FFCP PHASE1:Mm9::chr14:112073980..112074036,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=705 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:112073980..112074036,- | |||
|description=CAGE_peak_at_chr14:112073980..112074036,- | |description=CAGE_peak_at_chr14:112073980..112074036,- | ||
|id=chr14:112073980..112074036,- | |id=chr14:112073980..112074036,- | ||
|ontology_enrichment_celltype=CL:0000540!1.13e-14!33;CL:0000047!1.13e-14!33;CL:0000031!1.13e-14!33;CL:0000404!1.13e-14!33;CL:0000117!8.04e-13!23;CL:0000337!8.04e-13!23;CL:0000393!2.95e-10!39;CL:0000211!2.95e-10!39;CL:0000221!4.87e-09!44;CL:0000133!4.87e-09!44;CL:0002319!5.38e-09!43 | |ontology_enrichment_celltype=CL:0000540!1.13e-14!33;CL:0000047!1.13e-14!33;CL:0000031!1.13e-14!33;CL:0000404!1.13e-14!33;CL:0000117!8.04e-13!23;CL:0000337!8.04e-13!23;CL:0000393!2.95e-10!39;CL:0000211!2.95e-10!39;CL:0000221!4.87e-09!44;CL:0000133!4.87e-09!44;CL:0002319!5.38e-09!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.00e-16,23;CL:0000337,1.00e-16,23;CL:0000540,1.63e-16,33;CL:0000047,1.63e-16,33;CL:0000031,1.63e-16,33;CL:0000404,1.63e-16,33;CL:0000393,1.78e-12,39;CL:0000211,1.78e-12,39;CL:0002319,1.87e-10,43;CL:0000221,5.18e-10,44;CL:0000133,5.18e-10,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.26e-23!73;UBERON:0005743!6.26e-23!73;UBERON:0000073!9.74e-23!75;UBERON:0001016!9.74e-23!75;UBERON:0001049!4.53e-19!52;UBERON:0005068!4.53e-19!52;UBERON:0006241!4.53e-19!52;UBERON:0007135!4.53e-19!52;UBERON:0002020!1.85e-18!34;UBERON:0002346!1.61e-17!71;UBERON:0003075!1.61e-17!71;UBERON:0007284!1.61e-17!71;UBERON:0000955!3.86e-17!50;UBERON:0006238!3.86e-17!50;UBERON:0000033!8.30e-17!63;UBERON:0002616!2.27e-16!49;UBERON:0003056!2.30e-16!49;UBERON:0004121!5.73e-16!102;UBERON:0000924!5.73e-16!102;UBERON:0006601!5.73e-16!102;UBERON:0003080!7.09e-15!40;UBERON:0002791!1.85e-14!29;UBERON:0003528!1.85e-14!29;UBERON:0001893!1.85e-14!29;UBERON:0002780!3.20e-14!39;UBERON:0001890!3.20e-14!39;UBERON:0006240!3.20e-14!39;UBERON:0000956!4.44e-10!21;UBERON:0001869!4.44e-10!21;UBERON:0000203!4.44e-10!21;UBERON:0002619!7.09e-09!17;UBERON:0002021!1.42e-08!10;UBERON:0000411!1.42e-08!10;UBERON:0001950!1.42e-08!10;UBERON:0007811!1.66e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.73e-28,73;UBERON:0001016,3.35e-27,75;UBERON:0000073,2.69e-26,54;UBERON:0002020,5.46e-25,34;UBERON:0001049,9.76e-25,52;UBERON:0005068,9.76e-25,52;UBERON:0006241,9.76e-25,52;UBERON:0007135,9.76e-25,52;UBERON:0002346,1.66e-22,64;UBERON:0003075,1.66e-22,64;UBERON:0007284,1.66e-22,64;UBERON:0004121,3.74e-20,95;UBERON:0000924,3.74e-20,95;UBERON:0006601,3.74e-20,95;UBERON:0003080,3.82e-20,40;UBERON:0000955,8.56e-20,47;UBERON:0006238,8.56e-20,47;UBERON:0003528,1.48e-19,29;UBERON:0002791,1.48e-19,29;UBERON:0001893,1.48e-19,29;UBERON:0002780,2.97e-19,39;UBERON:0001890,2.97e-19,39;UBERON:0006240,2.97e-19,39;UBERON:0002616,8.60e-19,46;UBERON:0010371,1.07e-17,73;UBERON:0003056,1.93e-17,49;UBERON:0010314,1.05e-13,92;UBERON:0000956,1.28e-13,21;UBERON:0001869,1.28e-13,21;UBERON:0000203,1.28e-13,21;UBERON:0002619,5.10e-12,17;UBERON:0002021,5.22e-11,10;UBERON:0000411,5.22e-11,10;UBERON:0001950,5.22e-11,10;UBERON:0002240,1.12e-07,6;UBERON:0005174,1.12e-07,6;UBERON:0001137,1.12e-07,6;UBERON:0002420,3.73e-07,8;UBERON:0007