FFCP PHASE1:Hg19::chr9:132890689..132890715,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:132890689..132890715,+ | |||
|coexpression_cluster_id=C616 | |||
|description=CAGE_peak_at_chr9:132890689..132890715,+ | |description=CAGE_peak_at_chr9:132890689..132890715,+ | ||
|id=chr9:132890689..132890715,+ | |id=chr9:132890689..132890715,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.91e-81!140;CL:0002031!2.04e-76!124;CL:0002087!1.09e-74!119;CL:0000037!2.12e-71!172;CL:0000566!2.12e-71!172;CL:0000988!4.40e-71!182;CL:0002032!6.75e-70!165;CL:0000837!6.75e-70!165;CL:0000860!3.20e-54!45;CL:0000766!3.34e-54!76;CL:0000839!7.65e-53!70;CL:0002057!9.17e-52!42;CL:0000557!7.21e-50!71;CL:0002194!1.39e-46!63;CL:0000576!1.39e-46!63;CL:0000040!1.39e-46!63;CL:0000559!1.39e-46!63;CL:0002009!1.20e-44!65;CL:0000763!3.24e-43!112;CL:0000049!3.24e-43!112;CL:0000838!3.31e-23!52;CL:0000542!1.46e-22!53;CL:0000051!1.46e-22!53;CL:0000134!1.07e-20!358;CL:0002320!9.77e-20!365;CL:0000084!2.67e-19!25;CL:0000827!2.67e-19!25;CL:0000219!7.94e-19!390;CL:0000791!3.39e-16!18;CL:0000789!3.39e-16!18;CL:0002420!3.39e-16!18;CL:0002419!3.39e-16!18;CL:0000790!3.39e-16!18;CL:0000048!1.85e-12!430;CL:0000723!6.53e-12!436;CL:0000034!8.58e-12!444;CL:0000624!1.22e-09!6;CL:0000080!1.80e-09!6;CL:0000625!5.68e-08!11;CL:0002274!8.83e-08!5;CL:0000457!8.83e-08!5;CL:0002191!8.83e-08!5;CL:0000097!8.83e-08!5;CL:0000831!8.83e-08!5;CL:0002028!8.83e-08!5;CL:0002393!5.10e-07!9;CL:0002397!5.10e-07!9 | |ontology_enrichment_celltype=CL:0000738!9.91e-81!140;CL:0002031!2.04e-76!124;CL:0002087!1.09e-74!119;CL:0000037!2.12e-71!172;CL:0000566!2.12e-71!172;CL:0000988!4.40e-71!182;CL:0002032!6.75e-70!165;CL:0000837!6.75e-70!165;CL:0000860!3.20e-54!45;CL:0000766!3.34e-54!76;CL:0000839!7.65e-53!70;CL:0002057!9.17e-52!42;CL:0000557!7.21e-50!71;CL:0002194!1.39e-46!63;CL:0000576!1.39e-46!63;CL:0000040!1.39e-46!63;CL:0000559!1.39e-46!63;CL:0002009!1.20e-44!65;CL:0000763!3.24e-43!112;CL:0000049!3.24e-43!112;CL:0000838!3.31e-23!52;CL:0000542!1.46e-22!53;CL:0000051!1.46e-22!53;CL:0000134!1.07e-20!358;CL:0002320!9.77e-20!365;CL:0000084!2.67e-19!25;CL:0000827!2.67e-19!25;CL:0000219!7.94e-19!390;CL:0000791!3.39e-16!18;CL:0000789!3.39e-16!18;CL:0002420!3.39e-16!18;CL:0002419!3.39e-16!18;CL:0000790!3.39e-16!18;CL:0000048!1.85e-12!430;CL:0000723!6.53e-12!436;CL:0000034!8.58e-12!444;CL:0000624!1.22e-09!6;CL:0000080!1.80e-09!6;CL:0000625!5.68e-08!11;CL:0002274!8.83e-08!5;CL:0000457!8.83e-08!5;CL:0002191!8.83e-08!5;CL:0000097!8.83e-08!5;CL:0000831!8.83e-08!5;CL:0002028!8.83e-08!5;CL:0002393!5.10e-07!9;CL:0002397!5.10e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.07e-58;33!CL:0002057;3.07e-58;33!CL:0000473;5.65e-40;39!CL:0000234;5.65e-40;39!CL:0000576;4.62e-31;48!CL:0000766;5.36e-26;69!CL:0002087;5.92e-20;104!CL:0000624;8.61e-17;6!CL:0000084;5.40e-14;25!CL:0000763;5.04e-12;100!CL:0000791;8.29e-12;18!CL:0000789;8.29e-12;18!CL:0002419;8.29e-12;18!CL:0000738;1.12e-11;136!CL:0000988;8.30e-11;177!CL:0000623;1.07e-10;3!CL:0000767;1.64e-09;3!CL:0000097;2.78e-09;5!CL:0000226;3.67e-09;3!CL:0000842;3.67e-09;3!CL:0000898;3.83e-09;3!CL:0000542;1.30e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.32e-60,42;CL:0002057,2.32e-60,42;CL:0000738,1.02e-59,136;CL:0002087,1.94e-54,115;CL:0002031,6.68e-54,120;CL:0000988,6.01e-52,177;CL:0000473,1.05e-51,48;CL:0000234,1.05e-51,48;CL:0000037,1.86e-49,168;CL:0000766,7.57e-49,72;CL:0002032,4.22e-46,161;CL:0000837,4.22e-46,161;CL:0000839,4.72e-45,66;CL:0000557,3.02e-44,67;CL:0002194,1.33e-39,59;CL:0000576,1.33e-39,59;CL:0000040,1.33e-39,59;CL:0000559,1.33e-39,59;CL:0002009,4.84e-38,61;CL:0000763,8.25e-33,108;CL:0000049,8