FFCP PHASE1:Hg19::chr6:19877308..19877326,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:19877308..19877326,- | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_at_chr6:19877308..19877326,- | |description=CAGE_peak_at_chr6:19877308..19877326,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.05e-79;2!UBERON:0006222;2.70e-40;1!UBERON:0006601;1.99e-07;82 | |ontology_enrichment_development_v019=UBERON:0010122;1.05e-79;2!UBERON:0006222;2.70e-40;1!UBERON:0006601;1.99e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!7.74e-80!4;UBERON:0002435!7.74e-80!4;UBERON:0000204!7.74e-80!4;UBERON:0010082!7.74e-80!4;UBERON:0005383!2.43e-60!3;UBERON:0005382!2.43e-60!3;UBERON:0009663!6.29e-46!7;UBERON:0001873!3.99e-41!2;UBERON:0010122!3.99e-41!2;UBERON:0002780!1.08e-37!41;UBERON:0001890!1.08e-37!41;UBERON:0006240!1.08e-37!41;UBERON:0003080!8.22e-37!42;UBERON:0002308!7.32e-36!9;UBERON:0002420!7.32e-36!9;UBERON:0000125!7.32e-36!9;UBERON:0007245!7.32e-36!9;UBERON:0010009!7.32e-36!9;UBERON:0010011!7.32e-36!9;UBERON:0000454!7.32e-36!9;UBERON:0002791!2.88e-28!33;UBERON:0001893!1.85e-27!34;UBERON:0001049!3.08e-27!57;UBERON:0005068!3.08e-27!57;UBERON:0006241!3.08e-27!57;UBERON:0007135!3.08e-27!57;UBERON:0002616!2.54e-26!59;UBERON:0003056!1.83e-25!61;UBERON:0000955!3.34e-22!69;UBERON:0006238!3.34e-22!69;UBERON:0001869!1.37e-21!32;UBERON:0001882!2.30e-21!1;UBERON:0005403!2.30e-21!1;UBERON:0001874!4.22e-21!1;UBERON:0002336!7.72e-21!1;UBERON:0001018!7.72e-21!1;UBERON:0002473!7.72e-21!1;UBERON:0005340!7.72e-21!1;UBERON:0002316!7.72e-21!1;UBERON:0003544!7.72e-21!1;UBERON:0001020!7.72e-21!1;UBERON:0005970!7.72e-21!1;UBERON:0002437!7.72e-21!1;UBERON:0002022!9.43e-21!1;UBERON:0002020!2.33e-20!34;UBERON:0003528!2.33e-20!34;UBERON:0001017!1.02e-18!82;UBERON:0003075!4.63e-18!86;UBERON:0007284!4.63e-18!86;UBERON:0005743!7.49e-18!86;UBERON:0002346!2.98e-17!90;UBERON:0000349!7.51e-17!5;UBERON:0000073!3.67e-16!94;UBERON:0001016!3.67e-16!94;UBERON:0007023!1.43e-13!115;UBERON:0000033!1.89e-12!123;UBERON:0001894!2.24e-12!7;UBERON:0006222!2.24e-12!7;UBERON:0000153!7.35e-12!129;UBERON:0007811!7.35e-12!129;UBERON:0001897!2.47e-11!2;UBERON:0001954!3.70e-11!2;UBERON:0003022!3.70e-11!2;UBERON:0002421!3.70e-11!2;UBERON:0002600!3.70e-11!2;UBERON:0005162!4.09e-11!2;UBERON:0000122!4.09e-11!2;UBERON:0004121!6.48e-09!169;UBERON:0000924!1.06e-08!173;UBERON:0006601!1.06e-08!173;UBERON:0000025!8.49e-08!194 | |ontology_enrichment_uberon=UBERON:0000369!7.74e-80!4;UBERON:0002435!7.74e-80!4;UBERON:0000204!7.74e-80!4;UBERON:0010082!7.74e-80!4;UBERON:0005383!2.43e-60!3;UBERON:0005382!2.43e-60!3;UBERON:0009663!6.29e-46!7;UBERON:0001873!3.99e-41!2;UBERON:0010122!3.99e-41!2;UBERON:0002780!1.08e-37!41;UBERON:0001890!1.08e-37!41;UBERON:0006240!1.08e-37!41;UBERON:0003080!8.22e-37!42;UBERON:0002308!7.32e-36!9;UBERON:0002420!7.32e-36!9;UBERON:0000125!7.32e-36!9;UBERON:0007245!7.32e-36!9;UBERON:0010009!7.32e-36!9;UBERON:0010011!7.32e-36!9;UBERON:0000454!7.32e-36!9;UBERON:0002791!2.88e-28!33;UBERON:0001893!1.85e-27!34;UBERON:0001049!3.08e-27!57;UBERON:0005068!3.08e-27!57;UBERON:0006241!3.08e-27!57;UBERON:0007135!3.08e-27!57;UBERON:0002616!2.54e-26!59;UBERON:0003056!1.83e-25!61;UBERON:0000955!3.34e-22!69;UBERON:0006238!3.34e-22!69;UBERON:0001869!1.37e-21!32;UBERON:0001882!2.30e-21!1;UBERON:0005403!2.30e-21!1;UBERON:0001874!4.22e-21!1;UBERON:0002336!7.72e-21!1;UBERON:0001018!7.72e-21!1;UBERON:0002473!7.72e-21!1;UBERON:0005340!7.72e-21!1;UBERON:0002316!7.72e-21!1;UBERON:0003544!7.72e-21!1;UBERON:0001020!7.72e-21!1;UBERON:0005970!7.72e-21!1;UBERON:0002437!7.72e-21!1;UBERON:0002022!9.43e-21!1;UBERON:0002020!2.33e-20!34;UBERON:0003528!2.33e-20!34;UBERON:0001017!1.02e-18!82;UBERON:0003075!4.63e-18!86;UBERON:0007284!4.63e-18!86;UBERON:0005743!7.49e-18!86;UBERON:0002346!2.98e-17!90;UBERON:0000349!7.51e-17!5;UBERON:0000073!3.67e-16!94;UBERON:0001016!3.67e-16!94;UBERON:0007023!1.43e-13!115;UBERON:0000033!1.89e-12!123;UBERON:0001894!2.24e-12!7;UBERON:0006222!2.24e-12!7;UBERON:0000153!7.35e-12!129;UBERON:0007811!7.35e-12!129;UBERON:0001897!2.47e-11!2;UBERON:0001954!3.70e-11!2;UBERON:0003022!3.70e-11!2;UBERON:0002421!3.70e-11!2;UBERON:0002600!3.70e-11!2;UBERON:0005162!4.09e-11!2;UBERON:0000122!4.09e-11!2;UBERON:0004121!6.48e-09!169;UBERON:0000924!1.06e-08!173;UBERON:0006601!1.06e-08!173;UBERON:0000025!8.49e-08!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000369;4.23e-89;4!UBERON:0002435;4.23e-89;4!UBERON:0000204;4.23e-89;4!UBERON:0001873;1.05e-79;2!UBERON:0005383;1.28e-53;3!UBERON:0005382;1.28e-53;3!UBERON:0009663;1.93e-51;7!UBERON:0001882;1.48e-40;1!UBERON:0005403;1.48e-40;1!UBERON:0002420;2.91e-40;9!UBERON:0000125;2.91e-40;9!UBERON:0007245;2.91e-40;9!UBERON:0002308;2.91e-40;9!UBERON:0010009;2.91e-40;9!UBERON:0010011;2.91e-40;9!UBERON:0000454;2.91e-40;9!UBERON:0001894;2.02e-23;7!UBERON:0002780;1.54e-22;41!UBERON:0001890;1.54e-22;41!UBERON:0001897;6.30e-21;2!UBERON:0010225;6.30e-21;2!UBERON:0000073;4.24e-13;53!UBERON:0002616;4.24e-13;53!UBERON:0002791;4.20e-12;32!UBERON:0001869;4.20e-12;32!UBERON:0003528;1.85e-11;34!UBERON:0002020;1.85e-11;34!UBERON:0002784;3.60e-11;4!UBERON:0000955;4.84e-11;68!UBERON:0001893;8.15e-11;34!UBERON:0001017;1.57e-10;75!UBERON:0000349;2.97e-09;5!UBERON:0001016;7.80e-08;83!UBERON:0007023;2.91e-07;114 | |ontology_enrichment_uberon_v019=UBERON:0000369;4.23e-89;4!UBERON:0002435;4.23e-89;4!UBERON:0000204;4.23e-89;4!UBERON:0001873;1.05e-79;2!UBERON:0005383;1.28e-53;3!UBERON:0005382;1.28e-53;3!UBERON:0009663;1.93e-51;7!UBERON:0001882;1.48e-40;1!UBERON:0005403;1.48e-40;1!UBERON:0002420;2.91e-40;9!UBERON:0000125;2.91e-40;9!UBERON:0007245;2.91e-40;9!UBERON:0002308;2.91e-40;9!UBERON:0010009;2.91e-40;9!UBERON:0010011;2.91e-40;9!UBERON:0000454;2.91e-40;9!UBERON:0001894;2.02e-23;7!UBERON:0002780;1.54e-22;41!UBERON:0001890;1.54e-22;41!UBERON:0001897;6.30e-21;2!UBERON:0010225;6.30e-21;2!UBERON:0000073;4.24e-13;53!UBERON:0002616;4.24e-13;53!UBERON:0002791;4.20e-12;32!UBERON:0001869;4.20e-12;32!UBERON:0003528;1.85e-11;34!UBERON:0002020;1.85e-11;34!UBERON:0002784;3.60e-11;4!UBERON:0000955;4.84e-11;68!UBERON:0001893;8.15e-11;34!UBERON:0001017;1.57e-10;75!UBERON:0000349;2.97e-09;5!UBERON:0001016;7.80e-08;83!UBERON:0007023;2.91e-07;114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,4.23e-89,4;UBERON:0002435,4.23e-89,4;UBERON:0000204,4.23e-89,4;UBERON:0010082,4.23e-89,4;UBERON:0001873,1.05e-79,2;UBERON:0010122,1.05e-79,2;UBERON:0005383,1.28e-53,3;UBERON:0005382,1.28e-53,3;UBERON:0009663,1.93e-51,7;UBERON:0001882,1.48e-40,1;UBERON:0005403,1.48e-40,1;UBERON:0002420,2.91e-40,9;UBERON:0000125,2.91e-40,9;UBERON:0007245,2.91e-40,9;UBERON:0002308,2.91e-40,9;UBERON:0010009,2.91e-40,9;UBERON:0010011,2.91e-40,9;UBERON:0000454,2.91e-40,9;UBERON:0002780,4.07e-24,41;UBERON:0001890,4.07e-24,41;UBERON:0003080,4.07e-24,41;UBERON:0006240,4.07e-24,41;UBERON:0001894,2.02e-23,7;UBERON:0006222,2.02e-23,7;UBERON:0001897,5.70e-21,2;UBERON:0010225,5.70e-21,2;UBERON:0000073,6.22e-19,53;UBERON:0002616,6.22e-19,53;UBERON:0001049,5.63e-18,56;UBERON:0005068,5.63e-18,56;UBERON:0006241,5.63e-18,56;UBERON:0007135,5.63e-18,56;UBERON:0003056,1.38e-16,61;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0001017,1.45e-12,81;UBERON:0003075,1.45e-12,82;UBERON:0007284,1.45e-12,82;UBERON:0002346,5.13e-12,86;UBERON:0002791,1.15e-11,32;UBERON:0001869,1.15e-11,32;UBERON:0001016,2.13e-11,89;UBERON:0002784,3.42e-11,4;UBERON:0003528,4.78e-11,34;UBERON:0002020,4.78e-11,34;UBERON:0001893,4.78e-11,34;UBERON:0010371,4.61e-10,104;UBERON:0007023,2.58e-09,114;UBERON:0000349,2.97e-09,5;UBERON:0010314,4.60e-08,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08593108651071,11.81845098529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.134802265961354,0,2.34264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97331793397074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79269088827117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08593108651071,11.81845098529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.134802265961354,0,2.34264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97331793397074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79269088827117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:19877308..19877326,- | |short_description=p@chr6:19877308..19877326,- | ||
}} | }} |
Latest revision as of 22:33, 30 July 2015
Short description: | p@chr6:19877308..19877326, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:19877308..19877326, - |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data