Personal tools

FFCP PHASE1:Mm9::chr18:15562125..15562144,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=11829|HGNC=|MCL_coexpression_id=972|UniProt=P55088,E9Q1W2|association_with_transcript=48bp_to_ENSMUST00000079081,ENSMUST00000168758,NM_009700,uc008eds.2_5end|description=CAGE_peak_3_at_Aqp4_5end|id=chr18:15562125..15562144,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.99e-11!52;UBERON:0005068!7.99e-11!52;UBERON:0006241!7.99e-11!52;UBERON:0007135!7.99e-11!52;UBERON:0000955!5.07e-09!50;UBERON:0006238!5.07e-09!50;UBERON:0000025!1.40e-08!114;UBERON:0002616!1.74e-08!49;UBERON:0003103!3.18e-08!43;UBERON:0003076!6.02e-08!12;UBERON:0003057!6.02e-08!12;UBERON:0004111!9.27e-08!122;UBERON:0001017!1.09e-07!73;UBERON:0005743!1.09e-07!73;UBERON:0000033!4.07e-07!63;UBERON:0000073!5.67e-07!75;UBERON:0001016!5.67e-07!75;UBERON:0002020!9.84e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.59e-14,92;UBERON:0000073,2.98e-14,54;UBERON:0001049,4.00e-14,52;UBERON:0005068,4.00e-14,52;UBERON:0006241,4.00e-14,52;UBERON:0007135,4.00e-14,52;UBERON:0001017,4.47e-13,73;UBERON:0001016,2.37e-12,75;UBERON:0000955,1.97e-11,47;UBERON:0006238,1.97e-11,47;UBERON:0002346,8.99e-11,64;UBERON:0003075,8.99e-11,64;UBERON:0007284,8.99e-11,64;UBERON:0002616,1.12e-10,46;UBERON:0002020,6.44e-10,34;UBERON:0004121,8.76e-10,95;UBERON:0000924,8.76e-10,95;UBERON:0006601,8.76e-10,95;UBERON:0003103,2.36e-09,43;UBERON:0010371,3.40e-09,73;UBERON:0000025,5.75e-09,114;UBERON:0004111,8.11e-09,122;UBERON:0003076,8.32e-09,12;UBERON:0003057,8.32e-09,12;UBERON:0002021,4.21e-08,10;UBERON:0000411,4.21e-08,10;UBERON:0001950,4.21e-08,10;UBERON:0003080,1.26e-07,40;UBERON:0003528,2.05e-07,29;UBERON:0002791,2.05e-07,29;UBERON:0001893,2.05e-07,29;UBERON:0002780,5.87e-07,39;UBERON:0001890,5.87e-07,39;UBERON:0006240,5.87e-07,39;UBERON:0002619,6.49e-07,17|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0.16787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,1.27993938234725,0.68822784320151,0,0.86152399231815,1.29282739611533,0.950117097281869,0.252030129759931,1.55211357458713,0,0,0,4.04392267651784,2.1610503896604,2.24586291888606,0,0,0,0,0,0,0,0,0,0.782391344348039,4.36050312760893,0.878744730937887,7.77719596297134,5.03951117851305,14.3752564364972,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,3.55717918444456,0.449949858640699,0,0,4.79360176829448,11.1423308543251,0.103689612308478,0,0,12.8542942981712,9.05561017901615,0,0,0,0,8.42736431362239,8.44835932909339,0,0,0,7.53794097303729,3.93933827022176,9.47349136216223,11.1958862479994,16.5151149726959,0.559198337475902,0,0,0,0.860423876981386,0,0.539703191637817,0,0,4.35377702408431,0,0,0,1.26759077799012,0,0,0,4.97929394325792,4.30711771307668,5.05524445014783,1.1418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0.884610551949874,6.47067399789637,11.7046004784009,6.30337829075789,3.72783522436244,14.6390398505774,10.6817820474862,0.766371165625774,0,0,0,14.0803201040533,7.77751024791665,1.7591609295801,5.9100268865374,5.37002460393694,12.6750707181332,9.5722345209977,0,1.49288364732112,0,1.47309299120532,0,0,0,0,0.136072998302656,0.384341160854549,0.0937017245597288,3.3631438196072,0,0,0,0,0,0,0,0,0,0,0,1.65700618028402,1.17263029990548,1.80062061461015,2.3674473558521,2.55793501271625,1.69693824176116,3.25547522650571,3.75582761959467,3.97002164048376,1.48103864922132,3.94001913789829,2.99954595319666,3.36259971078264,2.63460138349261,2.95254121272818,10.7247873767705,2.16099685996497,0,2.90895623329899,0,0,0,0.201683524623343,0.22237804384487,0.570676878337677,0.949058123089023,0.329397909448022,0.251335208800269,0.994782360205754,1.16978452271472,0.898819408654221,3.8904848977445,1.99141273254367,0.379335801906163,0.456994050438915,0,0.814605311381257,0.775809948670503,0.98190147846446,2.02356918797623,2.21415221969403,1.41298855057237,3.57851775373222,0,0,0,0,0,0,0.50925170356284,0.287696137450811,0.162135226775035,0.549122826376163,0,1.48856379067401,0.936113019343682,1.26289438973556,2.33216637578486,0,0.184753190166605,0.757965647081939,0.651859905768103,0.339490171550376,0.469380496577004,0.670025029767263,1.19021820443007,0.195133647857799,0.157635144106191,0,0