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FFCP PHASE1:Mm9::chr6:144157968..144157989,-: Difference between revisions

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{{FFCP|EntrezGene=20678|HGNC=|MCL_coexpression_id=76|UniProt=Q2TBA9|association_with_transcript=0bp_to_ENSMUST00000077160_5end|description=CAGE_peak_7_at_Sox5_5end|id=chr6:144157968..144157989,-|ontology_enrichment_celltype=CL:0000540!7.80e-12!33;CL:0000047!7.80e-12!33;CL:0000031!7.80e-12!33;CL:0000404!7.80e-12!33;CL:0000393!6.21e-09!39;CL:0000211!6.21e-09!39;CL:0000221!1.50e-08!44;CL:0000133!1.50e-08!44;CL:0002319!4.81e-08!43;CL:0000117!1.28e-07!23;CL:0000337!1.28e-07!23|ontology_enrichment_celltype_v019_2=CL:0002609,5.35e-12,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.98e-20!73;UBERON:0005743!7.98e-20!73;UBERON:0000073!5.26e-19!75;UBERON:0001016!5.26e-19!75;UBERON:0001049!3.07e-16!52;UBERON:0005068!3.07e-16!52;UBERON:0006241!3.07e-16!52;UBERON:0007135!3.07e-16!52;UBERON:0003080!5.48e-16!40;UBERON:0002780!7.46e-16!39;UBERON:0001890!7.46e-16!39;UBERON:0006240!7.46e-16!39;UBERON:0002020!5.25e-15!34;UBERON:0000955!8.10e-15!50;UBERON:0006238!8.10e-15!50;UBERON:0002616!2.19e-14!49;UBERON:0003056!9.45e-14!49;UBERON:0002791!1.14e-13!29;UBERON:0003528!1.14e-13!29;UBERON:0001893!1.14e-13!29;UBERON:0000033!4.28e-13!63;UBERON:0002346!4.18e-12!71;UBERON:0003075!4.18e-12!71;UBERON:0007284!4.18e-12!71;UBERON:0004121!2.53e-11!102;UBERON:0000924!2.53e-11!102;UBERON:0006601!2.53e-11!102;UBERON:0000956!1.10e-10!21;UBERON:0001869!1.10e-10!21;UBERON:0000203!1.10e-10!21;UBERON:0002619!8.18e-08!17;UBERON:0000025!1.33e-07!114;UBERON:0000153!3.93e-07!94;UBERON:0004111!4.82e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.45e-21,29;UBERON:0002791,1.45e-21,29;UBERON:0001893,1.45e-21,29;UBERON:0002780,9.46e-20,39;UBERON:0001890,9.46e-20,39;UBERON:0006240,9.46e-20,39;UBERON:0003080,4.38e-19,40;UBERON:0000956,1.19e-17,21;UBERON:0001869,1.19e-17,21;UBERON:0000203,1.19e-17,21;UBERON:0002020,1.67e-17,34;UBERON:0003056,3.00e-17,49;UBERON:0002616,1.04e-15,46;UBERON:0000955,3.13e-15,47;UBERON:0006238,3.13e-15,47;UBERON:0001049,3.97e-13,52;UBERON:0005068,3.97e-13,52;UBERON:0006241,3.97e-13,52;UBERON:0007135,3.97e-13,52;UBERON:0002346,8.61e-13,64;UBERON:0003075,8.61e-13,64;UBERON:0007284,8.61e-13,64;UBERON:0000073,2.13e-12,54;UBERON:0010371,2.32e-12,73;UBERON:0002102,4.40e-12,7;UBERON:0004710,4.40e-12,7;UBERON:0005419,4.40e-12,7;UBERON:0005417,4.40e-12,7;UBERON:0005729,4.40e-12,7;UBERON:0002619,1.31e-11,17;UBERON:0001017,1.83e-11,73;UBERON:0001016,5.86e-11,75;UBERON:0010708,2.12e-10,8;UBERON:0000026,2.69e-10,12;UBERON:0004708,2.69e-10,12;UBERON:0002101,2.69e-10,12;UBERON:0004357,2.69e-10,12;UBERON:0004347,2.69e-10,12;UBERON:0005732,2.69e-10,12;UBERON:0005733,2.69e-10,12;UBERON:0004121,1.56e-09,95;UBERON:0000924,1.56e-09,95;UBERON:0006601,1.56e-09,95;UBERON:0010707,2.38e-09,13;UBERON:0010314,5.54e-09,92;UBERON:0000369,9.19e-09,5;UBERON:0002435,9.19e-09,5;UBERON:0000204,9.19e-09,5;UBERON:0010082,9.19e-09,5|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,13.894408049336,9.45041568321835,14.302097371894,0.856952953211411,0.883474163806454,5.63457676388789,4.98396449294829,2.75765635983006,0,0.510749352340751,0.307213066512487,2.50583946687368,1.64677758484337,1.56274011167028,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.711858403995515,0.931997229126503,0.075726193333184,0,0.289864488701678,0,0.679971333707751,1.07940638327563,0,1.34408066129201,0,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29413479957927,0.441683036920787,1.45462575940567,0,0.585561594023094,0.41889341362691,0,0,0,0,0.449371918214468,1.83000241127451,2.01046963380583,1.91206752211504,2.55715457330331,0.20778804455956,1.62241263067758,0.101839363850316,0.373220911830279,0,0,0.130120442962704,0,0,0,0.204109497453984,0.2562274405697,1.3118241438362,1.55222022443409,1.5089759505299,4.72765200419548,4.04687585577082,1.31517439456545,2.78047249225598,2.089512999133,2.67516777330327,0.199034266818493,0,0,0,0.828503090142008,0.938104239924385,1.08037236876609,0,0.196764231747404,0.308534225774757,0,0.536546802799238,0,0,0,0.0810688095458557,0,0,0,1.47202963994889,2.16099685996497,0,0,0.639864751605702,0.928946687441754,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0.296452627087149,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0,0,0.505157755894224,0.358794827043824,0.964887042726734,0,1.13694847062291,0.162964976442026,0.339490171550376,0.234690248288502,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0.94652465824877,0.780877488593277,2.58508077279359,3.34556317133573,0.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20678
|HGNC=
|MCL_coexpression_id=76
|TSSclassifier=NA
|UniProt=uniprot:Q2TBA9
|association_with_transcript=0bp_to_ENSMUST00000077160_5end
|cluster_id=chr6:144157968..144157989,-
|description=CAGE_peak_7_at_Sox5_5end
|id=chr6:144157968..144157989,-
|ontology_enrichment_celltype=CL:0000540!7.80e-12!33;CL:0000047!7.80e-12!33;CL:0000031!7.80e-12!33;CL:0000404!7.80e-12!33;CL:0000393!6.21e-09!39;CL:0000211!6.21e-09!39;CL:0000221!1.50e-08!44;CL:0000133!1.50e-08!44;CL:0002319!4.81e-08!43;CL:0000117!1.28e-07!23;CL:0000337!1.28e-07!23
|ontology_enrichment_celltype_v019_2=CL:0002609,5.35e-12,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.98e-20!73;UBERON:0005743!7.98e-20!73;UBERON:0000073!5.26e-19!75;UBERON:0001016!5.26e-19!75;UBERON:0001049!3.07e-16!52;UBERON:0005068!3.07e-16!52;UBERON:0006241!3.07e-16!52;UBERON:0007135!3.07e-16!52;UBERON:0003080!5.48e-16!40;UBERON:0002780!7.46e-16!39;UBERON:0001890!7.46e-16!39;UBERON:0006240!7.46e-16!39;UBERON:0002020!5.25e-15!34;UBERON:0000955!8.10e-15!50;UBERON:0006238!8.10e-15!50;UBERON:0002616!2.19e-14!49;UBERON:0003056!9.45e-14!49;UBERON:0002791!1.14e-13!29;UBERON:0003528!1.14e-13!29;UBERON:0001893!1.14e-13!29;UBERON:0000033!4.28e-13!63;UBERON:0002346!4.18e-12!71;UBERON:0003075!4.18e-12!71;UBERON:0007284!4.18e-12!71;UBERON:0004121!2.53e-11!102;UBERON:0000924!2.53e-11!102;UBERON:0006601!2.53e-11!102;UBERON:0000956!1.10e-10!21;UBERON:0001869!1.10e-10!21;UBERON:0000203!1.10e-10!21;UBERON:0002619!8.18e-08!17;UBERON:0000025!1.33e-07!114;UBERON:0000153!3.93e-07!94;UBERON:0004111!4.82e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.45e-21,29;UBERON:0002791,1.45e-21,29;UBERON:0001893,1.45e-21,29;