FFCP PHASE1:Mm9::chr4:133054429..133054446,-: Difference between revisions
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{{FFCP|EntrezGene=69539|HGNC=|MCL_coexpression_id=1|UniProt=Q80ZI1|association_with_transcript=18bp_to_ENSMUST00000125541,NM_001081156,uc008vcu.1_5end|description=CAGE_peak_1_at_Trnp1_5end|id=chr4:133054429..133054446,-|ontology_enrichment_celltype=CL:0000055!3.39e-12!50;CL:0000393!4.20e-11!39;CL:0000211!4.20e-11!39;CL:0000221!5.08e-11!44;CL:0000133!5.08e-11!44;CL:0002319!1.54e-10!43;CL:0000540!1.18e-08!33;CL:0000047!1.18e-08!33;CL:0000031!1.18e-08!33;CL:0000404!1.18e-08!33;CL:0000117!3.33e-07!23;CL:0000337!3.33e-07!23|ontology_enrichment_celltype_v019_2=CL:0000393,1.47e-11,39;CL:0000211,1.47e-11,39;CL:0000221,1.79e-11,44;CL:0000133,1.79e-11,44;CL:0002319,5.73e-11,43;CL:0000540,5.39e-09,33;CL:0000047,5.39e-09,33;CL:0000031,5.39e-09,33;CL:0000404,5.39e-09,33;CL:0000117,1.78e-07,23;CL:0000337,1.78e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.96e-29!102;UBERON:0000924!5.96e-29!102;UBERON:0006601!5.96e-29!102;UBERON:0000073!9.15e-27!75;UBERON:0001016!9.15e-27!75;UBERON:0001017!9.10e-26!73;UBERON:0005743!9.10e-26!73;UBERON:0000033!7.05e-22!63;UBERON:0001049!1.63e-20!52;UBERON:0005068!1.63e-20!52;UBERON:0006241!1.63e-20!52;UBERON:0007135!1.63e-20!52;UBERON:0000955!3.24e-20!50;UBERON:0006238!3.24e-20!50;UBERON:0002346!5.84e-20!71;UBERON:0003075!5.84e-20!71;UBERON:0007284!5.84e-20!71;UBERON:0002616!1.31e-19!49;UBERON:0003080!1.03e-14!40;UBERON:0003056!1.58e-14!49;UBERON:0002780!4.22e-14!39;UBERON:0001890!4.22e-14!39;UBERON:0006240!4.22e-14!39;UBERON:0002020!1.45e-13!34;UBERON:0002791!2.01e-11!29;UBERON:0003528!2.01e-11!29;UBERON:0001893!2.01e-11!29;UBERON:0007811!1.97e-10!86;UBERON:0000153!2.91e-09!94;UBERON:0000956!3.72e-09!21;UBERON:0001869!3.72e-09!21;UBERON:0000203!3.72e-09!21;UBERON:0000468!1.17e-07!333;UBERON:0002619!1.64e-07!17;UBERON:0002021!4.17e-07!10;UBERON:0000411!4.17e-07!10;UBERON:0001950!4.17e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.62e-30,95;UBERON:0000924,2.62e-30,95;UBERON:0006601,2.62e-30,95;UBERON:0001016,5.61e-28,75;UBERON:0001017,6.24e-27,73;UBERON:0010371,5.50e-23,73;UBERON:0000073,5.74e-23,54;UBERON:0001049,2.01e-21,52;UBERON:0005068,2.01e-21,52;UBERON:0006241,2.01e-21,52;UBERON:0007135,2.01e-21,52;UBERON:0002346,3.44e-21,64;UBERON:0003075,3.44e-21,64;UBERON:0007284,3.44e-21,64;UBERON:0000955,6.97e-19,47;UBERON:0006238,6.97e-19,47;UBERON:0010314,1.91e-18,92;UBERON:0002616,2.91e-18,46;UBERON:0003080,2.42e-15,40;UBERON:0003056,7.04e-15,49;UBERON:0002780,1.06e-14,39;UBERON:0001890,1.06e-14,39;UBERON:0006240,1.06e-14,39;UBERON:0002020,3.85e-14,34;UBERON:0003528,6.79e-12,29;UBERON:0002791,6.79e-12,29;UBERON:0001893,6.79e-12,29;UBERON:0000956,1.61e-09,21;UBERON:0001869,1.61e-09,21;UBERON:0000203,1.61e-09,21;UBERON:0002619,8.48e-08,17;UBERON:0002021,2.26e-07,10;UBERON:0000411,2.26e-07,10;UBERON:0001950,2.26e-07,10;UBERON:0004111,3.81e-07,122;UBERON:0003076,7.70e-07,12;UBERON:0003057,7.70e-07,12|phase1_expression=59.5753711229834,0,0,0,0,0.839396359559449,0.233612640595526,0,0.281577444303333,0,0.171217968225505,0,5.47842335779858,0.174840804837995,0,0.202475267389826,4.89693314689703,0.157731082679119,0.137114433605739,0,14.4573593256819,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,11.330713617802,13.990016508293,4.22157529971868,85.2806565339363,1.52617609466313,3.95435128922049,4.86074747685709,13.5786828976602,2.87505128729