.797273843287435,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0,0,17.9816660786327,16.9956945558695,0,13.6334300690361,0,0,0,0,0,0,0,0,0,12.8528526568723,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0.242780636154981,1.81394134178851,0.565815239267694,0,0.307435147943927,0,0.363533729477506,1.06949213515416,0,0,0,1.02131881726136,0.36012218806262,0.646793418913773,1.92903331528433,0.177340233642274,0.356737635204141,0,0,0,0,0,1.81374878235628,0.161464426695906,0.72375509913787,0,0.492422699235184,0.874442509889552,25.0324157714188,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.203319467126849,0,0.418176592028937,0.218362563746178,0.404593039154462,0.661227645802687,3.66458318777641,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,1.15212002503146,0.316011120628178,0,0,0,0.179026695667481,0.39736270956253,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0,0,0.467507608726276,2.72076460338254,0,0,0,0,0,0,1.07184189539533,0,6.7770221114048,4.14292712856459,5.72895513439397,3.78077001156113,6.16574267793578,3.7769694869485,8.77529250301348,1.80128481289688,4.98456649882625,2.07104124700728,0,0.399024873401031,0,0,0,0.183843508450014,0.666740183404846,1.23621034343337,0.320919209591815,0.758091635291392,1.01391719956096,0.754505365544305,0.280924522409647,0.89635213366817,0.861532034334199,1.42888107384922,0.811190281613988,0.38581844092741,0.824171801606613,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.752875043322645,0.676916863133412,2.0122077016005,0.526139422875686,0.679020569229309,1.12228454331548,1.06771516311757,0.591026894253381,0.409231043169689,0.309873682371932,0.771626443924566,0.749431733813838,2.10538447600868,2.14871054048298,2.29545998482612,7.72069966918304,10.8977882741598|short_description=p3@Aqp4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11829
|HGNC=
|MCL_coexpression_id=972
|TSSclassifier=NA
|UniProt=uniprot:P55088,uniprot:E9Q1W2
|association_with_transcript=48bp_to_ENSMUST00000079081,ENSMUST00000168758,NM_009700,uc008eds.2_5end
|cluster_id=chr18:15562125..15562144,-
|description=CAGE_peak_3_at_Aqp4_5end
|id=chr18:15562125..15562144,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!7.99e-11!52;UBERON:0005068!7.99e-11!52;UBERON:0006241!7.99e-11!52;UBERON:0007135!7.99e-11!52;UBERON:0000955!5.07e-09!50;UBERON:0006238!5.07e-09!50;UBERON:0000025!1.40e-08!114;UBERON:0002616!1.74e-08!49;UBERON:0003103!3.18e-08!43;UBERON:0003076!6.02e-08!12;UBERON:0003057!6.02e-08!12;UBERON:0004111!9.27e-08!122;UBERON:0001017!1.09e-07!73;UBERON:0005743!1.09e-07!73;UBERON:0000033!4.07e-07!63;UBERON:0000073!5.67e-07!75;UBERON:0001016!5.67e-07!75;UBERON:0002020!9.84e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.59e-14,92;UBERON:0000073,2.98e-14,54;UBERON:0001049,4.00e-14,52;UBERON:0005068,4.00e-14,52;UBERON:0006241,4.00e-14,52;UBERON:0007135,4.00e-14,52;UBERON:0001017,4.47e-13,73;UBERON:0001016,2.37e-12,75;UBERON:0000955,1.97e-11,47;UBERON:0006238,1.97e-11,47;UBERON:0002346,8.99e-11,64;UBERON:0003075,8.99e-11,64;UBERON:0007284,8.99e-11,64;UBERON:0002616,1.12e-10,46;UBERON:0002020,6.44e-10,34;UBERON:0004121,8.76e-10,95;UBERON:0000924,8.76e-10,95;UBERON:0006601,8.76e-10,95;UBERON:0003103,2.36e-09,43;UBERON:0010371,3.40e-09,73;UBERON:0000025,5.75e-09,114;UBERON:0004111,8.11e-09,122;UBERON:0003076,8.32e-09,12;UBERON:0003057,8.32e-09,12;UBERON:0002021,4.21e-08,10;UBERON:0000411,4.21e-08,10;UBERON:0001950,4.21e-08,10;UBERON:0003080,1.26e-07,40;UBERON:0003528,2.05e-07,29;UBERON:0002791,2.05e-07,29;UBERON:0001893,2.05e-07,29;UBERON:0002780,5.87e-07,39;UBERON:0001890,5.87e-07,39;UBERON:0006240,5.87e-07,39;UBERON:0002619,6.49e-07,17
