FFCP PHASE1:Mm9::chr7:133967338..133967349,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr7:133967338..133967349,+ to FFCP PHASE1:Mm9::chr7:133967338..133967349,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:133967338..133967349,+ | |||
|description=CAGE_peak_at_chr7:133967338..133967349,+ | |||
|id=chr7:133967338..133967349,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.11e-35!23;CL:0000337!1.11e-35!23;CL:0000540!1.08e-28!33;CL:0000047!1.08e-28!33;CL:0000031!1.08e-28!33;CL:0000404!1.08e-28!33;CL:0000393!1.87e-23!39;CL:0000211!1.87e-23!39;CL:0002319!8.80e-23!43;CL:0000221!3.87e-22!44;CL:0000133!3.87e-22!44;CL:0000055!8.08e-19!50;CL:0002321!3.64e-13!70;CL:0000220!3.64e-13!70;CL:0002612!1.51e-08!3;CL:0000120!2.94e-08!3;CL:0002610!4.79e-08!3;CL:0000723!4.12e-07!91;CL:0000048!4.12e-07!91;CL:0002609!7.14e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.46e-45,23;CL:0000337,6.46e-45,23;CL:0000540,4.24e-31,33;CL:0000047,4.24e-31,33;CL:0000031,4.24e-31,33;CL:0000404,4.24e-31,33;CL:0000393,3.36e-26,39;CL:0000211,3.36e-26,39;CL:0002319,1.09e-23,43;CL:0000221,3.92e-23,44;CL:0000133,3.92e-23,44;CL:0002612,9.32e-23,3;CL:0002611,9.61e-16,2;CL:0002321,3.22e-14,70;CL:0000120,6.48e-11,3;CL:0000723,1.03e-10,91;CL:0000048,1.03e-10,91;CL:0002610,2.75e-10,3;CL:0000034,5.48e-10,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.90e-17!75;UBERON:0001016!1.90e-17!75;UBERON:0001017!1.12e-16!73;UBERON:0005743!1.12e-16!73;UBERON:0004121!9.77e-16!102;UBERON:0000924!9.77e-16!102;UBERON:0006601!9.77e-16!102;UBERON:0002020!5.19e-15!34;UBERON:0001948!3.67e-13!5;UBERON:0002315!3.67e-13!5;UBERON:0002346!4.29e-11!71;UBERON:0003075!4.29e-11!71;UBERON:0007284!4.29e-11!71;UBERON:0001049!5.35e-11!52;UBERON:0005068!5.35e-11!52;UBERON:0006241!5.35e-11!52;UBERON:0007135!5.35e-11!52;UBERON:0002240!6.91e-11!6;UBERON:0005174!6.91e-11!6;UBERON:0001137!6.91e-11!6;UBERON:0000033!3.71e-10!63;UBERON:0003076!2.68e-09!12;UBERON:0003057!2.68e-09!12;UBERON:0002616!8.26e-09!49;UBERON:0000955!1.47e-08!50;UBERON:0006238!1.47e-08!50;UBERON:0002257!1.51e-08!3;UBERON:0004684!4.79e-08!3;UBERON:0002275!4.79e-08!3;UBERON:0002791!8.09e-08!29;UBERON:0003528!8.09e-08!29;UBERON:0001893!8.09e-08!29;UBERON:0003056!2.47e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,7.88e-37,5;UBERON:0002315,7.88e-37,5;UBERON:0002240,9.89e-31,6;UBERON:0005174,9.89e-31,6;UBERON:0001137,9.89e-31,6;UBERON:0002257,9.32e-23,3;UBERON:0002256,9.61e-16,2;UBERON:0003076,1.95e-15,12;UBERON:0003057,1.95e-15,12;UBERON:0001017,1.35e-13,73;UBERON:0002020,2.22e-13,34;UBERON:0001016,3.30e-13,75;UBERON:0000073,9.43e-13,54;UBERON:0004684,2.75e-10,3;UBERON:0002275,2.75e-10,3;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0000489,7.91e-09,21;UBERON:0001049,1.58e-08,52;UBERON:0005068,1.58e-08,52;UBERON:0006241,1.58e-08,52;UBERON:0007