FFCP PHASE1:Mm9::chr4:130490809..130490822,+: Difference between revisions
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{{FFCP|EntrezGene=16792|HGNC=|MCL_coexpression_id=38|UniProt=|association_with_transcript=-323bp_to_uc008uzw.1_5end|description=CAGE_peak_8_at_Laptm5_5end|id=chr4:130490809..130490822,+|ontology_enrichment_celltype=CL:0000738!2.67e-13!17;CL:0002087!2.67e-13!17;CL:0000988!4.10e-13!32;CL:0002032!4.10e-13!32;CL:0000037!4.10e-13!32;CL:0000566!4.10e-13!32;CL:0000837!4.10e-13!32;CL:0002031!1.68e-12!25;CL:0000838!2.11e-10!12;CL:0002320!8.02e-10!46;CL:0000134!8.02e-10!46;CL:0000084!1.38e-09!11;CL:0000827!1.38e-09!11;CL:0000542!2.70e-09!13;CL:0000051!2.70e-09!13;CL:0000791!8.64e-08!9;CL:0000789!8.64e-08!9;CL:0002420!8.64e-08!9;CL:0002419!8.64e-08!9;CL:0000790!8.64e-08!9;CL:0000219!1.36e-07!54;CL:0000034!4.09e-07!97;CL:0000624!8.15e-07!8|ontology_enrichment_celltype_v019_2=CL:0000738,8.71e-28,17;CL:0002087,8.71e-28,17;CL:0002194,1.09e-20,4;CL:0000766,1.09e-20,4;CL:0000234,1.09e-20,4;CL:0000576,1.09e-20,4;CL:0000235,1.09e-20,4;CL:0000864,1.09e-20,4;CL:0002009,1.09e-20,4;CL:0000040,1.09e-20,4;CL:0000559,1.09e-20,4;CL:0002320,2.38e-19,46;CL:0000134,2.38e-19,46;CL:0002031,1.79e-18,25;CL:0000557,7.81e-18,7;CL:0000988,4.37e-17,32;CL:0002032,4.37e-17,32;CL:0000037,4.37e-17,32;CL:0000837,4.37e-17,32;CL:0002092,1.44e-16,3;CL:0002540,1.44e-16,3;CL:0000219,3.50e-16,54;CL:0000084,1.44e-15,11;CL:0000827,1.44e-15,11;CL:0000838,3.07e-14,12;CL:0000791,1.23e-13,9;CL:0000789,1.23e-13,9;CL:0002420,1.23e-13,9;CL:0002419,1.23e-13,9;CL:0000790,1.23e-13,9;CL:0000542,4.09e-13,13;CL:0000051,4.09e-13,13;CL:0000473,6.42e-12,7;CL:0000723,9.06e-12,91;CL:0000048,9.06e-12,91;CL:0000878,3.48e-11,2;CL:0000129,3.48e-11,2;CL:0002476,3.48e-11,2;CL:0000034,6.76e-11,97;CL:0000624,4.34e-10,8;CL:0000763,1.00e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.72e-07,3;DOID:4045,3.72e-07,3|ontology_enrichment_uberon=UBERON:0002193!5.39e-21!48;UBERON:0002390!1.76e-20!45;UBERON:0003061!1.76e-20!45;UBERON:0002405!5.67e-16!70;UBERON:0004177!1.25e-11!29;UBERON:0001474!1.52e-11!22;UBERON:0004765!1.52e-11!22;UBERON:0001434!1.52e-11!22;UBERON:0002204!2.78e-10!32;UBERON:0002384!8.02e-10!46;UBERON:0003081!9.72e-10!88;UBERON:0002371!1.03e-09!16;UBERON:0006562!7.78e-08!24;UBERON:0001557!7.78e-08!24;UBERON:0001042!7.78e-08!24;UBERON:0008814!7.78e-08!24;UBERON:0009145!7.78e-08!24;UBERON:0005057!8.86e-08!51;UBERON:0002370!1.98e-07!23;UBERON:0000974!1.98e-07!23;UBERON:0004807!1.98e-07!23;UBERON:0005058!1.98e-07!23;UBERON:0003351!1.98e-07!23;UBERON:0009113!1.98e-07!23;UBERON:0003295!1.98e-07!23;UBERON:0009722!1.98e-07!23;UBERON:0005562!1.98e-07!23;UBERON:0007690!1.98e-07!23;UBERON:0003408!6.49e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.44e-19,16;UBERON:0002384,2.38e-19,46;UBERON:0002204,2.42e-14,32;UBERON:0001474,5.63e-14,22;UBERON:0004765,5.63e-14,22;UBERON:0001434,5.63e-14,22;UBERON:0002390,5.84e-12,45;UBERON:0003061,5.84e-12,45;UBERON:0002193,4.13e-11,48;UBERON:0002405,4.13e-11,48|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.67860320474049,0.422366166455,0.234064526321993,0.171217968225505,0.159544317990673,2.05440875917447,2.18551006047494,0,0.404950534779652,0.699561878128147,0.788655413395594,0.822686601634433,0,0.0850432901510698,0.992909512008853,1.04479915655574,0.639969691173627