FFCP PHASE1:Hg19::chr7:27157970..27157995,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:27157970..27157995,-
|short_description=p@chr7:27157970..27157995,-
|description=CAGE_peak_at_chr7:27157970..27157995,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:27157970..27157995,- | |||
|coexpression_cluster_id=C4678 | |||
|description=CAGE_peak_at_chr7:27157970..27157995,- | |||
|id=chr7:27157970..27157995,- | |||
|ontology_enrichment_celltype=CL:1000497!6.13e-13!18;CL:0002518!6.13e-13!18;CL:1000449!1.38e-12!16;CL:1000507!2.25e-12!12;CL:1000494!2.25e-12!12;CL:0000192!4.01e-10!42;CL:0000514!4.01e-10!42;CL:0000183!1.04e-08!59;CL:0002681!1.08e-08!13;CL:0002584!1.08e-08!13;CL:0000187!4.95e-08!54;CL:0000393!2.59e-07!60;CL:0000211!2.59e-07!60;CL:0000680!2.72e-07!57;CL:0000056!2.72e-07!57;CL:0000355!2.72e-07!57;CL:0002539!3.93e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.71e-26;10!CL:1000494;2.71e-26;10!CL:1000497;3.46e-26;17!CL:0002518;3.46e-26;17!CL:1000449;5.23e-25;15!CL:0002681;1.90e-16;12!CL:0002584;1.90e-16;12!CL:0002579;7.43e-11;3!CL:0000192;2.30e-08;43!CL:0002539;2.85e-08;10!CL:0000650;7.34e-08;2!CL:1000500;7.34e-08;2!CL:1000618;7.34e-08;2!CL:1001318;7.34e-08;2!CL:0002173;7.34e-08;2!CL:1000746;1.05e-07;7!CL:1000612;1.05e-07;7!CL:0002598;2.89e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.87e-26,17;CL:0002518,1.87e-26,17;CL:1000507,1.94e-26,10;CL:1000494,1.94e-26,10;CL:1000449,2.93e-25,15;CL:0002681,1.44e-16,12;CL:0002584,1.44e-16,12;CL:0002579,7.46e-11,3;CL:0000192,2.06e-10,43;CL:0000514,2.06e-10,43;CL:0002539,1.90e-08,10;CL:0000650,5.79e-08,2;CL:1000500,5.79e-08,2;CL:1000618,5.79e-08,2;CL:1001318,5.79e-08,2;CL:0002173,5.79e-08,2;CL:1000746,7.31e-08,7;CL:1000612,7.31e-08,7;CL:0000187,1.59e-07,55;CL:0000222,3.05e-07,121;CL:0002598,3.41e-07,2;CL:0000680,5.38e-07,58;CL:0000056,5.38e-07,58;CL:0000355,5.38e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;2.30e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;2.71e-26;10!UBERON:0009773;2.71e-26;10!UBERON:0001231;2.71e-26;10!UBERON:0004810;2.71e-26;10!UBERON:0006555;5.23e-25;15!UBERON:0004819;5.23e-25;15!UBERON:0001285;5.23e-25;15!UBERON:0007684;5.23e-25;15!UBERON:0002113;9.66e-18;24!UBERON:0011143;9.66e-18;24!UBERON:0001225;1.90e-16;12!UBERON:0008987;1.90e-16;12!UBERON:0000489;3.26e-14;29!UBERON:0006554;1.19e-13;30!UBERON:0001008;1.19e-13;30!UBERON:0001851;6.93e-13;15!UBERON:0000353;6.93e-13;15!UBERON:0002417;3.94e-09;58!UBERON:0000916;3.94e-09;58!UBERON:0003688;4.13e-09;6!UBERON:0002358;4.13e-09;6!UBERON:0003684;4.13e-09;6!UBERON:0001178;4.13e-09;6!UBERON:0004237;2.85e-08;10!UBERON:0004695;2.85e-08;10!UBERON:0002111;2.85e-08;10!UBERON:0004178;2.85e-08;10!UBERON:0003567;7.34e-08;2!UBERON:0003838;7.34e-08;2!UBERON:0003586;7.34e-08;2!UBERON:0005169;7.34e-08;2!UBERON:0002321;7.34e-08;2!UBERON:0005215;7.34e-08;2!UBERON:0002303;7.34e-08;2!UBERON:0002319;7.34e-08;2!UBERON:0000074;1.05e-07;7!UBERON:0001229;1.05e-07;7!UBERON:0003914;1.32e-07;74!UBERON:0007196;1.71e-07;15!UBERON:0001558;1.71e-07;15!UBERON:0005177;4.24e-07;99!UBERON:0009569;8.11e-07;110!UBERON:0005172;8.17e-07;52!UBERON:0005173;8.17e-07;52 | |||
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| ||
|short_description=p@chr7:27157970..27157995,- | |||
}} | }} |
Latest revision as of 09:01, 31 July 2015
Short description: | p@chr7:27157970..27157995, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:27157970..27157995, - |
Coexpression cluster: | C4678_Smooth_Mesothelial_glioma_mesenchymal_Renal_liposarcoma_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.87e-26 | 17 |
kidney epithelial cell | 1.87e-26 | 17 |
kidney tubule cell | 1.94e-26 | 10 |
nephron tubule epithelial cell | 1.94e-26 | 10 |
epithelial cell of nephron | 2.93e-25 | 15 |
kidney cortical cell | 1.44e-16 | 12 |
renal cortical epithelial cell | 1.44e-16 | 12 |
omentum preadipocyte | 7.46e-11 | 3 |
smooth muscle cell | 2.06e-10 | 43 |
smooth muscle myoblast | 2.06e-10 | 43 |
aortic smooth muscle cell | 1.90e-08 | 10 |
mesangial cell | 5.79e-08 | 2 |
kidney interstitial cell | 5.79e-08 | 2 |
juxtaglomerular complex cell | 5.79e-08 | 2 |
renal interstitial pericyte | 5.79e-08 | 2 |
extraglomerular mesangial cell | 5.79e-08 | 2 |
glomerular cell | 7.31e-08 | 7 |
kidney corpuscule cell | 7.31e-08 | 7 |
muscle cell | 1.59e-07 | 55 |
mesodermal cell | 3.05e-07 | 121 |
bronchial smooth muscle cell | 3.41e-07 | 2 |
muscle precursor cell | 5.38e-07 | 58 |
myoblast | 5.38e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.38e-07 | 58 |