245,3.73e-07,8;UBERON:0010009,3.73e-07,8;UBERON:0010011,3.73e-07,8;UBERON:0000454,3.73e-07,8;UBERON:0001948,7.93e-07,5;UBERON:0002315,7.93e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,1.03689612308478,1.08004750665353,1.26194976810829,9.71213346972932,10.1599528837742,1.95985278743926,1.53352753629178,3.67687514644008,5.50579404996943,2.29837208553338,4.91540906419979,1.45074916503213,1.9212405156506,4.16730696445408,3.90856198601933,6.75315132038016,5.19514042441154,12.374400589894,16.9422300150933,12.4887628702951,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,5.39246301857362,3.66000482254901,6.15706325353036,8.8650403298061,7.16003280524926,2.90903262383384,4.54275536589721,0,0,0,0.631325567659422,0.260240885925407,1.60931473103431,2.70093194708024,1.65775299619287,0.612328492361951,0.384341160854549,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0.411564272815887,0.398068533636986,0,0,0,3.52113813310353,1.64168241986767,0.900310307305074,1.89395788468168,0.787056926989615,1.07986979021165,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,11.9865270681553,5.55684906848136,0,0,1.2797295032114,1.62565670302307,0.77320476793256,1.00841762311671,1.11189021922435,1.14135375667535,0,0.658795818896044,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,3.85321415970701,4.80567915028033,0,0,1.26203287766503,0.780877488593277,2.15423397732799,0.955875191810208,1.78238939265915,0.566153061577665,3.64329631507405,3.50707029493574,3.16230222357219,12.8528526568723,0,0.178065603667255,0.488660878060728,0,0,4.12727081463468,0.604647113929502,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,1.77340233642274,1.78368817602071,1.64549020602121,1.522324745573,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,5.19190845629427,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,1.82987520414164,1.29606408986162,0.418176592028937,0.436725127492355,0.404593039154462,0.165306911450672,0,0,0,0,0,0,0.583353565032143,1.03327858782185,1.01373675294467,1.5256441023948,0.911430693907651,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,6.7770221114048,11.0478056761722,9.73922372846974,6.8741272937475,6.85082519770642,7.55393897389701,8.10027000278167,4.5032120322422,4.53142408984205,9.83744592328458,0.726511433089237,0.798049746802062,0.512200817262403,1.45864030240976,2.51535795153579,1.47074806760011,2.22246727801615,3.29656091582231,2.56735367673452,1.76888048234658,3.8021894983536,4.52703219326583,2.62196220915671,2.30490548657529,2.29741875822453,0.952587382566147,2.43357084484197,3.27945674788299,1.64834360321323,2.20798380201596,1.71434626192708,2.12970967391205,2.86123427936785,2.90692833264657,3.10560955370591,2.45382362885862,2.74391959309159,2.36762740294059,3.39510284614654,1.12228454331548,2.49133538060766,1.97008964751127,1.22769312950907,2.32405261778949,1.35034627686799,2.24829520144151,1.16965804222704,1.93383948643468,0.956441660344217,0.882365676478062,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,1.03689612308478,1.08004750665353,1.26194976810829,9.71213346972932,10.1599528837742,1.95985278743926,1.53352753629178,3.67687514644008,5.50579404996943,2.29837208553338,4.91540906419979,1.45074916503213,1.9212405156506,4.16730696445408,3.90856198601933,6.75315132038016,5.19514042441