FFCP PHASE1:Mm9::chr4:130488076..130488092,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=521|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:130488076..130488092,+|id=chr4:130488076..130488092,+|ontology_enrichment_celltype=CL:0000988!1.31e-11!32;CL:0002032!1.31e-11!32;CL:0000037!1.31e-11!32;CL:0000566!1.31e-11!32;CL:0000837!1.31e-11!32;CL:0002031!1.01e-08!25;CL:0000838!1.47e-08!12;CL:0000738!1.63e-08!17;CL:0002087!1.63e-08!17;CL:0000542!2.95e-08!13;CL:0000051!2.95e-08!13;CL:0000084!8.46e-08!11;CL:0000827!8.46e-08!11|ontology_enrichment_celltype_v019_2=CL:0000988,1.37e-19,32;CL:0002032,1.37e-19,32;CL:0000037,1.37e-19,32;CL:0000837,1.37e-19,32;CL:0002031,5.36e-15,25;CL:0000838,2.82e-14,12;CL:0000738,5.58e-13,17;CL:0002087,5.58e-13,17;CL:0000542,6.70e-13,13;CL:0000051,6.70e-13,13;CL:0000084,6.74e-13,11;CL:0000827,6.74e-13,11;CL:0002320,3.05e-11,46;CL:0000134,3.05e-11,46;CL:0000791,6.39e-11,9;CL:0000789,6.39e-11,9;CL:0002420,6.39e-11,9;CL:0002419,6.39e-11,9;CL:0000790,6.39e-11,9;CL:0000624,1.03e-09,8;CL:0000049,1.58e-08,19;CL:0000219,1.67e-08,54;CL:0000893,2.63e-07,6;CL:0002489,2.63e-07,6;CL:0000898,2.63e-07,6;CL:0000809,2.63e-07,6;CL:0000810,2.63e-07,6;CL:0000895,2.63e-07,6;CL:0000808,2.63e-07,6;CL:0000894,2.63e-07,6;CL:0000806,2.63e-07,6;CL:0000807,2.63e-07,6;CL:0000805,2.63e-07,6;CL:0002425,2.63e-07,6;CL:0002436,2.63e-07,6;CL:0002427,2.63e-07,6;CL:0002428,2.63e-07,6;CL:0002429,2.63e-07,6;CL:0002433,2.63e-07,6;CL:0002431,2.63e-07,6;CL:0002432,2.63e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.87e-16!48;UBERON:0002405!3.10e-16!70;UBERON:0002390!7.77e-15!45;UBERON:0003061!7.77e-15!45;UBERON:0004177!2.02e-11!29;UBERON:0005057!7.67e-11!51;UBERON:0001004!3.53e-09!42;UBERON:0000065!7.36e-09!41;UBERON:0003408!7.86e-09!24;UBERON:0002370!1.65e-08!23;UBERON:0000974!1.65e-08!23;UBERON:0004807!1.65e-08!23;UBERON:0005058!1.65e-08!23;UBERON:0003351!1.65e-08!23;UBERON:0009113!1.65e-08!23;UBERON:0003295!1.65e-08!23;UBERON:0009722!1.65e-08!23;UBERON:0005562!1.65e-08!23;UBERON:0007690!1.65e-08!23;UBERON:0006562!2.03e-08!24;UBERON:0001557!2.03e-08!24;UBERON:0001042!2.03e-08!24;UBERON:0008814!2.03e-08!24;UBERON:0009145!2.03e-08!24;UBERON:0001041!2.12e-08!92;UBERON:0003081!2.36e-08!88;UBERON:0000077!4.28e-08!97;UBERON:0000072!8.90e-08!27;UBERON:0000926!1.37e-07!193;UBERON:0004120!1.37e-07!193;UBERON:0006603!1.37e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.88e-28,48;UBERON:0002405,1.88e-28,48;UBERON:0002390,1.67e-25,45;UBERON:0003061,1.67e-25,45;UBERON:0004177,1.28e-20,29;UBERON:0005057,1.28e-20,29;UBERON:0003408,2.70e-17,24;UBERON:0002370,1.04e-16,23;UBERON:0000974,1.04e-16,23;UBERON:0004807,1.04e-16,23;UBERON:0005058,1.04e-16,23;UBERON:0003351,1.04e-16,23;UBERON:0009113,1.04e-16,23;UBERON:0003295,1.04e-16,23;UBERON:0009722,1.04e-16,23;UBERON:0005562,1.04e-16,23;UBERON:0007690,1.04e-16,23;UBERON:0006562,9.35e-16,24;UBERON:0001557,9.35e-16,24;UBERON:0001042,9.35e-16,24;UBERON:0008814,9.35e-16,24;UBERON:0009145,9.35e-16,24;UBERON:0000077,9.56e-16,35;UBERON:0001004,2.66e-14,42;UBERON:0000065,9.83e-14,41;UBERON:0000072,2.47e-13,27;UBERON:0001041,1.28e-11,80;UBERON:0003081,2.99e-11,87;UBERON:0002384,3.05e-11,46;UBERON:0007811,1.75e-09,36;UBERON:0005911,1.57e-08,69;UBERON:0001007,1.45e-07,116;UBERON:0001555,1.45e-07,116;UBERON:0007026,1.45e-07,116;UBERON:0004119,2.96e-07,118;UBERON:0000925,2.96e-07,118;UBERON:0006595,2.96e-07,118;UBERON:0002530,3.11e-07,65;UBERON:0000153,4.97e-07,43;UBERON:0003929,5.87e-07,55;UBERON:0000926,6.31e-07,120;UBERON:0004120,6.31e-07,120;UBERON:0006603,6.31e-07,120;UBERON:0004921,9.39e-07