FFCP PHASE1:Hg19::chr9:6257179..6257191,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:6257179..6257191,+ | |||
|coexpression_cluster_id=C1289 | |coexpression_cluster_id=C1289 | ||
|description=CAGE_peak_at_chr9:6257179..6257191,+ | |description=CAGE_peak_at_chr9:6257179..6257191,+ | ||
|id=chr9:6257179..6257191,+ | |id=chr9:6257179..6257191,+ | ||
|ontology_enrichment_celltype=CL:0002494!8.14e-16!16;CL:0002595!3.83e-11!5;CL:0000359!1.97e-09!32;CL:0000192!1.39e-08!42;CL:0000514!1.39e-08!42;CL:0000569!2.60e-08!4;CL:0000011!2.60e-08!4;CL:0000187!9.04e-08!54;CL:0000393!1.69e-07!60;CL:0000211!1.69e-07!60;CL:0000680!3.98e-07!57;CL:0000056!3.98e-07!57;CL:0000355!3.98e-07!57;CL:0002622!9.46e-07!3;CL:0000183!9.75e-07!59 | |ontology_enrichment_celltype=CL:0002494!8.14e-16!16;CL:0002595!3.83e-11!5;CL:0000359!1.97e-09!32;CL:0000192!1.39e-08!42;CL:0000514!1.39e-08!42;CL:0000569!2.60e-08!4;CL:0000011!2.60e-08!4;CL:0000187!9.04e-08!54;CL:0000393!1.69e-07!60;CL:0000211!1.69e-07!60;CL:0000680!3.98e-07!57;CL:0000056!3.98e-07!57;CL:0000355!3.98e-07!57;CL:0002622!9.46e-07!3;CL:0000183!9.75e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002595;2.03e-25;5!CL:0002593;5.73e-17;2!CL:0000511;3.98e-09;1!CL:0002625;3.98e-09;1!CL:0000216;3.98e-09;1!CL:0000134;2.56e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,2.89e-25,5;CL:0002593,7.02e-17,2;CL:0000511,3.53e-09,1;CL:0002625,3.53e-09,1;CL:0000216,3.53e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.16e-09;1!UBERON:0005425;3.98e-09;1!UBERON:0005795;6.59e-08;10 | |||
|ontology_enrichment_disease=DOID:2394!6.67e-21!14;DOID:120!3.04e-09!27;DOID:193!2.16e-08!29;DOID:0060084!9.00e-08!3;DOID:127!9.00e-08!3 | |ontology_enrichment_disease=DOID:2394!6.67e-21!14;DOID:120!3.04e-09!27;DOID:193!2.16e-08!29;DOID:0060084!9.00e-08!3;DOID:127!9.00e-08!3 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.22e-56;14!DOID:120;2.74e-28;27!DOID:193;3.12e-26;29!DOID:0060084;4.20e-25;3!DOID:127;4.20e-25;3!DOID:0060072;5.46e-19;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.53e-56,14;DOID:120,2.34e-28,27;DOID:193,2.69e-26,29;DOID:0060084,3.57e-25,3;DOID:127,3.57e-25,3;DOID:0060072,4.84e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0004872!9.40e-18!84;UBERON:0000948!2.37e-15!24;UBERON:0005498!2.37e-15!24;UBERON:0004140!2.37e-15!24;UBERON:0009881!2.37e-15!24;UBERON:0004141!2.37e-15!24;UBERON:0003084!2.37e-15!24;UBERON:0007005!2.37e-15!24;UBERON:0004139!2.37e-15!24;UBERON:0004291!2.37e-15!24;UBERON:0000992!3.39e-15!13;UBERON:0005156!6.25e-15!59;UBERON:0000990!6.25e-15!59;UBERON:0007100!3.43e-13!27;UBERON:0000991!2.89e-12!21;UBERON:0009196!2.89e-12!21;UBERON:0009117!2.89e-12!21;UBERON:0005564!2.89e-12!21;UBERON:0002118!1.24e-11!5;UBERON:0004532!1.24e-11!5;UBERON:0004176!1.46e-11!22;UBERON:0003834!3.83e-11!5;UBERON:0001533!3.83e-11