154,12.374400589894,16.9422300150933,12.4887628702951,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,5.39246301857362,3.66000482254901,6.15706325353036,8.8650403298061,7.16003280524926,2.90903262383384,4.54275536589721,0,0,0,0.631325567659422,0.260240885925407,1.60931473103431,2.70093194708024,1.65775299619287,0.612328492361951,0.384341160854549,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0.411564272815887,0.398068533636986,0,0,0,3.52113813310353,1.64168241986767,0.900310307305074,1.89395788468168,0.787056926989615,1.07986979021165,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,11.9865270681553,5.55684906848136,0,0,1.2797295032114,1.62565670302307,0.77320476793256,1.00841762311671,1.11189021922435,1.14135375667535,0,0.658795818896044,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,3.85321415970701,4.80567915028033,0,0,1.26203287766503,0.780877488593277,2.15423397732799,0.955875191810208,1.78238939265915,0.566153061577665,3.64329631507405,3.50707029493574,3.16230222357219,12.8528526568723,0,0.178065603667255,0.488660878060728,0,0,4.12727081463468,0.604647113929502,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,1.77340233642274,1.78368817602071,1.64549020602121,1.522324745573,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,5.19190845629427,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,1.82987520414164,1.29606408986162,0.418176592028937,0.436725127492355,0.404593039154462,0.165306911450672,0,0,0,0,0,0,0.583353565032143,1.03327858782185,1.01373675294467,1.5256441023948,0.911430693907651,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,6.7770221114048,11.0478056761722,9.73922372846974,6.8741272937475,6.85082519770642,7.55393897389701,8.10027000278167,4.5032120322422,4.53142408984205,9.83744592328458,0.726511433089237,0.798049746802062,0.512200817262403,1.45864030240976,2.51535795153579,1.47074806760011,2.22246727801615,3.29656091582231,2.56735367673452,1.76888048234658,3.8021894983536,4.52703219326583,2.62196220915671,2.30490548657529,2.29741875822453,0.952587382566147,2.43357084484197,3.27945674788299,1.64834360321323,2.20798380201596,1.71434626192708,2.12970967391205,2.86123427936785,2.90692833264657,3.10560955370591,2.45382362885862,2.74391959309159,2.36762740294059,3.39510284614654,1.12228454331548,2.49133538060766,1.97008964751127,1.22769312950907,2.32405261778949,1.35034627686799,2.24829520144151,1.16965804222704,1.93383948643468,0.956441660344217,0.882365676478062,0.695603506861264 | ||
|short_description=p@chr14:112073980..112074036,- | |short_description=p@chr14:112073980..112074036,- | ||
}} | }} |
Latest revision as of 23:05, 3 August 2015
Short description: | p@chr14:112073980..112074036, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:112073980..112074036, - |
Coexpression cluster: | MCL_coexpression_mm9:705 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.00e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.00e-16 | 23 |
neuron | 1.63e-16 | 33 |
neuronal stem cell | 1.63e-16 | 33 |
neuroblast | 1.63e-16 | 33 |
electrically signaling cell | 1.63e-16 | 33 |
electrically responsive cell | 1.78e-12 | 39 |
electrically active cell | 1.78e-12 | 39 |
neural cell | 1.87e-10 | 43 |
ectodermal cell | 5.18e-10 | 44 |
neurectodermal cell | 5.18e-10 | 44 |