FFCP PHASE1:Mm9::chr5:31117095..31117149,+: Difference between revisions
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{{FFCP|EntrezGene=100732|HGNC=|MCL_coexpression_id=1|UniProt=D3Z6G3,Q2UZW7,Q6PER3|association_with_transcript=0bp_to_ENSMUST00000114724,ENSMUST00000123334,ENSMUST00000146459,NM_133350,uc008wvz.1,uc012due.1_5end|description=CAGE_peak_1_at_Mapre3_5end|id=chr5:31117095..31117149,+|ontology_enrichment_celltype=CL:0000117!4.53e-12!23;CL:0000337!4.53e-12!23;CL:0000055!1.23e-10!50;CL:0002319!4.94e-10!43;CL:0000221!6.45e-10!44;CL:0000133!6.45e-10!44;CL:0000393!1.29e-08!39;CL:0000211!1.29e-08!39;CL:0000540!2.36e-08!33;CL:0000047!2.36e-08!33;CL:0000031!2.36e-08!33;CL:0000404!2.36e-08!33;CL:0002321!2.96e-07!70;CL:0000220!2.96e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,4.52e-12,23;CL:0000337,4.52e-12,23;CL:0002319,4.93e-10,43;CL:0000221,6.43e-10,44;CL:0000133,6.43e-10,44;CL:0000393,1.29e-08,39;CL:0000211,1.29e-08,39;CL:0000540,2.36e-08,33;CL:0000047,2.36e-08,33;CL:0000031,2.36e-08,33;CL:0000404,2.36e-08,33;CL:0002321,3.24e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.99e-27!73;UBERON:0005743!5.99e-27!73;UBERON:0000073!1.85e-26!75;UBERON:0001016!1.85e-26!75;UBERON:0001049!8.87e-26!52;UBERON:0005068!8.87e-26!52;UBERON:0006241!8.87e-26!52;UBERON:0007135!8.87e-26!52;UBERON:0000955!5.30e-25!50;UBERON:0006238!5.30e-25!50;UBERON:0002616!2.89e-24!49;UBERON:0000033!1.22e-23!63;UBERON:0004121!1.71e-23!102;UBERON:0000924!1.71e-23!102;UBERON:0006601!1.71e-23!102;UBERON:0002346!1.39e-21!71;UBERON:0003075!1.39e-21!71;UBERON:0007284!1.39e-21!71;UBERON:0003080!3.56e-19!40;UBERON:0002020!1.24e-18!34;UBERON:0002780!1.87e-18!39;UBERON:0001890!1.87e-18!39;UBERON:0006240!1.87e-18!39;UBERON:0003056!6.21e-18!49;UBERON:0004111!2.74e-16!122;UBERON:0002791!5.00e-16!29;UBERON:0003528!5.00e-16!29;UBERON:0001893!5.00e-16!29;UBERON:0000025!2.10e-15!114;UBERON:0000956!8.40e-12!21;UBERON:0001869!8.40e-12!21;UBERON:0000203!8.40e-12!21;UBERON:0002619!3.04e-10!17;UBERON:0002021!1.17e-07!10;UBERON:0000411!1.17e-07!10;UBERON:0001950!1.17e-07!10;UBERON:0007811!1.20e-07!86;UBERON:0007023!2.99e-07!51;UBERON:0003076!3.84e-07!12;UBERON:0003057!3.84e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.90e-27,54;UBERON:0001017,5.93e-27,73;UBERON:0001016,1.84e-26,75;UBERON:0001049,8.80e-26,52;UBERON:0005068,8.80e-26,52;UBERON:0006241,8.80e-26,52;UBERON:0007135,8.80e-26,52;UBERON:0004121,1.84e-24,95;UBERON:0000924,1.84e-24,95;UBERON:0006601,1.84e-24,95;UBERON:0002346,3.48e-23,64;UBERON:0003075,3.48e-23,64;UBERON:0007284,3.48e-23,64;UBERON:0000955,6.46e-23,47;UBERON:0006238,6.46e-23,47;UBERON:0002616,3.41e-22,46;UBERON:0010371,4.24e-20,73;UBERON:0003080,3.54e-19,40;UBERON:0002020,1.23e-18,34;UBERON:0002780,1.86e-18,39;UBERON:0001890,1.86e-18,39;UBERON:0006240,1.86e-18,39;UBERON:0010314,2.80e-18,92;UBERON:0003056,6.18e-18,49;UBERON:0004111,2.72e-16,122;UBERON:0003528,4.98e-16,29;UBERON:0002791,4.98e-16,29;UBERON:0001893,4.98e-16,29;UBERON:0000025,2.09e-15,114;UBERON:0000956,8.37e-12,21;UBERON:0001869,8.37e-12,21;UBERON:0000203,8.37e-12,21;UBERON:0002619