!5;UBERON:0001637!6.75e-11!42;UBERON:0003509!6.75e-11!42;UBERON:0004572!6.75e-11!42;UBERON:0003133!8.15e-11!48;UBERON:0003134!1.14e-10!37;UBERON:0000474!1.14e-10!37;UBERON:0004573!2.07e-10!33;UBERON:0004571!2.07e-10!33;UBERON:0003914!5.56e-10!118;UBERON:0004535!1.28e-09!110;UBERON:0000477!1.38e-09!286;UBERON:0002119!2.02e-09!4;UBERON:0004531!2.02e-09!4;UBERON:0003100!3.28e-09!41;UBERON:0001009!3.78e-09!113;UBERON:0004111!3.80e-09!241;UBERON:0001981!5.43e-09!60;UBERON:0007500!5.43e-09!60;UBERON:0004537!5.43e-09!60;UBERON:0006965!5.43e-09!60;UBERON:0001048!7.83e-08!168;UBERON:0004458!8.93e-08!49;UBERON:0002050!1.14e-07!605;UBERON:0005423!1.14e-07!605;UBERON:0000025!1.39e-07!194;UBERON:0002323!1.68e-07!46;UBERON:0000922!2.53e-07!612;UBERON:0000483!3.21e-07!309;UBERON:0000923!3.25e-07!604;UBERON:0005291!3.25e-07!604;UBERON:0006598!3.25e-07!604;UBERON:0002532!3.25e-07!604;UBERON:0004122!3.79e-07!15;UBERON:0000055!3.83e-07!69;UBERON:0000119!5.06e-07!312;UBERON:0002385!6.82e-07!63;UBERON:0001015!6.82e-07!63;UBERON:0000383!6.82e-07!63;UBERON:0000926!8.04e-07!448;UBERON:0004120!8.04e-07!448;UBERON:0006603!8.04e-07!448;UBERON:0003513!9.66e-07!8 | |ontology_enrichment_uberon=UBERON:0004872!9.40e-18!84;UBERON:0000948!2.37e-15!24;UBERON:0005498!2.37e-15!24;UBERON:0004140!2.37e-15!24;UBERON:0009881!2.37e-15!24;UBERON:0004141!2.37e-15!24;UBERON:0003084!2.37e-15!24;UBERON:0007005!2.37e-15!24;UBERON:0004139!2.37e-15!24;UBERON:0004291!2.37e-15!24;UBERON:0000992!3.39e-15!13;UBERON:0005156!6.25e-15!59;UBERON:0000990!6.25e-15!59;UBERON:0007100!3.43e-13!27;UBERON:0000991!2.89e-12!21;UBERON:0009196!2.89e-12!21;UBERON:0009117!2.89e-12!21;UBERON:0005564!2.89e-12!21;UBERON:0002118!1.24e-11!5;UBERON:0004532!1.24e-11!5;UBERON:0004176!1.46e-11!22;UBERON:0003834!3.83e-11!5;UBERON:0001533!3.83e-11!5;UBERON:0001637!6.75e-11!42;UBERON:0003509!6.75e-11!42;UBERON:0004572!6.75e-11!42;UBERON:0003133!8.15e-11!48;UBERON:0003134!1.14e-10!37;UBERON:0000474!1.14e-10!37;UBERON:0004573!2.07e-10!33;UBERON:0004571!2.07e-10!33;UBERON:0003914!5.56e-10!118;UBERON:0004535!1.28e-09!110;UBERON:0000477!1.38e-09!286;UBERON:0002119!2.02e-09!4;UBERON:0004531!2.02e-09!4;UBERON:0003100!3.28e-09!41;UBERON:0001009!3.78e-09!113;UBERON:0004111!3.80e-09!241;UBERON:0001981!5.43e-09!60;UBERON:0007500!5.43e-09!60;UBERON:0004537!5.43e-09!60;UBERON:0006965!5.43e-09!60;UBERON:0001048!7.83e-08!168;UBERON:0004458!8.93e-08!49;UBERON:0002050!1.14e-07!605;UBERON:0005423!1.14e-07!605;UBERON:0000025!1.39e-07!194;UBERON:0002323!1.68e-07!46;UBERON:0000922!2.53e-07!612;UBERON:0000483!3.21e-07!309;UBERON:0000923!3.25e-07!604;UBERON:0005291!3.25e-07!604;UBERON:0006598!3.25e-07!604;UBERON:0002532!3.25e-07!604;UBERON:0004122!3.79e-07!15;UBERON:0000055!3.83e-07!69;UBERON:0000119!5.06e-07!312;UBERON:0002385!6.82e-07!63;UBERON:0001015!6.82e-07!63;