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FFCP PHASE1:Mm9::chr9:58488544..58488566,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=168
|MCL_coexpression_id=168
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr9:58488544..58488566,+
|description=CAGE_peak_at_chr9:58488544..58488566,+
|description=CAGE_peak_at_chr9:58488544..58488566,+
|id=chr9:58488544..58488566,+
|id=chr9:58488544..58488566,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000393,1.51e-08,39;CL:0000211,1.51e-08,39;CL:0002610,1.46e-07,3;CL:0000117,2.13e-07,23;CL:0000337,2.13e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.40e-09!73;UBERON:0005743!2.40e-09!73;UBERON:0001049!4.58e-09!52;UBERON:0005068!4.58e-09!52;UBERON:0006241!4.58e-09!52;UBERON:0007135!4.58e-09!52;UBERON:0000073!6.94e-09!75;UBERON:0001016!6.94e-09!75;UBERON:0000955!1.31e-08!50;UBERON:0006238!1.31e-08!50;UBERON:0002616!3.21e-08!49;UBERON:0000033!1.97e-07!63;UBERON:0002020!3.77e-07!34;UBERON:0002021!9.83e-07!10;UBERON:0000411!9.83e-07!10;UBERON:0001950!9.83e-07!10
|ontology_enrichment_uberon=UBERON:0001017!2.40e-09!73;UBERON:0005743!2.40e-09!73;UBERON:0001049!4.58e-09!52;UBERON:0005068!4.58e-09!52;UBERON:0006241!4.58e-09!52;UBERON:0007135!4.58e-09!52;UBERON:0000073!6.94e-09!75;UBERON:0001016!6.94e-09!75;UBERON:0000955!1.31e-08!50;UBERON:0006238!1.31e-08!50;UBERON:0002616!3.21e-08!49;UBERON:0000033!1.97e-07!63;UBERON:0002020!3.77e-07!34;UBERON:0002021!9.83e-07!10;UBERON:0000411!9.83e-07!10;UBERON:0001950!9.83e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.94e-19,54;UBERON:0001017,4.15e-16,73;UBERON:0001049,4.93e-16,52;UBERON:0005068,4.93e-16,52;UBERON:0006241,4.93e-16,52;UBERON:0007135,4.93e-16,52;UBERON:0001016,1.71e-15,75;UBERON:0003076,4.93e-15,12;UBERON:0003057,4.93e-15,12;UBERON:0002346,6.10e-12,64;UBERON:0003075,6.10e-12,64;UBERON:0007284,6.10e-12,64;UBERON:0002020,4.42e-11,34;UBERON:0002616,7.37e-11,46;UBERON:0004121,8.84e-11,95;UBERON:0000924,8.84e-11,95;UBERON:0006601,8.84e-11,95;UBERON:0000955,1.56e-10,47;UBERON:0006238,1.56e-10,47;UBERON:0002021,1.75e-10,10;UBERON:0000411,1.75e-10,10;UBERON:0001950,1.75e-10,10;UBERON:0010371,8.99e-10,73;UBERON:0000025,1.83e-08,114;UBERON:0004733,2.11e-08,6;UBERON:0004732,2.11e-08,6;UBERON:0002028,2.11e-08,6;UBERON:0007277,2.11e-08,6;UBERON:0010314,2.94e-08,92;UBERON:0002240,3.80e-08,6;UBERON:0005174,3.80e-08,6;UBERON:0001137,3.80e-08,6;UBERON:0004684,1.46e-07,3;UBERON:0002275,1.46e-07,3;UBERON:0004111,1.82e-07,122;UBERON:0002619,3.37e-07,17;UBERON:0003528,4.14e-07,29;UBERON:0002791,4.14e-07,29;UBERON:0001893,4.14e-07,29;UBERON:0001948,9.47e-07,5;UBERON:0002315,9.47e-07,5
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0.233612640595526,0,0.563154888606667,0.468129052643987,0,0.0797721589953364,0.171200729931206,0.262261207256992,0,0.202475267389826,0.699561878128147,0.315462165358238,0.274228867211478,0,0.935476191661768,0.0992909512008853,0,0.319984845586813,0,0,0,0,1.14014051673824,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,1.88845226963366,1.52065396829272,0.917733760808408,0,1.09012578190223,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0,0,1.02903774414379,0.573066879877513,2.06268836910977,0.809265843438391,1.05798195854407,0,0.677689064138264,0,0.449949858640699,1.97773272513395,1.4209602298922,0.599200221036809,0.768436610643109,0.103689612308478,0.540023753326763,0,1.71390590642282,1.76694832761291,0.122490799214954,0.191690942036473,0,2.20231761998777,2.55374676170375,3.5329502648936,0.263772575460388,0.457438218012048,0,3.35019598801657,0.56276261003168,2.59757021220577,2.06240009831567,1.70846016958924,0.372798891650601,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0.649776417447669,0,0.421333260395256,0.852151612890289,0.779358013808606,1.06001872353102,0.14084341977668,0,2.54805239706646,0,0.649473123033642,2.02687892380079,1.51657333504435,0.34255163915718,0.258937883647172,0,0.173485326766136,0.608930956624282,0,0,0.23517741427141,0,0.494389935468748,0,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,0,2.34224637609238,8.79676168616511,0.255457055208591,0.11981512450592,0.599902730993408,0.127070227073065,0.748953197024