.25e-33,108;CL:0000624,1.10e-16,6;CL:0000134,3.79e-16,354;CL:0002320,1.45e-15,361;CL:0000084,5.62e-14,25;CL:0000827,5.62e-14,25;CL:0000219,1.65e-13,386;CL:0000838,4.66e-12,52;CL:0000791,9.38e-12,18;CL:0000789,9.38e-12,18;CL:0002420,9.38e-12,18;CL:0002419,9.38e-12,18;CL:0000790,9.38e-12,18;CL:0000542,9.45e-12,53;CL:0000051,9.45e-12,53;CL:0000048,5.24e-11,427;CL:0000034,6.30e-11,441;CL:0000623,1.07e-10,3;CL:0000825,1.07e-10,3;CL:0000723,1.16e-10,433;CL:0000767,1.48e-09,3;CL:0000226,2.79e-09,3;CL:0000842,2.79e-09,3;CL:0000097,3.17e-09,5;CL:0002028,3.17e-09,5;CL:0000898,4.41e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.47e-45;42!CL:0000790;8.29e-12;18!CL:0000049;1.18e-08;108!CL:0000051;1.30e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.14e-45!102;UBERON:0003061!4.14e-45!102;UBERON:0002371!3.10e-42!80;UBERON:0002193!1.27e-40!112;UBERON:0001474!4.83e-38!86;UBERON:0004765!4.10e-31!101;UBERON:0001434!4.10e-31!101;UBERON:0002405!1.10e-28!115;UBERON:0002384!4.88e-19!375;UBERON:0003081!2.39e-12!216;UBERON:0002204!2.72e-12!167 | |ontology_enrichment_uberon=UBERON:0002390!4.14e-45!102;UBERON:0003061!4.14e-45!102;UBERON:0002371!3.10e-42!80;UBERON:0002193!1.27e-40!112;UBERON:0001474!4.83e-38!86;UBERON:0004765!4.10e-31!101;UBERON:0001434!4.10e-31!101;UBERON:0002405!1.10e-28!115;UBERON:0002384!4.88e-19!375;UBERON:0003081!2.39e-12!216;UBERON:0002204!2.72e-12!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.13e-41,98;UBERON:0003061,1.13e-41,98;UBERON:0002371,6.15e-38,76;UBERON:0002193,8.08e-37,108;UBERON:0001474,1.70e-34,82;UBERON:0002405,2.39e-31,93;UBERON:0004765,1.29e-30,90;UBERON:0001434,1.22e-26,100;UBERON:0002384,9.09e-15,371;UBERON:0003081,1.31e-14,203;UBERON:0002204,2.27e-12,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.328402357799783,0.157421562627358,11.4075640286182,6.90892916574983,2.63187409637329,0,0,0,0,0,0,1.66198622559563,6.21687787157439,4.55722828503289,0,0.32389366601898,0.257575567634187,0.726991193897824,2.26725566213286,0.727752183563449,2.78914844286822,9.45686142450199,9.29119112685311,9.20615655430881,15.369642391746,21.2834006899727,3.44745680736619,11.6187243045089,2.70852973188684,3.38836211176688,7.64137220161968,7.41587498668779,10.4068523406107,20.53945773287,14.0654167675789,1.31940520074686,3.98927315243264,4.68847225585964,4.35313857942876,6.24123747160254,6.22822248995575,12.3111845975804,16.6874533894464,30.1892494140112,1.81619850790011,13.6262725315399,10.1267963981083,0.211255286311942,0,0.628975936525128,0.336985893439485,0.300353785683013,0.32145117339416,0,0.59675003159727,0.182664153764634,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,5.28513470433845,1.91136614062614,0,7.28661131875997,0,2.16380747125216,7.8602152549833,5.55124047298675,0.167186495390678,1.30368906653436,1.4203434172042,0,3.23090324967003,6.18672405697158,2.87994062958707,3.79125409271022,0.640456598628376,1.69077151827842,0.328875809207352,0.552700035571697,0.289803085735052,0,0,0,0.793165398882963,5.74830740402882,3.09264700934367,4.80737414837055,0.95569624297229,0,0.950452044448374,0.602300476311091,0.511946444617674,0,0.710331756132051,0,19.7574608360238,20.8603352711136,11.0066546950927,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0.324547393654683,0,0.26591592103773,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0,0,0,0,14.2872338989824,0.264145302039678,3.52457796419313,1.00883967391873,2.39860623510122,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,22.8555681834236,29.7566053306134,26.0536363647889,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,2.89475236572042,6.68714022537712,3.94891963872744