FFCP PHASE1:Mm9::chr7:75409731..75409742,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr7:75409731..75409742,+ to FFCP PHASE1:Mm9::chr7:75409731..75409742,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1887 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:75409731..75409742,+ | |||
|description=CAGE_peak_at_chr7:75409731..75409742,+ | |||
|id=chr7:75409731..75409742,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.34e-25!9;CL:0000789!2.34e-25!9;CL:0002420!2.34e-25!9;CL:0002419!2.34e-25!9;CL:0000790!2.34e-25!9;CL:0000838!8.24e-23!12;CL:0000624!2.12e-22!8;CL:0000542!6.59e-21!13;CL:0000051!6.59e-21!13;CL:0000084!1.89e-20!11;CL:0000827!1.89e-20!11;CL:0002031!9.10e-17!25;CL:0000893!1.58e-16!6;CL:0002489!1.58e-16!6;CL:0000898!1.58e-16!6;CL:0000809!1.58e-16!6;CL:0000810!1.58e-16!6;CL:0000895!1.58e-16!6;CL:0000808!1.58e-16!6;CL:0000894!1.58e-16!6;CL:0000806!1.58e-16!6;CL:0000807!1.58e-16!6;CL:0000805!1.58e-16!6;CL:0002425!1.58e-16!6;CL:0002436!1.58e-16!6;CL:0002427!1.58e-16!6;CL:0002428!1.58e-16!6;CL:0002429!1.58e-16!6;CL:0002433!1.58e-16!6;CL:0002431!1.58e-16!6;CL:0002432!1.58e-16!6;CL:0000738!1.56e-15!17;CL:0002087!1.56e-15!17;CL:0000988!1.67e-12!32;CL:0002032!1.67e-12!32;CL:0000037!1.67e-12!32;CL:0000566!1.67e-12!32;CL:0000837!1.67e-12!32;CL:0002320!6.90e-08!46;CL:0000134!6.90e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.14e-23,9;CL:0000789,9.14e-23,9;CL:0002420,9.14e-23,9;CL:0002419,9.14e-23,9;CL:0000790,9.14e-23,9;CL:0000084,1.17e-18,11;CL:0000827,1.17e-18,11;CL:0000838,4.10e-17,12;CL:0000624,1.27e-16,8;CL:0000542,8.32e-16,13;CL:0000051,8.32e-16,13;CL:0000738,4.17e-12,17;CL:0002087,4.17e-12,17;CL:0000625,1.19e-09,1;CL:0000815,1.44e-09,1;CL:0000792,1.44e-09,1;CL:0002031,3.08e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!8.93e-47!23;UBERON:0000974!8.93e-47!23;UBERON:0004807!8.93e-47!23;UBERON:0005058!8.93e-47!23;UBERON:0003351!8.93e-47!23;UBERON:0009113!8.93e-47!23;UBERON:0003295!8.93e-47!23;UBERON:0009722!8.93e-47!23;UBERON:0005562!8.93e-47!23;UBERON:0007690!8.93e-47!23;UBERON:0006562!1.21e-44!24;UBERON:0003408!1.21e-44!24;UBERON:0001557!1.21e-44!24;UBERON:0001042!1.21e-44!24;UBERON:0008814!1.21e-44!24;UBERON:0009145!1.21e-44!24;UBERON:0000072!3.36e-39!27;UBERON:0004177!3.40e-36!29;UBERON:0002390!3.02e-29!45;UBERON:0003061!3.02e-29!45;UBERON:0000063!3.07e-29!35;UBERON:0002193!4.10e-27!48;UBERON:0000065!2.57e-24!41;UBERON:0001004!1.24e-23!42;UBERON:0005057!1.10e-18!51;UBERON:0002405!4.75e-17!70;UBERON:0003929!5.24e-17!55;UBERON:0002368!3.19e-15!60;UBERON:0002530!1.03e-13!65;UBERON:0000490!1.93e-13!66;UBERON:0005911!1.15e-12!69;UBERON:0003081!1.48e-12!88;UBERON:0000949!5.90e-12!72;UBERON:0007811!2.66e-09!86;UBERON:0001041!2.05e-08!92;UBERON:0000153!3.82e-08!94;UBERON:0002384!6.90e-08!46;UBERON:0000077!9.26e-08!97;UBERON:0000064!1.62e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.97e-21,23;UBERON:0000974,1.97e-21,23;UBERON:0004807,1.97e-21,23;UBERON:0005058,1.97e-21,23;UBERON:0003351,1.97e-21,23;UBERON:0009113,1.97e-21,23;UBERON:0003295,1.97e-21,23;UBERON:0009722,1.97e-21,23;UBERON:0005562,1.97e-21,23;UBERON:0007690,1.97e-21,23;UBERON:0006562,1.59e-20,24;UBERON:0003408,1.59e-20,24;UBERON:0001557,1.59e-20,24;UBERON:0001042,1.59e-20,24;UBERON:0008814,1.59e-20,24;UBERON:0009145,1.59e-20,24;UBERON:0000072,3.36e-18,27;UBERON:0004177,6.46e-17,29;UBERON:0005057,6.46e-17,29;UBERON:0000077,6.12e-14,35;UBERON:0007811,1.54e-13,36;UBERON:0000065,7.90e-12,41;UBERON:0001004,1.55e-11,42;UBERON:0000153,2.96e-11,43;UBERON:0002390,9.89e-11,45;UBERON:0003061,9.