FFCP PHASE1:Mm9::chr9:57492995..57493014,-: Difference between revisions
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{{FFCP|EntrezGene=12988|HGNC=|MCL_coexpression_id=165|UniProt=P41241|association_with_transcript=-8bp_to_NM_007783,uc009pvk.1_5end|description=CAGE_peak_2_at_Csk_5end|id=chr9:57492995..57493014,-|ontology_enrichment_celltype=CL:0002320!2.59e-14!46;CL:0000134!2.59e-14!46;CL:0000988!1.71e-13!32;CL:0002032!1.71e-13!32;CL:0000037!1.71e-13!32;CL:0000566!1.71e-13!32;CL:0000837!1.71e-13!32;CL:0002031!2.65e-12!25;CL:0000219!4.69e-11!54;CL:0000738!1.80e-08!17;CL:0002087!1.80e-08!17;CL:0000049!3.62e-08!19;CL:0000838!2.15e-07!12;CL:0000763!5.63e-07!16;CL:0000084!9.98e-07!11;CL:0000827!9.98e-07!11|ontology_enrichment_celltype_v019_2=CL:0002320,2.21e-14,46;CL:0000134,2.21e-14,46;CL:0000988,1.36e-13,32;CL:0002032,1.36e-13,32;CL:0000037,1.36e-13,32;CL:0000837,1.36e-13,32;CL:0002031,2.09e-12,25;CL:0000219,4.13e-11,54;CL:0000738,1.77e-08,17;CL:0002087,1.77e-08,17;CL:0000049,2.95e-08,19;CL:0000838,2.11e-07,12;CL:0000763,4.61e-07,16;CL:0000084,9.84e-07,11;CL:0000827,9.84e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!3.89e-22!70;UBERON:0002193!9.74e-21!48;UBERON:0002390!3.39e-19!45;UBERON:0003061!3.39e-19!45;UBERON:0002384!2.59e-14!46;UBERON:0005057!2.50e-12!51;UBERON:0004177!6.37e-11!29;UBERON:0003081!2.03e-09!88;UBERON:0002371!3.45e-09!16;UBERON:0003408!1.75e-08!24;UBERON:0002370!3.16e-08!23;UBERON:0000974!3.16e-08!23;UBERON:0004807!3.16e-08!23;UBERON:0005058!3.16e-08!23;UBERON:0003351!3.16e-08!23;UBERON:0009113!3.16e-08!23;UBERON:0003295!3.16e-08!23;UBERON:0009722!3.16e-08!23;UBERON:0005562!3.16e-08!23;UBERON:0007690!3.16e-08!23;UBERON:0006562!7.43e-08!24;UBERON:0001557!7.43e-08!24;UBERON:0001042!7.43e-08!24;UBERON:0008814!7.43e-08!24;UBERON:0009145!7.43e-08!24;UBERON:0001474!1.73e-07!22;UBERON:0004765!1.73e-07!22;UBERON:0001434!1.73e-07!22;UBERON:0005911!2.99e-07!69;UBERON:0001004!4.58e-07!42;UBERON:0000065!8.12e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.11e-21,48;UBERON:0002405,6.11e-21,48;UBERON:0002390,2.14e-19,45;UBERON:0003061,2.14e-19,45;UBERON:0002384,2.21e-14,46;UBERON:0004177,4.32e-11,29;UBERON:0005057,4.32e-11,29;UBERON:0000077,8.00e-10,35;UBERON:0001041,1.75e-09,80;UBERON:0002371,3.37e-09,16;UBERON:0003081,6.58e-09,87;UBERON:0003408,1.22e-08,24;UBERON:0002370,2.20e-08,23;UBERON:0000974,2.20e-08,23;UBERON:0004807,2.20e-08,23;UBERON:0005058,2.20e-08,23;UBERON:0003351,2.20e-08,23;UBERON:0009113,2.20e-08,23;UBERON:0003295,2.20e-08,23;UBERON:0009722,2.20e-08,23;UBERON:0005562,2.20e-08,23;UBERON:0007690,2.20e-08,23;UBERON:0006562,5.26e-08,24;UBERON:0001557,5.26e-08,24;UBERON:0001042,5.26e-08,24;UBERON:0008814,5.26e-08,24;UBERON:0009145,5.26e-08,24;UBERON:0001474,1.52e-07,22;UBERON:0004765,1.52e-07,22;UBERON:0001434,1.52e-07,22;UBERON:0005911,2.40e-07,69;UBERON:0004119,3.42e-07,118;UBERON:0000925,3.42e-07,118;UBERON:0006595,3.42e-07,118;UBERON:0001004,3.83e-07,42;UBERON:0001007,4.01e-07,116;UBERON:0001555,4.01e-07,116;UBERON:0007026,4.01e-07,116;UBERON:0000065,6.80e-07,41;UBERON:0002204,