FFCP PHASE1:Mm9::chr4:129488887..129488928,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2312 | |MCL_coexpression_id=2312 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:129488887..129488928,+ | |||
|description=CAGE_peak_at_chr4:129488887..129488928,+ | |description=CAGE_peak_at_chr4:129488887..129488928,+ | ||
|id=chr4:129488887..129488928,+ | |id=chr4:129488887..129488928,+ | ||
|ontology_enrichment_celltype=CL:0000988!9.41e-12!32;CL:0002032!9.41e-12!32;CL:0000037!9.41e-12!32;CL:0000566!9.41e-12!32;CL:0000837!9.41e-12!32;CL:0000838!2.13e-09!12;CL:0002031!8.25e-09!25;CL:0000084!1.50e-08!11;CL:0000827!1.50e-08!11;CL:0000542!2.79e-08!13;CL:0000051!2.79e-08!13;CL:0000791!3.88e-08!9;CL:0000789!3.88e-08!9;CL:0002420!3.88e-08!9;CL:0002419!3.88e-08!9;CL:0000790!3.88e-08!9;CL:0000063!1.95e-07!66;CL:0000624!2.71e-07!8 | |ontology_enrichment_celltype=CL:0000988!9.41e-12!32;CL:0002032!9.41e-12!32;CL:0000037!9.41e-12!32;CL:0000566!9.41e-12!32;CL:0000837!9.41e-12!32;CL:0000838!2.13e-09!12;CL:0002031!8.25e-09!25;CL:0000084!1.50e-08!11;CL:0000827!1.50e-08!11;CL:0000542!2.79e-08!13;CL:0000051!2.79e-08!13;CL:0000791!3.88e-08!9;CL:0000789!3.88e-08!9;CL:0002420!3.88e-08!9;CL:0002419!3.88e-08!9;CL:0000790!3.88e-08!9;CL:0000063!1.95e-07!66;CL:0000624!2.71e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.74e-19,32;CL:0002032,7.74e-19,32;CL:0000037,7.74e-19,32;CL:0000837,7.74e-19,32;CL:0000791,2.01e-13,9;CL:0000789,2.01e-13,9;CL:0002420,2.01e-13,9;CL:0002419,2.01e-13,9;CL:0000790,2.01e-13,9;CL:0002031,3.39e-13,25;CL:0002320,2.57e-12,46;CL:0000134,2.57e-12,46;CL:0000838,5.14e-12,12;CL:0000624,6.60e-12,8;CL:0000542,6.92e-11,13;CL:0000051,6.92e-11,13;CL:0000084,1.44e-10,11;CL:0000827,1.44e-10,11;CL:0000553,7.65e-10,6;CL:0000556,7.65e-10,6;CL:0000219,1.62e-09,54;CL:0000049,2.50e-09,19;CL:0000893,2.99e-09,6;CL:0002489,2.99e-09,6;CL:0000898,2.99e-09,6;CL:0000809,2.99e-09,6;CL:0000810,2.99e-09,6;CL:0000895,2.99e-09,6;CL:0000808,2.99e-09,6;CL:0000894,2.99e-09,6;CL:0000806,2.99e-09,6;CL:0000807,2.99e-09,6;CL:0000805,2.99e-09,6;CL:0002425,2.99e-09,6;CL:0002436,2.99e-09,6;CL:0002427,2.99e-09,6;CL:0002428,2.99e-09,6;CL:0002429,2.99e-09,6;CL:0002433,2.99e-09,6;CL:0002431,2.99e-09,6;CL:0002432,2.99e-09,6;CL:0000034,4.83e-08,97;CL:0000738,1.01e-07,17;CL:0002087,1.01e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.24e-14!48;UBERON:0002390!1.11e-12!45;UBERON:0003061!1.11e-12!45;UBERON:0002405!4.43e-12!70;UBERON:0004177!2.38e-10!29;UBERON:0001004!1.43e-08!42;UBERON:0000072!2.59e-08!27;UBERON:0000065!4.01e-08!41;UBERON:0003408!5.29e-08!24;UBERON:0005057!7.24e-08!51;UBERON:0005911!1.49e-07!69;UBERON:0002370!1.64e-07!23;UBERON:0000974!1.64e-07!23;UBERON:0004807!1.64e-07!23;UBERON:0005058!1.64e-07!23;UBERON:0003351!1.64e-07!23;UBERON:0009113!1.64e-07!23;UBERON:0003295!1.64e-07!23;UBERON:0009722!1.64e-07!23;UBERON:0005562!1.64e-07!23;UBERON:0007690!1.64e-07!23;UBERON:0003929!5.87e-07!55;UBERON:0006562!6.40e-07!24;UBERON:0001557!6.40e-07!24;UBERON:0001042!6.40e-07!24;UBERON:0008814!6.40e-07!24;UBERON:0009145!6.40e-07!24 | |ontology_enrichment_uberon=UBERON:0002193!2.24e-14!48;UBERON:0002390!1.11e-12!45;UBERON:0003061!1.11e-12!45;UBERON:0002405!4.43e-12!70;UBERON:0004177!2.38e-10!29;UBERON:0001004!1.43e-08!42;UBERON:0000072!2.59e-08!27;UBERON:0000065!4.01e-08!41;UBERON:0003408!5.29e-08!24;UBERON:0005057!7.24e-08!51;UBERON:0005911!1.49e-07!69;UBERON:0002370!1.64e-07!23;UBERON:0000974!1.64e-07!23;UBERON:0004807!1.64e-07!23;UBERON:0005058!1.64e-07!23;UBERON:0003351!1.64e-07!23;UBERON:0009113!1.64e-07!23;UBERON:0003295!1.64e-07!23;UBERON:0009722!1.64e-07!23;UBERON:0005562!1.64e-07!23;UBERON:0007690!1.64e-07!23;UBERON:0003929!5.87e-07!55;UBERON:0006562!6.40e-07!24;UBERON:0001557!6.40e-07!24;UBERON:0001042!6.40e-07!24;UBERON:0008814!6.40e-07!24;UBERON:0009145!6.40e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.58e-18,48;UBERON:0002405,1.58e-18,48;UBERON:0002390,9.09e-16,45;UBERON:0003061,9.09e-16,45;UBERON:0002384,2.57e-12,46;UBERON:0004177,2.55e-10,29;UBERON:0005057,2.55e-10,29;UBERON:0000077,6.21e-09,35;UBERON:0003408,2.43e-08,24;UBERON:0000072,2.76e-08,27;UBERON:0001004,3.75e-08,42;UBERON:0002370,1.38e-07,23;UBERON:0000974,1.38e-07,23;UBERON:0004807,1.38e-07,23;UBERON:0005058,1.38e-07,23;UBERON:0003351,1.38e-07,23;UBERON:0009113,1.38e-07,23;UBERON:0003295,1.38e-07,23;UBERON:0009722,1.38e-07,23;UBERON:0005562,1.38e-07,23;UBERON:0007690,1.38e-07,23;UBERON:0000065,1.62e-07,41;UBERON:0003081,2.85e-07,87;UBERON:0006562,3.85e-07,24;UBERON:0001557,3.85e-07,24;UBERON:0001042,3.85e-07,24;UBERON:0008814,3.85e-07,24;UBERON:0009145,3.85e-07,24 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0.500895729946347,0.671517087647559,0.233612640595526,7.36002943616985,23.9340827657833,13.5757425266756,2.56826952338257,2.39316476986009,18.1472773727078,16.9595580692855,5.3297561890506,10.3262386368811,4.89693314689703,40.3791571658544,42.7797032849905,20.7950929381035,0.255129870453209,0.695036658406197,0.522399578277871,1.11994695955385,1.37645568640302,0,1.29228598847722,0.430942465371778,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0.577703239502549,1.16364251750945,2.24586291888606,11.3003540298965,8.5946887897618,9.42342739152837,27.6468799374577,16.3930916390027,5.82612423637384,0,0,0,0,0,0,0,0,0,26.5096517571223,13.7818806982155,25.8792225339697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,3.18850937571846,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,2.16491041011214,0.760079596425296,3.53867111510348,0.91347103775248,51.7875767294343,0.593768556259299,0,0,0,0,0.23517741427141,0.125666591329675,0,0.433798070759735,2.65383165584962,0,1.10420759230197,0.969750506270444,0,0.292780797011547,0.209446706813455,1.27728527604296,6.82946209683746,5.99902730993408,6.4805815807263,0,0,0,0,0,0,0,0,1.49288364732112,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0,1.03481348295606,0,0,0,0,0,0,0,0,2.80885274925294,2.57347907114715,3.40996199274711,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0.939444931322602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,1.39398891278057,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0.246794327843601,0,0,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0,0.287696137450811,0.810676133875177,0,1.43768206527355,2.23284568601102,0.624075346229121,0.252578877947112,0,0,1.84753190166605,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0.8858587585951,0.637819074629948,2.78567635016755,1.72684981865896,2.74833211304872,0,0.54390568381871,0,0.827810238914197,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0.32977250588296,0.161464426695906,0,0,0,0.582961673259701,0,6.83483523191411,0.206386867963223,0.555583582109135,2.82552685507037,7.79157098009843,7.32090154260872,16.3179292794101,17.4939315404573,16.5839968565309,0,0,0,0,0,0,0,0.41326727862668,0,1.03691978633434,1.86401793926078,0.56369293868419,0,0,0,0,0,0.117357238645754,0,0,0,0,3.47612232690996,0,0.205421914329655,0.51968329191118,0.537080087002444,0.198681354781265,0.961563596159751,1.32920574457119,1.51449674922221,0.990688486514998,1.71404514732629,2.63136277997332,1.92423683280659,3.74006086981021,0,0.665957860122194,1.43542170575161,0.839423081820392,0.19318959403219,0.93841237725591,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0,0,0.238436189947321,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0.57386499620653,0,0.463735671240843 | |phase1_expression=0,0.348975407639361,0,0.30246421130683,0.500895729946347,0.671517087647559,0.233612640595526,7.36002943616985,23.9340827657833,13.5757425266756,2.56826952338257,2.39316476986009,18.1472773727078,16.9595580692855,5.3297561890506,10.3262386368811,4.89693314689703,40.3791571658544,42.7797032849905,20.7950929381035,0.255129870453209,0.695036658406197,0.522399578277871,1.11994695955385,1.37645568640302,0,1.29228598847722,0.430942465371778,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0.577703239502549,1.16364251750945,2.24586291888606,11.3003540298965,8.5946887897618,9.42342739152837,27.6468799374577,16.3930916390027,5.82612423637384,0,0,0,0,0,0,0,0,0,26.5096517571223,13.7818806982155,25.8792225339697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,3.18850937571846,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,2.16491041011214,0.760079596425296,3.53867111510348,0.91347103775248,51.7875767294343,0.593768556259299,0,0,0,0,0.23517741427141,0.125666591329675,0,0.433798070759735,2.65383165584962,0,1.10420759230197,0.969750506270444,0,0.292780797011547,0.209446706813455,1.27728527604296,6.82946209683746,5.99902730993408,6.4805815807263,0,0,0,0,0,0,0,0,1.49288364732112,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0,1.03481348295606,0,0,0,0,0,0,0,0,2.80885274925294,2.57347907114715,3.40996199274711,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0.939444931322602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,1.39398891278057,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0.246794327843601,0,0,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0,0.287696137450811,0.810676133875177,0,1.43768206527355,2.23284568601102,0.624075346229121,0.252578877947112,0,0,1.84753190166605,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0.8858587585951,0.637819074629948,2.78567635016755,1.72684981865896,2.74833211304872,0,0.54390568381871,0,0.827810238914197,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0.32977250588296,0.161464426695906,0,0,0,0.582961673259701,0,6.83483523191411,0.206386867963223,0.555583582109135,2.82552685507037,7.79157098009843,7.32090154260872,16.3179292794101,17.4939315404573,16.5839968565309,0,0,0,0,0,0,0,0.41326727862668,0,1.03691978633434,1.86401793926078,0.56369293868419,0,0,0,0,0,0.117357238645754,0,0,0,0,3.47612232690996,0,0.205421914329655,0.51968329191118,0.537080087002444,0.198681354781265,0.961563596159751,1.32920574457119,1.51449674922221,0.990688486514998,1.71404514732629,2.63136277997332,1.92423683280659,3.74006086981021,0,0.665957860122194,1.43542170575161,0.839423081820392,0.19318959403219,0.93841237725591,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0,0,0.238436189947321,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0.57386499620653,0,0.463735671240843 | ||
|short_description=p@chr4:129488887..129488928,+ | |short_description=p@chr4:129488887..129488928,+ | ||
}} | }} |
Latest revision as of 19:48, 4 August 2015
Short description: | p@chr4:129488887..129488928, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:129488887..129488928, + |
Coexpression cluster: | MCL_coexpression_mm9:2312 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.58e-18 | 48 |
immune system | 1.58e-18 | 48 |
hematopoietic system | 9.09e-16 | 45 |
blood island | 9.09e-16 | 45 |
connective tissue | 2.57e-12 | 46 |
hemopoietic organ | 2.55e-10 | 29 |
immune organ | 2.55e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 6.21e-09 | 35 |
gland of gut | 2.43e-08 | 24 |
segment of respiratory tract | 2.76e-08 | 27 |
respiratory system | 3.75e-08 | 42 |
thymus | 1.38e-07 | 23 |
neck | 1.38e-07 | 23 |
respiratory system epithelium | 1.38e-07 | 23 |
hemolymphoid system gland | 1.38e-07 | 23 |
pharyngeal epithelium | 1.38e-07 | 23 |
thymic region | 1.38e-07 | 23 |
pharyngeal gland | 1.38e-07 | 23 |
entire pharyngeal arch endoderm | 1.38e-07 | 23 |
thymus primordium | 1.38e-07 | 23 |
early pharyngeal endoderm | 1.38e-07 | 23 |
respiratory tract | 1.62e-07 | 41 |
lateral plate mesoderm | 2.85e-07 | 87 |
pharynx | 3.85e-07 | 24 |
upper respiratory tract | 3.85e-07 | 24 |
chordate pharynx | 3.85e-07 | 24 |
pharyngeal arch system | 3.85e-07 | 24 |
pharyngeal region of foregut | 3.85e-07 | 24 |