,3.03e-10,17;UBERON:0002021,1.17e-07,10;UBERON:0000411,1.17e-07,10;UBERON:0001950,1.17e-07,10;UBERON:0007023,2.98e-07,51;UBERON:0003076,3.83e-07,12;UBERON:0003057,3.83e-07,12|phase1_expression=21.2997966649376,80.264343757053,83.7198600476746,56.5608075143772,56.6012174839372,10.4085148585372,11.6806320297763,9.55512593467664,0.703943610758334,1.63845168425395,0,0.159544317990673,5.47842335779858,9.26656265641372,0,1.41732687172878,2.09868563438444,3.47008381894061,2.33094537129756,2.97072756258621,77.5594806177756,0,0.261199789138935,34.5583633233758,33.4937550358068,60.2943562320771,31.0148637234534,35.7682246258576,42.3752225387714,14.3657173963161,21.5078595335646,1.27006134691926,0.61506478758457,0,0.866554859253824,0.997407872150954,1.02084678131185,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0,34.6216249432838,37.0025798951228,18.7217687204915,43.8139152834902,50.5818362802636,62.6105620793245,57.1623903278393,24.4976237844384,48.8758718840903,1.51004345451963,5.07753499407941,9.41062637598899,23.1533492432352,39.2550812716097,47.9575045818021,85.5798629436099,98.9213131238701,89.3702278943713,28.124096161738,26.6788438833342,30.5965903875676,29.6659908770092,31.9716051725745,47.9360176829448,78.3805342855971,50.3931515819201,60.212648495934,54.8948149127107,119.973413449598,101.378660296791,55.3658412451592,58.2740463790877,70.7798465689716,203.714379848869,209.279547121623,218.889309890147,90.2102208074526,88.5600390071325,84.3879660301951,220.554569211091,140.127889897888,187.483450022146,104.887776428626,86.2772385642564,91.8949267918732,14.6151553133045,33.3270580070924,28.6965843814661,47.3233132339763,31.9586526842643,41.0174425644741,43.5350199689938,59.1395490968483,45.9253253830829,18.2360445158522,10.3914401841148,14.4869225549239,26.3377194982393,23.0987659345772,7.64415719119937,0,13.4224445426953,11.6545538118545,13.1436355703844,34.5977155548752,9.32176381129818,52.2516329508183,12.1439728736295,23.74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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100732 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z6G3,uniprot:Q2UZW7,uniprot:Q6PER3 | |||
|association_with_transcript=0bp_to_ENSMUST00000114724,ENSMUST00000123334,ENSMUST00000146459,NM_133350,uc008wvz.1,uc012due.1_5end | |||
|cluster_id=chr5:31117095..31117149,+ | |||
|description=CAGE_peak_1_at_Mapre3_5end | |||
|id=chr5:31117095..31117149,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.53e-12!23;CL:0000337!4.53e-12!23;CL:0000055!1.23e-10!50;CL:0002319!4.94e-10!43;CL:0000221!6.45e-10!44;CL:0000133!6.45e-10!44;CL:0000393!1.29e-08!39;CL:0000211!1.29e-08!39;CL:0000540!2.36e-08!33;CL:0000047!2.36e-08!33;CL:0000031!2.36e-08!33;CL:0000404!2.36e-08!33;CL:0002321!2.96e-07!70;CL:0000220!2.96e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.52e-12,23;CL:0000337,4.52e-12,23;CL:0002319,4.93e-10,43;CL:0000221,6.43e-10,44;CL:0000133,6.43e-10,44;CL:0000393,1.29e-08,39;CL:0000211,1.29e-08,39;CL:0000540,2.36e-08,33;CL:0000047,2.36e-08,33;CL:0000031,2.36e-08,33;CL:0000404,2.36e-08,33;CL:0002321,3.24