9.69e-07,32|phase1_expression=0.320297694209588,1.39590163055744,1.81999695755814,1.81478526784098,0.500895729946347,2.35030980676646,2.33612640595526,34.734174005784,5.91312633037,11.0010327371337,11.3003859028833,15.3162545271046,30.3025291978234,34.00653654099,16.6554880907831,13.5658429151183,10.4934281719222,55.9945343510872,49.6354249652774,45.8340823941873,3.74190476664707,15.0922245825346,9.40319240900167,9.11956809922418,8.94696196161963,1.72269589234506,1.29228598847722,1.50829862880122,2.09025761402011,1.26015064879965,2.66076612786366,17.14582818341,15.9916844771988,0,1.1554064790051,1.82858109894342,1.02084678131185,41.016099812217,26.5654017138092,29.8408534065065,40.58797267414,41.6657745824652,36.8987868303677,1.76255545165808,1.4192770370732,1.46837401729345,3.9119567217402,2.61630187656536,1.31811709640683,1.1665793944457,2.37976916763116,1.43752564364972,45.3013036355888,22.4862264023517,26.8875039313971,3.60163210450326,3.43840127926508,3.09403255366465,0.809265843438391,1.05798195854407,2.53532561402472,2.37191172448392,2.66788438833342,29.2467408116455,36.5880554149781,31.2611250576284,15.579205746957,7.68436610643109,1.45165457231869,1.89008313664367,1.47227472945967,2.85650984403804,1.76694832761291,1.71487118900936,1.91690942036473,0,0,0.510749352340751,0.614426133024974,1.71452174049252,2.01272815925301,1.56274011167028,1.11673199600552,0,1.22238598221448,5.59794312399969,2.98980529678116,1.67759501242771,1.81742863999642,1.88928900266964,4.63783181922684,2.58127163094416,0.679971333707751,3.77792234146472,5.19821133958135,3.58421509677868,4.77511028447956,4.77204903218562,6.49465011507172,4.24007489412408,0.563373679106722,0,0,7.11066703153331,0.865964164044856,1.26679932737549,0.505524445014783,7.19358442230078,37.8049310124871,4.15637989381509,2.60227990149204,2.74018930480927,2.53677046981664,1.3565037649736,1.41106448562846,2.26199864393416,5.19109432242185,4.19338135067744,15.0383793831479,3.23533699894818,6.8460870722722,5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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12988 | |||
|HGNC= | |||
|MCL_coexpression_id=165 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P41241 | |||
|association_with_transcript=-8bp_to_NM_007783,uc009pvk.1_5end | |||
|cluster_id=chr9:57492995..57493014,- | |||
|description=CAGE_peak_2_at_Csk_5end | |||
|id=chr9:57492995..57493014,- | |||
|ontology_enrichment_celltype=CL:0002320!2.59e-14!46;CL:0000134!2.59e-14!46;CL:0000988!1.71e-13!32;CL:0002032!1.71e-13!32;CL:0000037!1.71e-13!32;CL:0000566!1.71e-13!32;CL:0000837!1.71e-13!32;CL:0002031!2.65e-12!25;CL:0000219!4.69e-11!54;CL:0000738!1.80e-08!17;CL:0002087!1.80e-08!17;CL:0000049!3.62e-08!19;CL:0000838!2.15e-07!12;CL:0000763!5.63e-07!16;CL:0000084!9.98e-07!11;CL:0000827!9.98e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.21e-14,46;CL:0000134,2.21e-14,46;CL:0000988,1.36e-13,32;CL:0002032,1.36e-13,32;CL:0000037,1.36e-13,32;CL:0000837,1.36e-13,32;CL:0002031,2.09e-12,25;CL:0000219,4.13e-11,54;CL:0000738,1.77e-08,17;CL:0002087,1.77e-08,17;CL:0000049