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0.191505370132367,1.48171507906718,0,0,0.228234679033192,0,0,0,0.642352300414798,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,1.97764649072111,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26173241548684,2.34771483998355,2.61054873763638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62887354279315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0.163565394255844,0,0,0,1.59989916683944,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.328402357799783,0.157421562627358,11.4075640286182,6.90892916574983,2.63187409637329,0,0,0,0,0,0,1.66198622559563,6.21687787157439,4.55722828503289,0,0.32389366601898,0.257575567634187,0.726991193897824,2.26725566213286,0.727752183563449,2.78914844286822,9.45686142450199,9.29119112685311,9.20615655430881,15.369642391746,21.2834006899727,3.44745680736619,11.6187243045089,2.70852973188684,3.38836211176688,7.64137220161968,7.41587498668779,10.4068523406107,20.53945773287,14.0654167675789,1.31940520074686,3.98927315243264,4.68847225585964,4.35313857942876,6.24123747160254,6.22822248995575,12.3111845975804,16.6874533894464,30.1892494140112,1.81619850790011,13.6262725315399,10.1267963981083,0.211255286311942,0,0.628975936525128,0.336985893439485,0.300353785683013,0.32145117339416,0,0.59675003159727,0.182664153764634,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,5.28513470433845,1.91136614062614,0,7.28661131875997,0,2.16380747125216,7.8602152549833,5.55124047298675,0.167186495390678,1.30368906653436,1.4203434172042,0,3.23090324967003,6.18672405697158,2.87994062958707,3.79125409271022,0.640456598628376,1.69077151827842,0.328875809207352,0.552700035571697,0.289803085735052,0,0,0,0.793165398882963,5.74830740402882,3.09264700934367,4.80737414837055,0.95569624297229,0,0.950452044448374,0.602300476311091,0.511946444617674,0,0.710331756132051,0,19.7574608360238,20.8603352711136,11.0066546950927,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0.324547393654683,0,0.26591592103773,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0,0,0,0,14.2872338989824,0.264145302039678,3.52457796419313,1.00883967391873,2.39860623510122,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,22.8555681834236,29.7566053306134,26.0536363647889,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,2.89475236572042,6.68714022537712,3.94891963872744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0.191505370132367,1.48171507906718,0,0,0.228234679033192,0,0,0,0.642352300414798,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,1.97764649072111,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26173241548684,2.34771483998355,2.61054873763638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62887354279315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0.163565394255844,0,0,0,1.59989916683944,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr9:132890689..132890715,+ | |short_description=p@chr9:132890689..132890715,+ | ||
}} | }} |
Latest revision as of 23:32, 31 July 2015
Short description: | p@chr9:132890689..132890715, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:132890689..132890715, + |
Coexpression cluster: | C616_CD14_Natural_CD8_Basophils_Mast_Eosinophils_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.13e-41 | 98 |
blood island | 1.13e-41 | 98 |
bone marrow | 6.15e-38 | 76 |
hemolymphoid system | 8.08e-37 | 108 |
bone element | 1.70e-34 | 82 |
immune system | 2.39e-31 | 93 |
skeletal element | 1.29e-30 | 90 |
skeletal system | 1.22e-26 | 100 |
connective tissue | 9.09e-15 | 371 |
lateral plate mesoderm | 1.31e-14 | 203 |
musculoskeletal system | 2.27e-12 | 167 |