UBERON:0002780,9.46e-20,39;UBERON:0001890,9.46e-20,39;UBERON:0006240,9.46e-20,39;UBERON:0003080,4.38e-19,40;UBERON:0000956,1.19e-17,21;UBERON:0001869,1.19e-17,21;UBERON:0000203,1.19e-17,21;UBERON:0002020,1.67e-17,34;UBERON:0003056,3.00e-17,49;UBERON:0002616,1.04e-15,46;UBERON:0000955,3.13e-15,47;UBERON:0006238,3.13e-15,47;UBERON:0001049,3.97e-13,52;UBERON:0005068,3.97e-13,52;UBERON:0006241,3.97e-13,52;UBERON:0007135,3.97e-13,52;UBERON:0002346,8.61e-13,64;UBERON:0003075,8.61e-13,64;UBERON:0007284,8.61e-13,64;UBERON:0000073,2.13e-12,54;UBERON:0010371,2.32e-12,73;UBERON:0002102,4.40e-12,7;UBERON:0004710,4.40e-12,7;UBERON:0005419,4.40e-12,7;UBERON:0005417,4.40e-12,7;UBERON:0005729,4.40e-12,7;UBERON:0002619,1.31e-11,17;UBERON:0001017,1.83e-11,73;UBERON:0001016,5.86e-11,75;UBERON:0010708,2.12e-10,8;UBERON:0000026,2.69e-10,12;UBERON:0004708,2.69e-10,12;UBERON:0002101,2.69e-10,12;UBERON:0004357,2.69e-10,12;UBERON:0004347,2.69e-10,12;UBERON:0005732,2.69e-10,12;UBERON:0005733,2.69e-10,12;UBERON:0004121,1.56e-09,95;UBERON:0000924,1.56e-09,95;UBERON:0006601,1.56e-09,95;UBERON:0010707,2.38e-09,13;UBERON:0010314,5.54e-09,92;UBERON:0000369,9.19e-09,5;UBERON:0002435,9.19e-09,5;UBERON:0000204,9.19e-09,5;UBERON:0010082,9.19e-09,5
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,13.894408049336,9.45041568321835,14.302097371894,0.856952953211411,0.883474163806454,5.63457676388789,4.98396449294829,2.75765635983006,0,0.510749352340751,0.307213066512487,2.50583946687368,1.64677758484337,1.56274011167028,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.711858403995515,0.931997229126503,0.075726193333184,0,0.289864488701678,0,0.679971333707751,1.07940638327563,0,1.34408066129201,0,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29413479957927,0.441683036920787,1.45462575940567,0,0.585561594023094,0.41889341362691,0,0,0,0,0.449371918214468,1.83000241127451,2.01046963380583,1.91206752211504,2.55715457330331,0.20778804455956,1.62241263067758,0.101839363850316,0.373220911830279,0,0,0.130120442962704,0,0,0,0.204109497453984,0.2562274405697,1.3118241438362,1.55222022443409,1.5089759505299,4.72765200419548,4.04687585577082,1.31517439456545,2.78047249225598,2.089512999133,2.67516777330327,0.199034266818493,0,0,0,0.828503090142008,0.938104239924385,1.08037236876609,0,0.196764231747404,0.308534225774757,0,0.536546802799238,0,0,0,0.0810688095458557,0,0,0,1.47202963994889,2.16099685996497,0,0,0.639864751605702,0.928946687441754,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0.296452627087149,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0,0,0.505157755894224,0.358794827043824,0.964887042726734,0,1.13694847062291,0.162964976442026,0.339490171550376,0.234690248288502,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0.94652465824877,0.780877488593277,2.58508077279359,3.34556317133573,0.891194696329576,1.69845918473299,0.809621403349789,0.876767573733936,0.395287777946524,0.963963949265421,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,3.24109969256358,0.517434735131018,0.428674070063185,0.354680467284547,0.535106452806212,1.15184314421485,0.304464949114599,0,0,0,0,0.161464426695906,0.180938774784468,0,0,0,0.