943,0,0,1.00828139742739,16.7218633423366,36.6762803121609,31.455997628924,4.24864567805155,3.1739458756322,3.1691570175309,16.9422266034566,20.4537803105562,3.1496490104849,1.97773272513395,2.8419204597844,3.89480143673926,1.15265491596466,7.36196247390191,5.8052553482627,7.57169860864975,32.2785612376298,24.5164080456291,2.20483438586917,1.53352753629178,2.75765635983006,92.4973400394865,98.8299996779353,87.4021174228025,3.03338461779446,3.11057988248193,1.56274011167028,91.572023672453,39.9561453122493,52.4097989874459,14.142172102736,15.3761415263031,4.10078780815661,8.85996461998253,10.6555899750568,0,0,0,0,0,0,7.02222100658759,0,0,0,37.1826628210436,0,2.54805239706646,0,0.649473123033642,0.760079596425296,0.505524445014783,2.96878087269556,0,4.00793775475027,0.173485326766136,3.65358573974569,2.30615497256059,2.56228488939458,3.99801604261396,1.13099932196708,3.46072954828123,3.18118585223806,0.884610551949874,1.61766849947409,0.441683036920787,0.969750506270444,3.72783522436244,42.1604347696628,42.9365748967583,2.04365644166873,0,0,0,60.9647902377628,103.852636839828,5.78010019719176,66.2270659932573,66.2303034485556,105.556326636257,81.6073553230821,2.34230536855727,1.24406970610093,2.27450482590307,15.1518136238261,0.780722657776222,1.37941262660084,1.62055916824814,2.26057226753573,2.78949646520444,3.45907044769094,3.84177070694888,32.0792179716379,0.646703978798527,1.32374256117473,1.75951124163949,3.06874025398605,1.39023624612799,1.0447564995665,2.88094990971121,0.59710280045548,0,0,0,0.207125772535502,1.1726302999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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69539 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80ZI1 | |||
|association_with_transcript=18bp_to_ENSMUST00000125541,NM_001081156,uc008vcu.1_5end | |||
|cluster_id=chr4:133054429..133054446,- | |||
|description=CAGE_peak_1_at_Trnp1_5end | |||
|id=chr4:133054429..133054446,- | |||
|ontology_enrichment_celltype=CL:0000055!3.39e-12!50;CL:0000393!4.20e-11!39;CL:0000211!4.20e-11!39;CL:0000221!5.08e-11!44;CL:0000133!5.08e-11!44;CL:0002319!1.54e-10!43;CL:0000540!1.18e-08!33;CL:0000047!1.18e-08!33;CL:0000031!1.18e-08!33;CL:0000404!1.18e-08!33;CL:0000117!3.33e-07!23;CL:0000337!3.33e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.47e-11,39;CL:0000211,1.47e-11,39;CL:0000221,1.79e-11,44;CL:0000133,1.79e-11,44;CL:0002319,5.73e-11,43;CL:0000540,5.39e-09,33;CL:0000047,5.39e-09,33;CL:0000031,5.39e-09,33;CL:0000404,5.39e-09,33;CL:0000117,1.78e-07,23;CL:0000337,1.78e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.96e-29!102;UBERON:0000924!5.96e-29!102;UBERON:0006601!5.96e-29!102;UBERON:0000073!9.15e-27!75;UBERON:0001016!9.15e-27!75;UBERON:0001017!9.10e-26!73;UBERON:0005743!9.10e-26!73;UBERON:0000033!7.05e-22!63;UBERON:0001049!1.63e-20!52;UBERON:0005068!1.63e-20!52;UBERON:0006241!1.63e-20!52;UBERON:0007135!1.63e-20!52;UBERON:0000955!3.24e-20!50;UBERON:0006238!3.24e-20!50;UBERON:0002346!5.84e-20!71;UBERON:0003075!5.84e-20!71;UBERON:0007284!5.84e-20!71;UBERON:0002616!1.31e-19!49;UBERON:0003080!1.03e-14!40;UBERON:0003056!1.58e-14!49;UBERON:0002780!4.22e-14!39;UBERON:0001890!4.22e-14!39;UBERON:0006240!4.22e-14!39;UBERON:0002020!1.45e-13!34;UBERON:0002791!2.01e-11!29;UBERON:0003528!2.01e-11!29;UBERON:0001893!2.01e-11!29;UBERON:0007811!1.97e-10!86;UBERON:0000153!2.91e-09!94;UBERON:0000956!3.72e-09!21;UBERON:0001869!3.72e-09!21;UBERON:0000203!3.72e-09!21;UBERON:0000