,114|phase1_expression=0,0,0,0,0,0,0,16.140415430197,5.77233760821834,3.27690336850791,3.5955773327356,1.59544317990673,13.6960583944965,14.9488888136486,0.333109761815663,1.61980213911861,4.89693314689703,9.14840279538889,6.44437837946972,8.91218268775863,0.340173160604279,5.95745707205312,4.70159620450084,2.55987876469451,2.06468352960453,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,0,5.23523743973798,2.94115744015507,4.09827290975067,1.94204141212461,0,0,0,0,0,0,0,0,0,29.8653038782771,8.70434570413613,11.4271891708438,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.151452386666368,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,25.8937883647172,1.1875371125186,0,0,0,0,0.352766121407114,0.125666591329675,0.247194967734374,0.433798070759735,1.76922110389975,0.647067399789637,3.5334642953663,2.90925151881133,5.59175283654366,0,0,1.02182822083437,7.42853771936706,2.39961092397363,5.08280908292259,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0.324482526135515,0.101839363850316,3.73220911830279,0,0,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0.378212160335639,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,2.80885274925294,3.3455227924913,5.96743348730745,0.207125772535502,0,0,0,0,0.308534225774757,0,0,0.233530684734339,0.329119699826961,0.164167464079095,0.324275238183423,0.146199987425332,0.658650345873152,0.671032093801859,0.210289948564127,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,1.25667604400135,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0,0.140271639780637,0.189709611372772,0.147610147979602,0.627994911365499,0.123397163921801,0.296452627087149,0.333690211432188,0.982794975566015,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0.287696137450811,2.43202840162553,0.549122826376163,8.62609239164127,2.23284568601102,1.24815069245824,1.01031551178845,0.538192240565737,0,2.03228509183265,0,0,0,0.704070744865506,0.167506257441816,0.238043640886014,0.585400943573396,1.26108115284953,1.32878813789265,1.75400245523236,2.29408640602033,3.10832967358612,2.16973587872267,6.03165135757089,19.5806046174735,1.47529281905711,1.65562047782839,0.160550589987792,0.234423373184406,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0,0.377210159511796,0,0.307435147943927,0,1.09060118843252,0,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0.16488625294148,0.484393280087717,0.180938774784468,0,0.164140899745061,0.582961673259701,0.556275906031529,3.58828849675491,0.82554747185289,3.88908507476395,3.95573759709851,10.935538217682,4.57556346413045,15.8079939894285,9.37674730568509,9.95039811391851,2.86401185404534,0,0,0.108005340821801,0,0,0.134864346384821,0.826534557253359,0,0.777689839750757,1.24267862617385,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0,0.724752362478018,0.576060012515731,12.324433704499,0,1.1298205288131,2.98817892848929,2.50637373934474,5.56307793387542,7.21172697119813,9.7475087935221,11.3082423941925,14.707913684415,19.0561489908629,13.2542717806063,15.9711657122947,16.4796432076012,0.226730383615211,0.665957860122194,0,0.167884616364078,0.772758376128762,0.563047426353546,0.73260649706906,0.214368379079066,0,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0.755393897389701,0,0,0,0.51776031175182,0,0.399024873401031,0,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0.382576664137687,0,0.463735671240843|short_description=p@chr4:130488076..130488092,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=521 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:130488076..130488092,+ | |||
|description=CAGE_peak_at_chr4:130488076..130488092,+ | |||
