FFCP PHASE1:Hg19::chr9:112260040..112260045,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:112260040..112260045,+
|short_description=p@chr9:112260040..112260045,+
|description=CAGE_peak_at_chr9:112260040..112260045,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:112260040..112260045,+ | |||
|description=CAGE_peak_at_chr9:112260040..112260045,+ | |||
|id=chr9:112260040..112260045,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.10e-18!254;CL:1000507!8.55e-14!12;CL:1000494!8.55e-14!12;CL:1000449!1.02e-11!16;CL:1000497!4.68e-10!18;CL:0002518!4.68e-10!18;CL:0002681!9.67e-08!13;CL:0002584!9.67e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;8.08e-45;10!CL:1000494;8.08e-45;10!CL:1000449;7.75e-30;15!CL:0000650;2.45e-26;2!CL:1000500;2.45e-26;2!CL:1000618;2.45e-26;2!CL:1001318;2.45e-26;2!CL:0002173;2.45e-26;2!CL:1000497;2.63e-26;17!CL:0002518;2.63e-26;17!CL:0002681;5.91e-17;12!CL:0002584;5.91e-17;12!CL:0000669;1.11e-13;4!CL:1000746;3.33e-08;7!CL:1000612;3.33e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.97e-45,10;CL:1000494,6.97e-45,10;CL:1000449,7.03e-30,15;CL:1000497,2.41e-26,17;CL:0002518,2.41e-26,17;CL:0000650,2.78e-26,2;CL:1000500,2.78e-26,2;CL:1000618,2.78e-26,2;CL:1001318,2.78e-26,2;CL:0002173,2.78e-26,2;CL:0002681,5.67e-17,12;CL:0002584,5.67e-17,12;CL:0000669,1.18e-13,4;CL:1000746,3.45e-08,7;CL:1000612,3.45e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.75e-07;2 | |||
|ontology_enrichment_disease=DOID:305!2.22e-13!106;DOID:0050687!1.94e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:4074;1.75e-07;2!DOID:4905;1.75e-07;2!DOID:3498;1.75e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.28e-07,2;DOID:4905,1.28e-07,2;DOID:3498,1.28e-07,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;8.08e-45;10!UBERON:0009773;8.08e-45;10!UBERON:0001231;8.08e-45;10!UBERON:0004810;8.08e-45;10!UBERON:0006555;7.75e-30;15!UBERON:0004819;7.75e-30;15!UBERON:0001285;7.75e-30;15!UBERON:0007684;7.75e-30;15!UBERON:0003567;2.45e-26;2!UBERON:0003838;2.45e-26;2!UBERON:0003586;2.45e-26;2!UBERON:0005169;2.45e-26;2!UBERON:0002321;2.45e-26;2!UBERON:0005215;2.45e-26;2!UBERON:0002303;2.45e-26;2!UBERON:0002319;2.45e-26;2!UBERON:0002113;5.17e-25;24!UBERON:0011143;5.17e-25;24!UBERON:0000489;1.28e-20;29!UBERON:0006554;6.47e-20;30!UBERON:0001008;6.47e-20;30!UBERON:0001225;5.91e-17;12!UBERON:0008987;5.91e-17;12!UBERON:0001301;1.10e-13;1!UBERON:0003891;1.11e-13;4!UBERON:0001851;1.26e-13;15!UBERON:0000353;1.26e-13;15!UBERON:0005172;2.62e-08;52!UBERON:0005173;2.62e-08;52!UBERON:0000074;3.33e-08;7!UBERON:0001229;3.33e-08;7!UBERON:0005177;7.91e-08;99 | |||
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| ||
|short_description=p@chr9:112260040..112260045,+ | |||
}} | }} |
Latest revision as of 21:35, 31 July 2015
Short description: | p@chr9:112260040..112260045, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:112260040..112260045, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.97e-45 | 10 |
nephron tubule epithelial cell | 6.97e-45 | 10 |
epithelial cell of nephron | 7.03e-30 | 15 |
kidney cell | 2.41e-26 | 17 |
kidney epithelial cell | 2.41e-26 | 17 |
mesangial cell | 2.78e-26 | 2 |
kidney interstitial cell | 2.78e-26 | 2 |
juxtaglomerular complex cell | 2.78e-26 | 2 |
renal interstitial pericyte | 2.78e-26 | 2 |
extraglomerular mesangial cell | 2.78e-26 | 2 |
kidney cortical cell | 5.67e-17 | 12 |
renal cortical epithelial cell | 5.67e-17 | 12 |
pericyte cell | 1.18e-13 | 4 |
glomerular cell | 3.45e-08 | 7 |
kidney corpuscule cell | 3.45e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.28e-07 | 2 |
pancreatic carcinoma | 1.28e-07 | 2 |
pancreatic ductal adenocarcinoma | 1.28e-07 | 2 |