468!1.17e-07!333;UBERON:0002619!1.64e-07!17;UBERON:0002021!4.17e-07!10;UBERON:0000411!4.17e-07!10;UBERON:0001950!4.17e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.62e-30,95;UBERON:0000924,2.62e-30,95;UBERON:0006601,2.62e-30,95;UBERON:0001016,5.61e-28,75;UBERON:0001017,6.24e-27,73;UBERON:0010371,5.50e-23,73;UBERON:0000073,5.74e-23,54;UBERON:0001049,2.01e-21,52;UBERON:0005068,2.01e-21,52;UBERON:0006241,2.01e-21,52;UBERON:0007135,2.01e-21,52;UBERON:0002346,3.44e-21,64;UBERON:0003075,3.44e-21,64;UBERON:0007284,3.44e-21,64;UBERON:0000955,6.97e-19,47;UBERON:0006238,6.97e-19,47;UBERON:0010314,1.91e-18,92;UBERON:0002616,2.91e-18,46;UBERON:0003080,2.42e-15,40;UBERON:0003056,7.04e-15,49;UBERON:0002780,1.06e-14,39;UBERON:0001890,1.06e-14,39;UBERON:0006240,1.06e-14,39;UBERON:0002020,3.85e-14,34;UBERON:0003528,6.79e-12,29;UBERON:0002791,6.79e-12,29;UBERON:0001893,6.79e-12,29;UBERON:0000956,1.61e-09,21;UBERON:0001869,1.61e-09,21;UBERON:0000203,1.61e-09,21;UBERON:0002619,8.48e-08,17;UBERON:0002021,2.26e-07,10;UBERON:0000411,2.26e-07,10;UBERON:0001950,2.26e-07,10;UBERON:0004111,3.81e-07,122;UBERON:0003076,7.70e-07,12;UBERON:0003057,7.70e-07,12 | |||
|phase1_expression=59.5753711229834,0,0,0,0,0.839396359559449,0.233612640595526,0,0.281577444303333,0,0.171217968225505,0,5.47842335779858,0.174840804837995,0,0.202475267389826,4.89693314689703,0.157731082679119,0.137114433605739,0,14.4573593256819,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,11.330713617802,13.990016508293,4.22157529971868,85.2806565339363,1.52617609466313,3.95435128922049,4.86074747685709,13.5786828976602,2.87505128729943,0,0,1.00828139742739,16.7218633423366,36.6762803121609,31.455997628924,4.24864567805155,3.1739458756322,3.1691570175309,16.9422266034566,20.4537803105562,3.1496490104849,1.97773272513395,2.8419204597844,3.89480143673926,1.15265491596466,7.36196247390191,5.8052553482627,7.57169860864975,32.2785612376298,24.5164080456291,2.20483438586917,1.53352753629178,2.75765635983006,92.4973400394865,98.8299996779353,87.4021174228025,3.03338461779446,3.11057988248193,1.56274011167028,91.572023672453,39.9561453122493,52.4097989874459,14.142172102736,15.3761415263031,4.10078780815661,8.85996461998253,10.6555899750568,0,0,0,0,0,0,7.02222100658759,0,0,0,37.1826628210436,0,2.54805239706646,0,0.649473123033642,0.760079596425296,0.505524445014783,2.96878087269556,0,4.00793775475027,0.173485326766136,3.65358573974569,2.30615497256059,2.56228488939458,3.99801604261396,1.13099932196708,3.46072954828123,3.18118585223806,0.884610551949874,1.61766849947409,0.441683036920787,0.969750506270444,3.72783522436244,42.1604347696628,42.9365748967583,2.04365644166873,0,0,0,60.9647902377628,103.852636839828,5.78010019719176,66.2270659932573,66.2303034485556,105.556326636257,81.6073553230821,2.34230536855727,1.24406970610093,2.27450482590307,15.1518136238261,0.780722657776222,1.37941262660084,1.62055916824814,2.26057226753573,2.78949646520444,3.45907044769094,3.84177070694888,32.0792179716379,0.646703978798527,1.32374256117473,1.75951124163949,3.06874025398605,1.39023624612799,1.0447564995665,2.88094990971121,0.59710280045548,0,0,0,0.207125772535502,1.17263029990548,1.08037236876609,0.710234206755631,0.590292695242212,0.462801338662135,1.39520366850245,1.07309360559848,1.98501082024188,1.48103864922132,0.985004784474571,1.62137619091711,1.46199987425332,4.17145219052996,2.54992195644706,67.0824935919566,13.4805042216863,0.330418782983798,2.11560