18542530201051,0,0.206386867963223,0,0.188368457004691,0,0,0,0.279902904647316,0,0,0.632671987162271,1.01659733563424,0.432021363287205,0.418176592028937,0,0.269728692769641,0,0,0,0,0,0.299033092087958,0.330916980914195,0,0.129159823477731,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,1.12950368523413,3.22227665555024,1.14579102687879,1.20297227640581,1.37016503954128,0.755393897389701,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,0.518936737920883,0.399024873401031,2.04880326904961,1.45864030240976,1.46729213839588,0.367687016900028,1.11123363900808,0.412070114477788,0.320919209591815,1.01078884705519,0.50695859978048,0.565879024158229,0.655490552289177,0.960377286073039,0.976402972245426,1.42888107384922,0.463537303779422,0.77163688185482,0.412085900803307,0.883193520806384,0.342869252385415,0.532427418478012,0.476872379894642,0.872078499793971,0.752875043322645,0.676916863133412,1.28049581010941,0.526139422875686,0.814824683075171,0.561142271657738,0.949080144993393,0.985044823755635,0,1.08455788830176,1.35034627686799,0.499621155875892,0.467863216890817,0.644613162144895,1.53030665655075,0.661774257358546,0.695603506861264
|short_description=p7@Sox5
}}

Revision as of 09:36, 5 August 2015

Short description:p7@Sox5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Sox5_5end
Coexpression cluster:MCL_coexpression_mm9:76
Association with transcript: 0bp_to_ENSMUST00000077160_5end
EntrezGene:20678
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p7@Sox5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.89
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.98
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of cerebral cortex5.35e-126

Uber anatomy
Ontology termp-valuen
brain grey matter1.45e-2129
regional part of telencephalon1.45e-2129
telencephalon1.45e-2129
regional part of forebrain9.46e-2039
forebrain9.46e-2039
future forebrain9.46e-2039
anterior neural tube4.38e-1940
cerebral cortex1.19e-1721
cerebral hemisphere1.19e-1721
pallium1.19e-1721
gray matter1.67e-1734
pre-chordal neural plate3.00e-1749
regional part of brain1.04e-1546
brain3.13e-1547
future brain3.13e-1547
neural tube3.97e-1352
neural rod3.97e-1352
future spinal cord3.97e-1352
neural keel3.97e-1352
neurectoderm8.61e-1364
neural plate8.61e-1364
presumptive neural plate8.61e-1364
regional part of nervous system2.13e-1254
ecto-epithelium2.32e-1273
forelimb4.40e-127
pectoral appendage4.40e-127
pectoral appendage bud4.40e-127
forelimb bud4.40e-127
forelimb/pectoral fin field4.40e-127
regional part of cerebral cortex1.31e-1117
central nervous system1.83e-1173
nervous system5.86e-1175
pectoral complex2.12e-108
appendage2.69e-1012
paired limb/fin2.69e-1012
limb2.69e-1012
paired limb/fin bud2.69e-1012
limb bud2.69e-1012
limb/fin field2.69e-1012
limb field2.69e-1012
ectoderm-derived structure1.56e-0995
ectoderm1.56e-0995
presumptive ectoderm1.56e-0995
appendage girdle complex2.38e-0913
structure with developmental contribution from neural crest5.54e-0992
corpus striatum9.19e-095
striatum9.19e-095
ventral part of telencephalon9.19e-095
future corpus striatum9.19e-095
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