114,1.83000241127451,0.376963056338593,0.695297280769106,2.30143911597297,1.66230435647648,1.1356888414743,0.305518091550949,0.870848794270651,0.505445516867349,0.210441855886474,0,0.689706313300419,0.180062129805349,0.452114453507145,0.136072998302656,0.2562274405697,0.0937017245597288,0.258703370739016,0,0.378212160335639,0,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,0.51469581422943,0.568326998791185,0.207125772535502,0,0.180062061461015,0.710234206755631,0.590292695242212,0.462801338662135,0.465067889500816,0,0.700592054203017,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0.402619256281115,1.47202963994889,0.308713837137853,0.660837565967596,0,0,0,0,0,0.22237804384487,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0,0,2.25415471346161,0,0.387904974335251,0.210407459670956,0.189709611372772,0.295220295959204,0.470996183524124,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0.482354319504834,0,0.287696137450811,0.162135226775035,1.37280706594041,0,1.11642284300551,0,0.505157755894224,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0,0.238043640886014,0.390267295715598,0,0.221464689648775,0.318909537314974,0.491589944147214,0.518054945597687,0.289298117163023,6.03165135757089,1.08781136763742,0,0,1.60550589987792,1.17211686592203,0.163934945376675,0,0,0.390438744296638,0,0.238968797952552,0.668396022247182,0,0,1.46127928955656,0,0.963963949265421,0.709700426041343,0.178065603667255,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0,0.535106452806212,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.582961673259701,1.11255181206306,0.683483523191411,0.412773735926445,0.370389054739423,0.376736914009382,0.546776910884101,0.457556346413045,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.648074866458964,0.621339313086926,0.56369293868419,0.149516546043979,0,0,0,0,0.117357238645754,0.39061315453185,0.314578033277133,0.241584120826006,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0.15241361331,0,0.38983152295901,0.0962118416403295,0.116876902181569,0,0,0,0.335769232728157,0.19318959403219,0.375364950902364,0.36630324853453,0.428736758158132,0,3.3885110557024,5.52390283808612,2.86447756719698,2.06223818812425,4.11049511862385,0.755393897389701,0.675022500231806,1.80128481289688,0.453142408984205,2.5888015587591,0,0,0,0,0,0,0.888986911206461,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0.347652977834566,0,0.824171801606613,0,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.154936841185966,0,0.749431733813838,0,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0.233612640595526,0,0.563154888606667,0.468129052643987,0,0.0797721589953364,0.171200729931206,0.262261207256992,0,0.202475267389826,0.699561878128147,0.315462165358238,0.274228867211478,0,0.935476191661768,0.0992909512008853,0,0.319984845586813,0,0,0,0,1.14014051673824,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,1.88845226963366,1.52065396829272,0.917733760808408,0,1.09012578190223,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0,0,1.02903774414379,0.573066879877513,2.06268836910977,0.809265843438391,1.05798195854407,0,0.677689064138264,0,0.449949858640699,1.97773272513395,1.4209602298922,0.599200221036809,0.768436610643109,0.103689612308478,0.540023753326763,0,1.71390590642282,1.76694832761291,0.122490799214954,0.191690942036473,0,2.20231761998777,2.55374676170375,3.5329502648936,0.263772575460388,0.457438218012048,0,3.35019598801657,0.56276261003168,2.59757021220577,2.06240009831567,1.70846016958924,0.372798891650601,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0.649776417447669,0,0.421333260395256,0.852151612890289,0.779358013808606,1.06001872353102,0.14084341977668,0,2.54805239706646,0,0.649473123033642,2.02687892380079,1.51657333504435,0.34255163915718,0.258937883647172,0,0.173485326766136,0.608930956624282,0,0,0.23517741427141,0,0.494389935468748,0,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,0,2.34224637609238,8.79676168616511,0.255457055208591,0.11981512450592,0.599902730993408,0.127070227073065,0.748953197024114,1.83000241127451,0.376963056338593,0.695297280769106,2.30143911597297,1.66230435647648,1.1356888414743,0.305518