453330835,0.853153002140936,1.85789337488351,0.902072229254653,1.00841762311671,2.00140239460383,2.09248188723815,4.2707615539006,3.29397909448022,3.51869292320377,2.38747766449381,3.50935356814416,0.898819408654221,4.10662294761919,3.38540164532424,0.948339504765408,0.913988100877831,4.50830942692322,1.4255592949172,0.581857461502877,0.98190147846446,0.442655759869801,0,0.784993639206874,1.35736880313981,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,1.29708181420028,0,0,0,0,0,0,0,2.21703828199926,0.757965647081939,0,0.169745085775188,0.234690248288502,0.502518772325447,0.952174563544055,0.585400943573396,1.10344600874334,0.44292937929755,1.43509291791738,2.78567635016755,2.93564469172023,3.03763023021174,0,0,1.47529281905711,2.20749397043786,95.0459492727728,78.8834650765527,2.62295912602681,1.00988370881749,2.52406575533005,3.90438744296638,3.44677436372478,2.62865677747807,2.89638276307112,2.26461224631066,4.45291771842384,7.01414058987149,6.32460444714438,47.5555548304274,3.12268187458191,1.78065603667255,1.79175655288934,4.78413356620353,1.32745138339963,0.728341908464944,0.302323556964751,0.377210159511796,0.885905678642318,0.614870295887855,1.80899805217755,0.363533729477506,0,1.8962205476149,1.05418608574999,2.06271086496374,7.48967132658334,1.08036656418786,2.19909762430683,4.50107773566344,4.07882537377229,7.49149033928696,11.8475294833527,10.0473433207818,2.81606049676452,1.0591603543191,4.85162475720916,3.2977250588296,3.22928853391811,2.65376869683886,5.49112782414428,5.41664969158702,2.33184669303881,82.3288340926663,0.683483523191411,1.03193433981611,0,0,0,0.228778173206523,0,0,0,12.4107180341965,0.632671987162271,2.43983360552218,2.26811215725783,2.29997125615916,2.62035076495413,3.2367443132357,4.05001933054146,6.80565449158477,8.16574331738295,4.97071450469541,1.69107881605257,0.897099276263873,0.66183396182839,0.583353565032143,1.29159823477731,0.844780627453891,2.11243029562357,1.17183946359555,3.56521771047417,0.724752362478018,0.288030006257865,0,2.43270258348197,1.84879722896689,1.42912905275575,0.537080087002444,0.39736270956253,0.240390899039938,0.295379054349154,0.201932899896295,0.228620419965,0.100826185136841,0.38983152295901,0,0.116876902181569,4.76133805591944,1.10992976687032,0.448569283047378,1.51096154727671,25.8874056003135,20.8327547750812,3.11357761254351,5.78794623513478,3.51100472824754,53.0866732060043,41.8895965221531,54.9979692901821,42.4477360388908,47.955776383945,61.9422995859554,58.7269575201671,55.3895079965791,40.3296743995942,49.1872296164229,0.830298780673413,0,1.36586884603307,2.43106717068294,3.77303692730368,4.04455718590031,3.555947644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| |||
|short_description=p1@Trnp1 | |||
}} |
Revision as of 21:39, 4 August 2015
Short description: | p1@Trnp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trnp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 18bp_to_ENSMUST00000125541, NM_001081156, uc008vcu.1_5end |
EntrezGene: | 69539 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.47e-11 | 39 |
electrically active cell | 1.47e-11 | 39 |
ectodermal cell | 1.79e-11 | 44 |
neurectodermal cell | 1.79e-11 | 44 |
neural cell | 5.73e-11 | 43 |
neuron | 5.39e-09 | 33 |
neuronal stem cell | 5.39e-09 | 33 |
neuroblast | 5.39e-09 | 33 |
electrically signaling cell | 5.39e-09 | 33 |
CNS neuron (sensu Vertebrata) | 1.78e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.78e-07 | 23 |