|id=chr4:130488076..130488092,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.31e-11!32;CL:0002032!1.31e-11!32;CL:0000037!1.31e-11!32;CL:0000566!1.31e-11!32;CL:0000837!1.31e-11!32;CL:0002031!1.01e-08!25;CL:0000838!1.47e-08!12;CL:0000738!1.63e-08!17;CL:0002087!1.63e-08!17;CL:0000542!2.95e-08!13;CL:0000051!2.95e-08!13;CL:0000084!8.46e-08!11;CL:0000827!8.46e-08!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.37e-19,32;CL:0002032,1.37e-19,32;CL:0000037,1.37e-19,32;CL:0000837,1.37e-19,32;CL:0002031,5.36e-15,25;CL:0000838,2.82e-14,12;CL:0000738,5.58e-13,17;CL:0002087,5.58e-13,17;CL:0000542,6.70e-13,13;CL:0000051,6.70e-13,13;CL:0000084,6.74e-13,11;CL:0000827,6.74e-13,11;CL:0002320,3.05e-11,46;CL:0000134,3.05e-11,46;CL:0000791,6.39e-11,9;CL:0000789,6.39e-11,9;CL:0002420,6.39e-11,9;CL:0002419,6.39e-11,9;CL:0000790,6.39e-11,9;CL:0000624,1.03e-09,8;CL:0000049,1.58e-08,19;CL:0000219,1.67e-08,54;CL:0000893,2.63e-07,6;CL:0002489,2.63e-07,6;CL:0000898,2.63e-07,6;CL:0000809,2.63e-07,6;CL:0000810,2.63e-07,6;CL:0000895,2.63e-07,6;CL:0000808,2.63e-07,6;CL:0000894,2.63e-07,6;CL:0000806,2.63e-07,6;CL:0000807,2.63e-07,6;CL:0000805,2.63e-07,6;CL:0002425,2.63e-07,6;CL:0002436,2.63e-07,6;CL:0002427,2.63e-07,6;CL:0002428,2.63e-07,6;CL:0002429,2.63e-07,6;CL:0002433,2.63e-07,6;CL:0002431,2.63e-07,6;CL:0002432,2.63e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.87e-16!48;UBERON:0002405!3.10e-16!70;UBERON:0002390!7.77e-15!45;UBERON:0003061!7.77e-15!45;UBERON:0004177!2.02e-11!29;UBERON:0005057!7.67e-11!51;UBERON:0001004!3.53e-09!42;UBERON:0000065!7.36e-09!41;UBERON:0003408!7.86e-09!24;UBERON:0002370!1.65e-08!23;UBERON:0000974!1.65e-08!23;UBERON:0004807!1.65e-08!23;UBERON:0005058!1.65e-08!23;UBERON:0003351!1.65e-08!23;UBERON:0009113!1.65e-08!23;UBERON:0003295!1.65e-08!23;UBERON:0009722!1.65e-08!23;UBERON:0005562!1.65e-08!23;UBERON:0007690!1.65e-08!23;UBERON:0006562!2.03e-08!24;UBERON:0001557!2.03e-08!24;UBERON:0001042!2.03e-08!24;UBERON:0008814!2.03e-08!24;UBERON:0009145!2.03e-08!24;UBERON:0001041!2.12e-08!92;UBERON:0003081!2.36e-08!88;UBERON:0000077!4.28e-08!97;UBERON:0000072!8.90e-08!27;UBERON:0000926!1.37e-07!193;UBERON:0004120!1.37e-07!193;UBERON:0006603!1.37e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.88e-28,48;UBERON:0002405,1.88e-28,48;UBERON:0002390,1.67e-25,45;UBERON:0003061,1.67e-25,45;UBERON:0004177,1.28e-20,29;UBERON:0005057,1.28e-20,29;UBERON:0003408,2.70e-17,24;UBERON:0002370,1.04e-16,23;UBERON:0000974,1.04e-16,23;UBERON:0004807,1.04e-16,23;UBERON:0005058,1.04e-16,23;UBERON:0003351,1.04e-16,23;UBERON:0009113,1.04e-16,23;UBERON:0003295,1.04e-16,23;UBERON:0009722,1.04e-16,23;UBERON:0005562,1.04e-16,23;UBERON:0007690,1.04e-16,23;UBERON:0006562,9.35e-16,24;UBERON:0001557,9.35e-16,24;UBERON:0001042,9.35e-16,24;UBERON:0008814,9.35e-16,24;UBERON:0009145,9.35e-16,24;UBERON:0000077,9.56e-16,35;UBERON:0001004,2.66e-14,42;UBERON:0000065,9.83e-14,41;UBERON:0000072,2.47e-13,27;UBERON:0001041,1.28e-11,80;UBERON:0003081,2.99e-11,87;UBERON:0002384,3.05e-11,46;UBERON:0007811,1.75e-09,36;UBERON:0005911,1.57e-08,69;UBERON:0001007,1.45e-07,116;UBERON:0001555,1.45e-07,116;UBERON:0007026,1.45e-07,116;UBERON:0004119,2.96e-07,118;UBERON:0000925,2.96e-07,118;UBERON:0006595,2.96e-07,118;UBERON:0002530,3.11e-07,65;UBERON:0000153,4.97e-07,43;UBERON:0003929,5.87e-07,55;UBERON:0000926,6.31e-07,120;UBERON:0004120,6.31e-07,120;UBERON:0006603,6.31e-07,120;UBERON:0004921,9.39e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,16.140415430197,5.77233760821834,3.27690336850791,3.5955773327356,1.59544317990673,13.