091550949,0.870848794270651,0.505445516867349,0.210441855886474,0,0.689706313300419,0.180062129805349,0.452114453507145,0.136072998302656,0.2562274405697,0.0937017245597288,0.258703370739016,0,0.378212160335639,0,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,0.51469581422943,0.568326998791185,0.207125772535502,0,0.180062061461015,0.710234206755631,0.590292695242212,0.462801338662135,0.465067889500816,0,0.700592054203017,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0.402619256281115,1.47202963994889,0.308713837137853,0.660837565967596,0,0,0,0,0,0.22237804384487,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0,0,2.25415471346161,0,0.387904974335251,0.210407459670956,0.189709611372772,0.295220295959204,0.470996183524124,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0.482354319504834,0,0.287696137450811,0.162135226775035,1.37280706594041,0,1.11642284300551,0,0.505157755894224,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0,0.238043640886014,0.390267295715598,0,0.221464689648775,0.318909537314974,0.491589944147214,0.518054945597687,0.289298117163023,6.03165135757089,1.08781136763742,0,0,1.60550589987792,1.17211686592203,0.163934945376675,0,0,0.390438744296638,0,0.238968797952552,0.668396022247182,0,0,1.46127928955656,0,0.963963949265421,0.709700426041343,0.178065603667255,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0,0.535106452806212,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.582961673259701,1.11255181206306,0.683483523191411,0.412773735926445,0.370389054739423,0.376736914009382,0.546776910884101,0.457556346413045,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.648074866458964,0.621339313086926,0.56369293868419,0.149516546043979,0,0,0,0,0.117357238645754,0.39061315453185,0.314578033277133,0.241584120826006,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0.15241361331,0,0.38983152295901,0.0962118416403295,0.116876902181569,0,0,0,0.335769232728157,0.19318959403219,0.375364950902364,0.36630324853453,0.428736758158132,0,3.3885110557024,5.52390283808612,2.86447756719698,2.06223818812425,4.11049511862385,0.755393897389701,0.675022500231806,1.80128481289688,0.453142408984205,2.5888015587591,0,0,0,0,0,0,0.888986911206461,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0.347652977834566,0,0.824171801606613,0,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.154936841185966,0,0.749431733813838,0,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p@chr9:58488544..58488566,+
|short_description=p@chr9:58488544..58488566,+
}}
}}

Latest revision as of 09:56, 5 August 2015

Short description:p@chr9:58488544..58488566, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr9:58488544..58488566, +
Coexpression cluster:MCL_coexpression_mm9:168
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr9:58488544..58488566+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I28.80
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.94e-1954
central nervous system4.15e-1673
neural tube4.93e-1652
neural rod4.93e-1652
future spinal cord4.93e-1652
neural keel4.93e-1652
nervous system1.71e-1575
posterior neural tube4.93e-1512
chordal neural plate4.93e-1512
neurectoderm6.10e-1264
neural plate6.10e-1264
presumptive neural plate6.10e-1264
gray matter4.42e-1134
regional part of brain7.37e-1146
ectoderm-derived structure8.84e-1195
ectoderm8.84e-1195
presumptive ectoderm8.84e-1195
brain1.56e-1047
future brain1.56e-1047
occipital lobe1.75e-1010
visual cortex1.75e-1010
neocortex1.75e-1010
ecto-epithelium8.99e-1073
tube1.83e-08114
segmental subdivision of hindbrain2.11e-086
segmental subdivision of nervous system2.11e-086
hindbrain2.11e-086
presumptive hindbrain2.11e-086
structure with developmental contribution from neural crest2.94e-0892
spinal cord3.80e-086
dorsal region element3.80e-086
dorsum3.80e-086
raphe nuclei1.46e-073
reticular formation1.46e-073
anatomical conduit1.82e-07122
regional part of cerebral cortex3.37e-0717
brain grey matter4.14e-0729
regional part of telencephalon4.14e-0729
telencephalon4.14e-0729
regional part of spinal cord9.47e-075
gray matter of spinal cord9.47e-075
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