,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,1.0470474879476,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.838913030288682,5.07753499407941,3.36093799142464,0,0,0.515672092277442,0,0,0,0,0,11.6986963246582,43.5101199529469,17.0515227587064,4.49400165777607,4.61061966385865,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0.589257170947335,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0.718890747035522,0,0.635351135365324,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0.575392274901621,0.648540907100142,0,4.31304619582064,0.744281895337007,0,0,0.358794827043824,0,0,0,0,0,0,0,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0,0.163863314715738,0,0,16.5870412333199,3.26343410291226,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,1.19609616558497,0.619160603889667,0.370389054739423,0.753473828018764,0.956859594047176,0.915112692826091,0.509935289981566,0.839708713941948,0.552799895217695,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,0,0,0,0.179026695667481,0.596044064343795,0.841368146639782,0.443068581523732,0.605798699688886,0.15241361331,0.302478555410522,0.974578807397524,0.865906574762965,0.701261413089414,0.226730383615211,0.221985953374065,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.191288332068843,0,0|short_description=p8@Laptm5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16792 | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-323bp_to_uc008uzw.1_5end | |||
|cluster_id=chr4:130490809..130490822,+ | |||
|description=CAGE_peak_8_at_Laptm5_5end | |||
|id=chr4:130490809..130490822,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.67e-13!17;CL:0002087!2.67e-13!17;CL:0000988!4.10e-13!32;CL:0002032!4.10e-13!32;CL:0000037!4.10e-13!32;CL:0000566!4.10e-13!32;CL:0000837!4.10e-13!32;CL:0002031!1.68e-12!25;CL:0000838!2.11e-10!12;CL:0002320!8.02e-10!46;CL:0000134!8.02e-10!46;CL:0000084!1.38e-09!11;CL:0000827!1.38e-09!11;CL:0000542!2.70e-09!13;CL:0000051!2.70e-09!13;CL:0000791!8.64e-08!9;CL:0000789!8.64e-08!9;CL:0002420!8.64e-08!9;CL:0002419!8.64e-08!9;CL:0000790!8.64e-08!9;CL:0000219!1.36e-07!54;CL:0000034!4.09e-07!97;CL:0000624!8.15e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.71e-28,17;CL:0002087,8.71e-28,17;CL:0002194,1.09e-20,4;CL:0000766,1.09e-20,4;CL:0000234,1.09e-20,4;CL:0000576,1.09e-20,4;CL:0000235,1.09e-20,4;CL:0000864,1.09e-20,4;CL:0002009,1.09e-20,4;CL:0000040,1.09e-20,4;CL:0000559,1.09e-20,4;CL:0002320,2.38e-19,46;CL:0000134,2.38e-19,46;CL:0002031,1.79e-18,25;CL:0000557,7.81e-18,7;CL:0000988,4.37e-17,32;CL:0002032,4.37e-17,32;CL:0000037,4.37e-17,32;CL:0000837,4.37e-17,32;CL:0002092,1.44e-16,3;CL:0002540,1.44e-16,3;CL:0000219,3.50e-16,54;CL:0000084,1.44e-15,11;CL:0000827,1.44e-15,11;CL:0000838,3.07e-14,12;CL:0000791,1.23e-13,9;CL:0000789,1.23e-13,9;CL:0002420,1.23e-13,9;CL:0002419,1.23e-13,9;CL:0000790,1.23e-13,9;CL:0000542,4.09e-13,13;CL:0000051,4.09e-13,13;CL:0000473,6.42e-12,7;CL:0000723,9.06e-12,91;CL:0000048,9.06e-12,91;CL:0000878,3.48e-11,2;CL:0000129,3.48e-11,2;CL:0002476,3.48e-11,2;CL:0000034,6.76e-11,97;CL:0000624,4.34e-10,8;CL:0000763,1.00e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.72e-07,3;DOID:4045,3.72e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.39e-21!48;UBERON:0002390!1.76e-20!45;UBERON:0003061!1.76e-20!45;UBERON:0002405!5.67e-16!70;UBERON:0004