6960583944965,14.9488888136486,0.333109761815663,1.61980213911861,4.89693314689703,9.14840279538889,6.44437837946972,8.91218268775863,0.340173160604279,5.95745707205312,4.70159620450084,2.55987876469451,2.06468352960453,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,0,5.23523743973798,2.94115744015507,4.09827290975067,1.94204141212461,0,0,0,0,0,0,0,0,0,29.8653038782771,8.70434570413613,11.4271891708438,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.151452386666368,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,25.8937883647172,1.1875371125186,0,0,0,0,0.352766121407114,0.125666591329675,0.247194967734374,0.433798070759735,1.76922110389975,0.647067399789637,3.5334642953663,2.90925151881133,5.59175283654366,0,0,1.02182822083437,7.42853771936706,2.39961092397363,5.08280908292259,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0.324482526135515,0.101839363850316,3.73220911830279,0,0,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0.378212160335639,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,2.80885274925294,3.3455227924913,5.96743348730745,0.207125772535502,0,0,0,0,0.308534225774757,0,0,0.233530684734339,0.329119699826961,0.164167464079095,0.324275238183423,0.146199987425332,0.658650345873152,0.671032093801859,0.210289948564127,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,1.25667604400135,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0,0.140271639780637,0.189709611372772,0.147610147979602,0.627994911365499,0.123397163921801,0.296452627087149,0.333690211432188,0.982794975566015,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0.287696137450811,2.43202840162553,0.549122826376163,8.62609239164127,2.23284568601102,1.24815069245824,1.01031551178845,0.538192240565737,0,2.03228509183265,0,0,0,0.704070744865506,0.167506257441816,0.238043640886014,0.585400943573396,1.26108115284953,1.32878813789265,1.75400245523236,2.29408640602033,3.10832967358612,2.16973587872267,6.03165135757089,19.5806046174735,1.47529281905711,1.65562047782839,0.160550589987792,0.234423373184406,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0,0.377210159511796,0,0.307435147943927,0,1.09060118843252,0,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0.16488625294148,0.484393280087717,0.180938774784468,0,0.164140899745061,0.582961673259701,0.556275906031529,3.58828849675491,0.82554747185289,3.88908507476395,3.95573759709851,10.935538217682,4.57556346413045,15.8079939894285,9.37674730568509,9.95039811391851,2.86401185404534,0,0,0.108005340821801,0,0,0.134864346384821,0.826534557253359,0,0.777689839750757,1.24267862617385,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0,0.724752362478018,0.576060012515731,12.324433704499,0,1.1298205288131,2.98817892848929,2.50637373934474,5.56307793387542,7.21172697119813,9.7475087935221,11.3082423941925,14.707913684415,19.0561489908629,13.2542717806063,15.9711657122947,16.4796432076012,0.226730383615211,0.665957860122194,0,0.167884616364078,0.772758376128762,0.563047426353546,0.73260649706906,0.214368379079066,0,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0.755393897389701,0,0,0,0.51776031175182,0,0.399024873401031,0,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0.382576664137687,0,0.463735671240843 | |||
|short_description=p@chr4:130488076..130488092,+ | |||
}} |
Latest revision as of 20:28, 4 August 2015
Short description: | p@chr4:130488076..130488092, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:130488076..130488092, + |
Coexpression cluster: | MCL_coexpression_mm9:521 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data