135,1.58e-08,52;UBERON:0002346,8.54e-07,64;UBERON:0003075,8.54e-07,64;UBERON:0007284,8.54e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,4.23192783417626,1.26766280701236,0,0,0,0,0,0,0,0.933206510776299,2.02508907497536,0,1.71390590642282,1.54607978666129,0.61245399607477,1.15014565221884,0,1.10115880999389,1.0214987046815,0.768032666281217,0.659431438650969,2.56165402086747,0,0.837548997004143,0,0.30559649555362,1.76777151284201,1.56608848879013,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,4.23192783417626,1.26766280701236,0,0,0,0,0,0,0,0.933206510776299,2.02508907497536,0,1.71390590642282,1.54607978666129,0.61245399607477,1.15014565221884,0,1.10115880999389,1.0214987046815,0.768032666281217,0.659431438650969,2.56165402086747,0,0.837548997004143,0,0.30559649555362,1.76777151284201,1.56608848879013,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:133967338..133967349,+ | |||
}} | }} |
Latest revision as of 06:01, 4 August 2015
Short description: | p@chr7:133967338..133967349, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:133967338..133967349, + |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.46e-45 | 23 |
neuroblast (sensu Vertebrata) | 6.46e-45 | 23 |
neuron | 4.24e-31 | 33 |
neuronal stem cell | 4.24e-31 | 33 |
neuroblast | 4.24e-31 | 33 |
electrically signaling cell | 4.24e-31 | 33 |
electrically responsive cell | 3.36e-26 | 39 |
electrically active cell | 3.36e-26 | 39 |
neural cell | 1.09e-23 | 43 |
ectodermal cell | 3.92e-23 | 44 |
neurectodermal cell | 3.92e-23 | 44 |
neuron of the ventral spinal cord | 9.32e-23 | 3 |
neuron of the dorsal spinal cord | 9.61e-16 | 2 |
embryonic cell | 3.22e-14 | 70 |
granule cell | 6.48e-11 | 3 |
somatic stem cell | 1.03e-10 | 91 |
multi fate stem cell | 1.03e-10 | 91 |
raphe nuclei neuron | 2.75e-10 | 3 |
stem cell | 5.48e-10 | 97 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 7.88e-37 | 5 |
gray matter of spinal cord | 7.88e-37 | 5 |
spinal cord | 9.89e-31 | 6 |
dorsal region element | 9.89e-31 | 6 |
dorsum | 9.89e-31 | 6 |
ventral horn of spinal cord | 9.32e-23 | 3 |
dorsal horn of spinal cord | 9.61e-16 | 2 |
posterior neural tube | 1.95e-15 | 12 |
chordal neural plate | 1.95e-15 | 12 |
central nervous system | 1.35e-13 | 73 |
gray matter | 2.22e-13 | 34 |
nervous system | 3.30e-13 | 75 |
regional part of nervous system | 9.43e-13 | 54 |
raphe nuclei | 2.75e-10 | 3 |
reticular formation | 2.75e-10 | 3 |
ectoderm-derived structure | 3.22e-10 | 95 |
ectoderm | 3.22e-10 | 95 |
presumptive ectoderm | 3.22e-10 | 95 |
cavitated compound organ | 7.91e-09 | 21 |
neural tube | 1.58e-08 | 52 |
neural rod | 1.58e-08 | 52 |
future spinal cord | 1.58e-08 | 52 |
neural keel | 1.58e-08 | 52 |
neurectoderm | 8.54e-07 | 64 |
neural plate | 8.54e-07 | 64 |
presumptive neural plate | 8.54e-07 | 64 |