e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.99e-27!73;UBERON:0005743!5.99e-27!73;UBERON:0000073!1.85e-26!75;UBERON:0001016!1.85e-26!75;UBERON:0001049!8.87e-26!52;UBERON:0005068!8.87e-26!52;UBERON:0006241!8.87e-26!52;UBERON:0007135!8.87e-26!52;UBERON:0000955!5.30e-25!50;UBERON:0006238!5.30e-25!50;UBERON:0002616!2.89e-24!49;UBERON:0000033!1.22e-23!63;UBERON:0004121!1.71e-23!102;UBERON:0000924!1.71e-23!102;UBERON:0006601!1.71e-23!102;UBERON:0002346!1.39e-21!71;UBERON:0003075!1.39e-21!71;UBERON:0007284!1.39e-21!71;UBERON:0003080!3.56e-19!40;UBERON:0002020!1.24e-18!34;UBERON:0002780!1.87e-18!39;UBERON:0001890!1.87e-18!39;UBERON:0006240!1.87e-18!39;UBERON:0003056!6.21e-18!49;UBERON:0004111!2.74e-16!122;UBERON:0002791!5.00e-16!29;UBERON:0003528!5.00e-16!29;UBERON:0001893!5.00e-16!29;UBERON:0000025!2.10e-15!114;UBERON:0000956!8.40e-12!21;UBERON:0001869!8.40e-12!21;UBERON:0000203!8.40e-12!21;UBERON:0002619!3.04e-10!17;UBERON:0002021!1.17e-07!10;UBERON:0000411!1.17e-07!10;UBERON:0001950!1.17e-07!10;UBERON:0007811!1.20e-07!86;UBERON:0007023!2.99e-07!51;UBERON:0003076!3.84e-07!12;UBERON:0003057!3.84e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.90e-27,54;UBERON:0001017,5.93e-27,73;UBERON:0001016,1.84e-26,75;UBERON:0001049,8.80e-26,52;UBERON:0005068,8.80e-26,52;UBERON:0006241,8.80e-26,52;UBERON:0007135,8.80e-26,52;UBERON:0004121,1.84e-24,95;UBERON:0000924,1.84e-24,95;UBERON:0006601,1.84e-24,95;UBERON:0002346,3.48e-23,64;UBERON:0003075,3.48e-23,64;UBERON:0007284,3.48e-23,64;UBERON:0000955,6.46e-23,47;UBERON:0006238,6.46e-23,47;UBERON:0002616,3.41e-22,46;UBERON:0010371,4.24e-20,73;UBERON:0003080,3.54e-19,40;UBERON:0002020,1.23e-18,34;UBERON:0002780,1.86e-18,39;UBERON:0001890,1.86e-18,39;UBERON:0006240,1.86e-18,39;UBERON:0010314,2.80e-18,92;UBERON:0003056,6.18e-18,49;UBERON:0004111,2.72e-16,122;UBERON:0003528,4.98e-16,29;UBERON:0002791,4.98e-16,29;UBERON:0001893,4.98e-16,29;UBERON:0000025,2.09e-15,114;UBERON:0000956,8.37e-12,21;UBERON:0001869,8.37e-12,21;UBERON:0000203,8.37e-12,21;UBERON:0002619,3.03e-10,17;UBERON:0002021,1.17e-07,10;UBERON:0000411,1.17e-07,10;UBERON:0001950,1.17e-07,10;UBERON:0007023,2.98e-07,51;UBERON:0003076,3.83e-07,12;UBERON:0003057,3.83e-07,12 | |||
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| |||
|short_description=p1@Mapre3 | |||
}} |
Revision as of 06:39, 4 August 2015
Short description: | p1@Mapre3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mapre3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000114724, ENSMUST00000123334, ENSMUST00000146459, NM_133350, uc008wvz.1, uc012due.1_5end |
EntrezGene: | 100732 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.52e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.52e-12 | 23 |
neural cell | 4.93e-10 | 43 |
ectodermal cell | 6.43e-10 | 44 |
neurectodermal cell | 6.43e-10 | 44 |
electrically responsive cell | 1.29e-08 | 39 |
electrically active cell | 1.29e-08 | 39 |
neuron | 2.36e-08 | 33 |
neuronal stem cell | 2.36e-08 | 33 |
neuroblast | 2.36e-08 | 33 |
electrically signaling cell | 2.36e-08 | 33 |
embryonic cell | 3.24e-07 | 70 |