,2.95e-08,19;CL:0000838,2.11e-07,12;CL:0000763,4.61e-07,16;CL:0000084,9.84e-07,11;CL:0000827,9.84e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.89e-22!70;UBERON:0002193!9.74e-21!48;UBERON:0002390!3.39e-19!45;UBERON:0003061!3.39e-19!45;UBERON:0002384!2.59e-14!46;UBERON:0005057!2.50e-12!51;UBERON:0004177!6.37e-11!29;UBERON:0003081!2.03e-09!88;UBERON:0002371!3.45e-09!16;UBERON:0003408!1.75e-08!24;UBERON:0002370!3.16e-08!23;UBERON:0000974!3.16e-08!23;UBERON:0004807!3.16e-08!23;UBERON:0005058!3.16e-08!23;UBERON:0003351!3.16e-08!23;UBERON:0009113!3.16e-08!23;UBERON:0003295!3.16e-08!23;UBERON:0009722!3.16e-08!23;UBERON:0005562!3.16e-08!23;UBERON:0007690!3.16e-08!23;UBERON:0006562!7.43e-08!24;UBERON:0001557!7.43e-08!24;UBERON:0001042!7.43e-08!24;UBERON:0008814!7.43e-08!24;UBERON:0009145!7.43e-08!24;UBERON:0001474!1.73e-07!22;UBERON:0004765!1.73e-07!22;UBERON:0001434!1.73e-07!22;UBERON:0005911!2.99e-07!69;UBERON:0001004!4.58e-07!42;UBERON:0000065!8.12e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.11e-21,48;UBERON:0002405,6.11e-21,48;UBERON:0002390,2.14e-19,45;UBERON:0003061,2.14e-19,45;UBERON:0002384,2.21e-14,46;UBERON:0004177,4.32e-11,29;UBERON:0005057,4.32e-11,29;UBERON:0000077,8.00e-10,35;UBERON:0001041,1.75e-09,80;UBERON:0002371,3.37e-09,16;UBERON:0003081,6.58e-09,87;UBERON:0003408,1.22e-08,24;UBERON:0002370,2.20e-08,23;UBERON:0000974,2.20e-08,23;UBERON:0004807,2.20e-08,23;UBERON:0005058,2.20e-08,23;UBERON:0003351,2.20e-08,23;UBERON:0009113,2.20e-08,23;UBERON:0003295,2.20e-08,23;UBERON:0009722,2.20e-08,23;UBERON:0005562,2.20e-08,23;UBERON:0007690,2.20e-08,23;UBERON:0006562,5.26e-08,24;UBERON:0001557,5.26e-08,24;UBERON:0001042,5.26e-08,24;UBERON:0008814,5.26e-08,24;UBERON:0009145,5.26e-08,24;UBERON:0001474,1.52e-07,22;UBERON:0004765,1.52e-07,22;UBERON:0001434,1.52e-07,22;UBERON:0005911,2.40e-07,69;UBERON:0004119,3.42e-07,118;UBERON:0000925,3.42e-07,118;UBERON:0006595,3.42e-07,118;UBERON:0001004,3.83e-07,42;UBERON:0001007,4.01e-07,116;UBERON:0001555,4.01e-07,116;UBERON:0007026,4.01e-07,116;UBERON:0000065,6.80e-07,41;UBERON:0002204,9.69e-07,32 | |||
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| |||
|short_description=p2@Csk | |||
}} |
Revision as of 09:08, 5 August 2015
Short description: | p2@Csk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Csk_5end |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | -8bp_to_NM_007783, uc009pvk.1_5end |
EntrezGene: | 12988 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.21e-14 | 46 |
mesenchymal cell | 2.21e-14 | 46 |
hematopoietic cell | 1.36e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.36e-13 | 32 |
hematopoietic stem cell | 1.36e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.36e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 2.09e-12 | 25 |
motile cell | 4.13e-11 | 54 |
leukocyte | 1.77e-08 | 17 |
nongranular leukocyte | 1.77e-08 | 17 |
common myeloid progenitor | 2.95e-08 | 19 |
lymphoid lineage restricted progenitor cell | 2.11e-07 | 12 |
myeloid cell | 4.61e-07 | 16 |
T cell | 9.84e-07 | 11 |
pro-T cell | 9.84e-07 | 11 |