177!1.25e-11!29;UBERON:0001474!1.52e-11!22;UBERON:0004765!1.52e-11!22;UBERON:0001434!1.52e-11!22;UBERON:0002204!2.78e-10!32;UBERON:0002384!8.02e-10!46;UBERON:0003081!9.72e-10!88;UBERON:0002371!1.03e-09!16;UBERON:0006562!7.78e-08!24;UBERON:0001557!7.78e-08!24;UBERON:0001042!7.78e-08!24;UBERON:0008814!7.78e-08!24;UBERON:0009145!7.78e-08!24;UBERON:0005057!8.86e-08!51;UBERON:0002370!1.98e-07!23;UBERON:0000974!1.98e-07!23;UBERON:0004807!1.98e-07!23;UBERON:0005058!1.98e-07!23;UBERON:0003351!1.98e-07!23;UBERON:0009113!1.98e-07!23;UBERON:0003295!1.98e-07!23;UBERON:0009722!1.98e-07!23;UBERON:0005562!1.98e-07!23;UBERON:0007690!1.98e-07!23;UBERON:0003408!6.49e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.44e-19,16;UBERON:0002384,2.38e-19,46;UBERON:0002204,2.42e-14,32;UBERON:0001474,5.63e-14,22;UBERON:0004765,5.63e-14,22;UBERON:0001434,5.63e-14,22;UBERON:0002390,5.84e-12,45;UBERON:0003061,5.84e-12,45;UBERON:0002193,4.13e-11,48;UBERON:0002405,4.13e-11,48 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.67860320474049,0.422366166455,0.234064526321993,0.171217968225505,0.159544317990673,2.05440875917447,2.18551006047494,0,0.404950534779652,0.699561878128147,0.788655413395594,0.822686601634433,0,0.0850432901510698,0.992909512008853,1.04479915655574,0.639969691173627,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,1.0470474879476,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.838913030288682,5.07753499407941,3.36093799142464,0,0,0.515672092277442,0,0,0,0,0,11.6986963246582,43.5101199529469,17.0515227587064,4.49400165777607,4.61061966385865,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0.589257170947335,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0.718890747035522,0,0.635351135365324,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0.575392274901621,0.648540907100142,0,4.31304619582064,0.744281895337007,0,0,0.358794827043824,0,0,0,0,0,0,0,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0,0.163863314715738,0,0,16.5870412333199,3.26343410291226,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,1.19609616558497,0.619160603889667,0.370389054739423,0.753473828018764,0.956859594047176,0.915112692826091,0.509935289981566,0.839708713941948,0.552799895217695,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,0,0,0,0.179026695667481,0.596044064343795,0.841368146639782,0.443068581523732,0.605798699688886,0.15241361331,0.302478555410522,0.974578807397524,0.865906574762965,0.701261413089414,0.226730383615211,0.221985953374065,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.191288332068843,0,0 | |||
|short_description=p8@Laptm5 | |||
}} |
Revision as of 20:33, 4 August 2015
Short description: | p8@Laptm5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Laptm5_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | -323bp_to_uc008uzw.1_5end |
EntrezGene: | 16792 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.44e-19 | 16 |
connective tissue | 2.38e-19 | 46 |
musculoskeletal system | 2.42e-14 | 32 |
bone element | 5.63e-14 | 22 |
skeletal element | 5.63e-14 | 22 |
skeletal system | 5.63e-14 | 22 |
hematopoietic system | 5.84e-12 | 45 |
blood island | 5.84e-12 | 45 |
hemolymphoid system | 4.13e-11 | 48 |
immune system | 4.13e-11 | 48 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.72e-07 | 3 |
muscle cancer | 3.72e-07 | 3 |