89e-11,45;UBERON:0002193,5.01e-10,48;UBERON:0002405,5.01e-10,48;UBERON:0003929,1.11e-08,55;UBERON:0002368,6.60e-08,60;UBERON:0002530,2.98e-07,65;UBERON:0000490,3.93e-07,66;UBERON:0005911,8.54e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,3.87369970324729,1.54867594366833,0.468129052643987,0.171217968225505,0.159544317990673,2.9104124088305,0.699363219351979,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,5.07753499407941,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0.608175645870493,2.36235201479103,2.33857481360031,1.9692936523423,1.78813219303138,0.721172697119813,0.738447635872886,0.706765149637033,0.914481679859998,0.504130925684203,0.292373642219257,0.673482891482306,1.28564592399726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,3.87369970324729,1.54867594366833,0.468129052643987,0.171217968225505,0.159544317990673,2.9104124088305,0.699363219351979,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,5.07753499407941,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0.608175645870493,2.36235201479103,2.33857481360031,1.9692936523423,1.78813219303138,0.721172697119813,0.738447635872886,0.706765149637033,0.914481679859998,0.504130925684203,0.292373642219257,0.673482891482306,1.28564592399726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr7:75409731..75409742,+ | |||
}} | }} |
Latest revision as of 13:03, 5 August 2015
Short description: | p@chr7:75409731..75409742, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:75409731..75409742, + |
Coexpression cluster: | MCL_coexpression_mm9:1887 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.14e-23 | 9 |
alpha-beta T cell | 9.14e-23 | 9 |
immature T cell | 9.14e-23 | 9 |
mature T cell | 9.14e-23 | 9 |
immature alpha-beta T cell | 9.14e-23 | 9 |
T cell | 1.17e-18 | 11 |
pro-T cell | 1.17e-18 | 11 |
lymphoid lineage restricted progenitor cell | 4.10e-17 | 12 |
CD4-positive, alpha-beta T cell | 1.27e-16 | 8 |
lymphocyte | 8.32e-16 | 13 |
common lymphoid progenitor | 8.32e-16 | 13 |
leukocyte | 4.17e-12 | 17 |
nongranular leukocyte | 4.17e-12 | 17 |
CD8-positive, alpha-beta T cell | 1.19e-09 | 1 |
regulatory T cell | 1.44e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.44e-09 | 1 |
hematopoietic lineage restricted progenitor cell | 3.08e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.97e-21 | 23 |
neck | 1.97e-21 | 23 |
respiratory system epithelium | 1.97e-21 | 23 |
hemolymphoid system gland | 1.97e-21 | 23 |
pharyngeal epithelium | 1.97e-21 | 23 |
thymic region | 1.97e-21 | 23 |
pharyngeal gland | 1.97e-21 | 23 |
entire pharyngeal arch endoderm | 1.97e-21 | 23 |
thymus primordium | 1.97e-21 | 23 |
early pharyngeal endoderm | 1.97e-21 | 23 |
pharynx | 1.59e-20 | 24 |
gland of gut | 1.59e-20 | 24 |
upper respiratory tract | 1.59e-20 | 24 |
chordate pharynx | 1.59e-20 | 24 |
pharyngeal arch system | 1.59e-20 | 24 |
pharyngeal region of foregut | 1.59e-20 | 24 |
segment of respiratory tract | 3.36e-18 | 27 |
hemopoietic organ | 6.46e-17 | 29 |
immune organ | 6.46e-17 | 29 |
mixed endoderm/mesoderm-derived structure | 6.12e-14 | 35 |
craniocervical region | 1.54e-13 | 36 |
respiratory tract | 7.90e-12 | 41 |
respiratory system | 1.55e-11 | 42 |
anterior region of body | 2.96e-11 | 43 |
hematopoietic system | 9.89e-11 | 45 |
blood island | 9.89e-11 | 45 |
hemolymphoid system | 5.01e-10 | 48 |
immune system | 5.01e-10 | 48 |
gut epithelium | 1.11e-08 | 55 |
endocrine gland | 6.60e-08 | 60 |
gland | 2.98e-07 | 65 |
unilaminar epithelium | 3.93e-07 | 66 |
endo-epithelium | 8.54e-07 | 69 |