!UBERON:0001017;1.02e-12;75!UBERON:0000955;2.03e-11;68!UBERON:0002702;2.12e-11;2!UBERON:0002771;3.52e-11;2!UBERON:0001870;5.01e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.84e-48,25;UBERON:0000203,4.84e-48,25;UBERON:0002791,7.74e-38,32;UBERON:0001869,7.74e-38,32;UBERON:0003528,1.14e-35,34;UBERON:0002020,1.14e-35,34;UBERON:0001893,1.14e-35,34;UBERON:0001950,1.08e-33,20;UBERON:0002619,8.89e-31,22;UBERON:0002780,1.05e-29,41;UBERON:0001890,1.05e-29,41;UBERON:0003080,1.05e-29,41;UBERON:0006240,1.05e-29,41;UBERON:0001017,2.01e-23,81;UBERON:0000073,4.60e-23,53;UBERON:0002616,4.60e-23,53;UBERON:0000955,1.86e-22,68;UBERON:0006238,1.86e-22,68;UBERON:0001049,7.72e-22,56;UBERON:0005068,7.72e-22,56;UBERON:0006241,7.72e-22,56;UBERON:0007135,7.72e-22,56;UBERON:0001016,4.23e-21,89;UBERON:0003056,4.64e-20,61;UBERON:0001872,8.14e-17,5;UBERON:0002021,8.82e-17,5;UBERON:0003075,6.49e-15,82;UBERON:0007284,6.49e-15,82;UBERON:0002346,3.25e-14,86;UBERON:0000200,3.48e-14,6;UBERON:0010371,1.02e-11,104;UBERON:0002702,2.23e-11,2;UBERON:0002771,4.09e-11,2;UBERON:0004121,5.90e-11,171;UBERON:0000924,5.90e-11,171;UBERON:0006601,5.90e-11,171;UBERON:0010314,3.64e-09,132;UBERON:0011216,2.87e-08,223;UBERON:0001870,5.18e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0.408001382488506,0.626909442956176,2.28988789704845,1.23186982565596,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.502548796003046,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.774054819518572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22026264901963,2.3786276834235,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,1.91560630868582,0.205116364240755,0.252071696221718,0.622415272177961,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,2.48024155801421,0.887821342714695,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,0.920818829879887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.475940431336403,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:87988918..87988927,- | |||
}} |
Latest revision as of 17:07, 30 July 2015
Short description: | p@chr5:87988918..87988927, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:87988918..87988927, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.72e-27 | 3 |
oligodendrocyte | 2.66e-12 | 7 |
macroglial cell | 2.66e-12 | 7 |
astrocyte | 2.66e-12 | 7 |
oligodendrocyte precursor cell | 2.66e-12 | 7 |
neural cell | 2.77e-07 | 25 |