UBERON:0000383!6.82e-07!63;UBERON:0000926!8.04e-07!448;UBERON:0004120!8.04e-07!448;UBERON:0006603!8.04e-07!448;UBERON:0003513!9.66e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;1.34e-39;5!UBERON:0000992;2.00e-38;13!UBERON:0000991;1.71e-29;21!UBERON:0003834;2.03e-25;5!UBERON:0001533;2.03e-25;5!UBERON:0003134;2.62e-24;33!UBERON:0002119;4.99e-19;4!UBERON:0003513;3.05e-18;7!UBERON:0000474;5.65e-18;37!UBERON:0002456;5.73e-17;2!UBERON:0003133;1.86e-16;44!UBERON:0003100;3.23e-15;41!UBERON:0005156;2.81e-09;59!UBERON:0000990;2.81e-09;59!UBERON:0001136;3.98e-09;1!UBERON:0000941;3.98e-09;1!UBERON:0001343;3.98e-09;1!UBERON:0001785;3.98e-09;1!UBERON:0002464;3.98e-09;1!UBERON:0004904;3.98e-09;1!UBERON:0001021;3.98e-09;1!UBERON:0004910;3.98e-09;1!UBERON:0004813;3.98e-09;1!UBERON:0004458;3.73e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,6.51e-40,5;UBERON:0000992,1.39e-38,13;UBERON:0000991,1.26e-29,21;UBERON:0009196,1.26e-29,21;UBERON:0009117,1.26e-29,21;UBERON:0005564,1.26e-29,21;UBERON:0004176,3.19e-28,22;UBERON:0003834,2.89e-25,5;UBERON:0001533,2.89e-25,5;UBERON:0003134,1.38e-24,37;UBERON:0000474,1.38e-24,37;UBERON:0003133,4.29e-22,48;UBERON:0003100,5.18e-22,41;UBERON:0002119,5.47e-19,4;UBERON:0003513,3.91e-18,7;UBERON:0005156,1.36e-17,59;UBERON:0000990,1.36e-17,59;UBERON:0002456,7.02e-17,2;UBERON:0002323,8.06e-13,46;UBERON:0004458,5.92e-12,49;UBERON:0003886,1.01e-10,54;UBERON:0002553,2.43e-09,61;UBERON:0001136,3.53e-09,1;UBERON:0001343,3.53e-09,1;UBERON:0004910,3.53e-09,1;UBERON:0005154,3.53e-09,1;UBERON:0005295,3.53e-09,1;UBERON:0004813,3.53e-09,1;UBERON:0005297,3.53e-09,1;UBERON:0005294,3.53e-09,1;UBERON:0010141,3.53e-09,1;UBERON:0005891,3.53e-09,1;UBERON:0000941,3.83e-09,1;UBERON:0001785,3.83e-09,1;UBERON:0002464,3.83e-09,1;UBERON:0004904,3.83e-09,1;UBERON:0001021,3.83e-09,1;UBERON:0003902,3.83e-09,1;UBERON:0005425,3.83e-09,1 | |||
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|short_description=p@chr9:6257179..6257191,+ | |short_description=p@chr9:6257179..6257191,+ | ||
}} | }} |
Latest revision as of 02:16, 1 August 2015
Short description: | p@chr9:6257179..6257191, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:6257179..6257191, + |
Coexpression cluster: | C1289_mesenchymal_Smooth_Cardiac_Mesothelial_Sertoli_leiomyoma_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 2.89e-25 | 5 |
smooth muscle cell of the internal thoracic artery | 7.02e-17 | 2 |
androgen binding protein secreting cell | 3.53e-09 | 1 |
seminiferous tubule epithelial cell | 3.53e-09 | 1 |
Sertoli cell | 3.53e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.53e-56 | 14 |
female reproductive organ cancer | 2.34e-28 | 27 |
reproductive organ cancer | 2.69e-26 | 29 |
cell type benign neoplasm | 3.57e-25 | 3 |
leiomyoma | 3.57e-25 | 3 |
benign neoplasm | 4.84e-19 | 4 |