FFCP PHASE1:Mm9::chr11:102749302..102749315,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=205 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:102749302..102749315,- | |||
|description=CAGE_peak_at_chr11:102749302..102749315,- | |description=CAGE_peak_at_chr11:102749302..102749315,- | ||
|id=chr11:102749302..102749315,- | |id=chr11:102749302..102749315,- | ||
|ontology_enrichment_celltype=CL:0002453!5.01e-18!8;CL:0000333!3.34e-14!10;CL:0000095!3.34e-14!10;CL:0000243!3.34e-14!10;CL:0000123!3.34e-14!10;CL:0000125!3.34e-14!10;CL:0000030!3.34e-14!10;CL:0000339!3.34e-14!10;CL:0002319!5.52e-14!43;CL:0000221!1.39e-13!44;CL:0000133!1.39e-13!44;CL:0000128!1.91e-12!6;CL:0000126!1.91e-12!6;CL:0000127!1.91e-12!6;CL:0000055!1.60e-11!50;CL:0002614!3.16e-09!3;CL:0000117!1.93e-08!23;CL:0000337!1.93e-08!23;CL:0000864!2.29e-07!2;CL:0000878!2.29e-07!2;CL:0000129!2.29e-07!2;CL:0002604!3.01e-07!2;CL:0002605!3.01e-07!2;CL:0002321!3.16e-07!70;CL:0000220!3.16e-07!70;CL:0002611!4.21e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.85e-36,8;CL:0000333,6.38e-29,10;CL:0000095,6.38e-29,10;CL:0000243,6.38e-29,10;CL:0000123,6.38e-29,10;CL:0000125,6.38e-29,10;CL:0000030,6.38e-29,10;CL:0000339,6.38e-29,10;CL:0000128,1.52e-21,6;CL:0000126,1.52e-21,6;CL:0000127,1.52e-21,6;CL:0002319,5.23e-18,43;CL:0000878,1.07e-17,2;CL:0000129,1.07e-17,2;CL:0000221,1.38e-17,44;CL:0000133,1.38e-17,44;CL:0002605,2.26e-17,2;CL:0002604,2.26e-17,2;CL:0002611,5.72e-17,2;CL:0002321,8.44e-11,70;CL:0002194,2.53e-09,4;CL:0000766,2.53e-09,4;CL:0000234,2.53e-09,4;CL:0000576,2.53e-09,4;CL:0000235,2.53e-09,4;CL:0000864,2.53e-09,4;CL:0002009,2.53e-09,4;CL:0000040,2.53e-09,4;CL:0000559,2.53e-09,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.89e-27!73;UBERON:0005743!3.89e-27!73;UBERON:0000073!2.93e-26!75;UBERON:0001016!2.93e-26!75;UBERON:0001049!6.99e-24!52;UBERON:0005068!6.99e-24!52;UBERON:0006241!6.99e-24!52;UBERON:0007135!6.99e-24!52;UBERON:0003076!2.54e-22!12;UBERON:0003057!2.54e-22!12;UBERON:0004121!9.77e-21!102;UBERON:0000924!9.77e-21!102;UBERON:0006601!9.77e-21!102;UBERON:0000955!8.97e-20!50;UBERON:0006238!8.97e-20!50;UBERON:0002346!2.23e-19!71;UBERON:0003075!2.23e-19!71;UBERON:0007284!2.23e-19!71;UBERON:0002616!3.44e-18!49;UBERON:0000033!5.52e-18!63;UBERON:0002298!1.49e-16!6;UBERON:0002020!1.26e-15!34;UBERON:0002240!3.26e-12!6;UBERON:0005174!3.26e-12!6;UBERON:0001137!3.26e-12!6;UBERON:0007811!7.48e-12!86;UBERON:0004733!1.34e-11!6;UBERON:0004732!1.34e-11!6;UBERON:0002028!1.34e-11!6;UBERON:0007277!1.34e-11!6;UBERON:0002950!1.71e-11!4;UBERON:0001891!1.71e-11!4;UBERON:0009616!1.71e-11!4;UBERON:0000153!2.00e-10!94;UBERON:0001948!1.17e-09!5;UBERON:0002315!1.17e-09!5;UBERON:0002791!1.38e-09!29;UBERON:0003528!1.38e-09!29;UBERON:0001893!1.38e-09!29;UBERON:0003056!2.84e-09!49;UBERON:0002038!3.16e-09!3;UBERON:0002308!3.16e-09!3;UBERON:0009663!3.16e-09!3;UBERON:0009661!3.16e-09!3;UBERON:0006331!3.16e-09!3;UBERON:0000125!3.16e-09!3;UBERON:0003080!5.31e-09!40;UBERON:0000025!3.61e-08!114;UBERON:0002780!7.58e-08!39;UBERON:0001890!7.58e-08!39;UBERON:0006240!7.58e-08!39;UBERON:0004111!2.61e-07!122;UBERON:0000956!2.86e-07!21;UBERON:0001869!2.86e-07!21;UBERON:0000203!2.86e-07!21;UBERON:0002619!2.93e-07!17;UBERON:0002256!4.21e-07!2;UBERON:0002037!8.67e-07!4;UBERON:0002680!8.67e-07!4;UBERON:0001895!8.67e-07!4;UBERON:0010092!8.67e-07!4;UBERON:0006215!8.67e-07!4;UBERON:0001954!8.75e-07!7;UBERON:0003022!8.75e-07!7;UBERON:0002421!8.75e-07!7;UBERON:0000349!8.75e-07!7;UBERON:0002600!8.75e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.71e-21,6;UBERON:0005174,1.71e-21,6;UBERON:0001137,1.71e-21,6;UBERON:0002256,5.72e-17,2;UBERON:0003076,1.74e-16,12;UBERON:0003057,1.74e-16,12;UBERON:0001948,4.81e-15,5;UBERON:0002315,4.81e-15,5;UBERON:0001017,1.39e-12,73;UBERON:0001016,3.15e-12,75;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0001049,2.84e-09,52;UBERON:0005068,2.84e-09,52;UBERON:0006241,2.84e-09,52;UBERON:0007135,2.84e-09,52;UBERON:0002020,2.49e-08,34;UBERON:0002346,2.01e-07,64;UBERON:0003075,2.01e-07,64;UBERON:0007284,2.01e-07,64;UBERON:0000073,7.39e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,5.93152693383074,5.63846707315422,1.53985063787899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.08920298399693,15.3687322128622,0,0,0,3.42781181284564,1.98781686856452,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0.837548997004143,0.56276261003168,1.22238598221448,0.294628585473668,2.13557521198654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.515559547031063,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,5.93152693383074,5.63846707315422,1.53985063787899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.08920298399693,15.3687322128622,0,0,0,3.42781181284564,1.98781686856452,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0.837548997004143,0.56276261003168,1.22238598221448,0.294628585473668,2.13557521198654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.515559547031063,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:102749302..102749315,- | |short_description=p@chr11:102749302..102749315,- | ||
}} | }} |
Latest revision as of 05:52, 5 August 2015
Short description: | p@chr11:102749302..102749315, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:102749302..102749315, - |
Coexpression cluster: | MCL_coexpression_mm9:205 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.85e-36 | 8 |
migratory neural crest cell | 6.38e-29 | 10 |
neuron associated cell | 6.38e-29 | 10 |
glial cell (sensu Vertebrata) | 6.38e-29 | 10 |
neuron associated cell (sensu Vertebrata) | 6.38e-29 | 10 |
glial cell | 6.38e-29 | 10 |
glioblast | 6.38e-29 | 10 |
glioblast (sensu Vertebrata) | 6.38e-29 | 10 |
oligodendrocyte | 1.52e-21 | 6 |
macroglial cell | 1.52e-21 | 6 |
astrocyte | 1.52e-21 | 6 |
neural cell | 5.23e-18 | 43 |
central nervous system macrophage | 1.07e-17 | 2 |
microglial cell | 1.07e-17 | 2 |
ectodermal cell | 1.38e-17 | 44 |
neurectodermal cell | 1.38e-17 | 44 |
astrocyte of the cerebral cortex | 2.26e-17 | 2 |
astrocyte of the hippocampus | 2.26e-17 | 2 |
neuron of the dorsal spinal cord | 5.72e-17 | 2 |
embryonic cell | 8.44e-11 | 70 |
monopoietic cell | 2.53e-09 | 4 |
myeloid leukocyte | 2.53e-09 | 4 |
phagocyte | 2.53e-09 | 4 |
monocyte | 2.53e-09 | 4 |
macrophage | 2.53e-09 | 4 |
tissue-resident macrophage | 2.53e-09 | 4 |
macrophage dendritic cell progenitor | 2.53e-09 | 4 |
monoblast | 2.53e-09 | 4 |
promonocyte | 2.53e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.71e-21 | 6 |
dorsal region element | 1.71e-21 | 6 |
dorsum | 1.71e-21 | 6 |
dorsal horn of spinal cord | 5.72e-17 | 2 |
posterior neural tube | 1.74e-16 | 12 |
chordal neural plate | 1.74e-16 | 12 |
regional part of spinal cord | 4.81e-15 | 5 |
gray matter of spinal cord | 4.81e-15 | 5 |
central nervous system | 1.39e-12 | 73 |
nervous system | 3.15e-12 | 75 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
neural tube | 2.84e-09 | 52 |
neural rod | 2.84e-09 | 52 |
future spinal cord | 2.84e-09 | 52 |
neural keel | 2.84e-09 | 52 |
gray matter | 2.49e-08 | 34 |
neurectoderm | 2.01e-07 | 64 |
neural plate | 2.01e-07 | 64 |
presumptive neural plate | 2.01e-07 | 64 |
regional part of nervous system | 7.39e-07 | 54 |