|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0.16787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,1.27993938234725,0.68822784320151,0,0.86152399231815,1.29282739611533,0.950117097281869,0.252030129759931,1.55211357458713,0,0,0,4.04392267651784,2.1610503896604,2.24586291888606,0,0,0,0,0,0,0,0,0,0.782391344348039,4.36050312760893,0.878744730937887,7.77719596297134,5.03951117851305,14.3752564364972,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,3.55717918444456,0.449949858640699,0,0,4.79360176829448,11.1423308543251,0.103689612308478,0,0,12.8542942981712,9.05561017901615,0,0,0,0,8.42736431362239,8.44835932909339,0,0,0,7.53794097303729,3.93933827022176,9.47349136216223,11.1958862479994,16.5151149726959,0.559198337475902,0,0,0,0.860423876981386,0,0.539703191637817,0,0,4.35377702408431,0,0,0,1.26759077799012,0,0,0,4.97929394325792,4.30711771307668,5.05524445014783,1.1418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0.884610551949874,6.47067399789637,11.7046004784009,6.30337829075789,3.72783522436244,14.6390398505774,10.6817820474862,0.766371165625774,0,0,0,14.0803201040533,7.77751024791665,1.7591609295801,5.9100268865374,5.37002460393694,12.6750707181332,9.5722345209977,0,1.49288364732112,0,1.47309299120532,0,0,0,0,0.136072998302656,0.384341160854549,0.0937017245597288,3.3631438196072,0,0,0,0,0,0,0,0,0,0,0,1.65700618028402,1.17263029990548,1.80062061461015,2.3674473558521,2.55793501271625,1.69693824176116,3.25547522650571,3.75582761959467,3.97002164048376,1.48103864922132,3.94001913789829,2.99954595319666,3.36259971078264,2.63460138349261,2.95254121272818,10.7247873767705,2.16099685996497,0,2.90895623329899,0,0,0,0.201683524623343,0.22237804384487,0.570676878337677,0.949058123089023,0.329397909448022,0.251335208800269,0.994782360205754,1.16978452271472,0.898819408654221,3.8904848977445,1.99141273254367,0.379335801906163,0.456994050438915,0,0.814605311381257,0.775809948670503,0.98190147846446,2.02356918797623,2.21415221969403,1.41298855057237,3.57851775373222,0,0,0,0,0,0,0.50925170356284,0.287696137450811,0.162135226775035,0.549122826376163,0,1.48856379067401,0.936113019343682,1.26289438973556,2.33216637578486,0,0.184753190166605,0.757965647081939,0.651859905768103,0.339490171550376,0.469380496577004,0.670025029767263,1.19021820443007,0.195133647857799,0.157635144106191,0,0.797273843287435,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0,0,17.9816660786327,16.9956945558695,0,13.6334300690361,0,0,0,0,0,0,0,0,0,12.8528526568723,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0.242780636154981,1.81394134178851,0.565815239267694,0,0.307435147943927,0,0.363533729477506,1.06949213515416,0,0,0,1.02131881726136,0.36012218806262,0.646793418913773,1.92903331528433,0.177340233642274,0.356737635204141,0,0,0,0,0,1.81374878235628,0.161464426695906,0.72375509913787,0,0.492422699235184,0.874442509889552,25.0324157714188,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.203319467126849,0,0.418176592028937,0.218362563746178,0.404593039154462,0.661227645802687,3.66458318777641,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,1.15212002503146,0.316011120628178,0,0,0,0.179026695667481,0.39736270956253,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0,0,0.467507608726276,2.72076460338254,0,0,0,0,0,0,1.07184189539533,0,6.7770221114048,4.14292712856459,5.72895513439397,3.78077001156113,6.16574267793578,3.7769694869485,8.77529250301348,1.80128481289688,4.98456649882625,2.07104124700728,0,0.399024873401031,0,0,0,0.183843508450014,0.666740183404846,1.23621034343337,0.320919209591815,0.758091635291392,1.01391719956096,0.754505365544305,0.280924522409647,0.89635213366817,0.861532034334199,1.42888107384922,0.811190281613988,0.38581844092741,0.824171801606613,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.752875043322645,0.676916863133412,2.0122077016005,0.526139422875686,0.679020569229309,1.12228454331548,1.06771516311757,0.591026894253381,0.409231043169689,0.309873682371932,0.771626443924566,0.749431733813838,2.10538447600868,2.14871054048298,2.29545998482612,7.72069966918304,10.8977882741598
|short_description=p3@Aqp4
}}

Revision as of 13:27, 5 August 2015

Short description:p3@Aqp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Aqp4_5end
Coexpression cluster:MCL_coexpression_mm9:972
Association with transcript: 48bp_to_ENSMUST00000079081, ENSMUST00000168758, NM_009700, uc008eds.2_5end
EntrezGene:11829
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Aqp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E811.14
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F56.47
bone (os femoris), neonate N16.CNhs11225.1525-43A611.70
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B214.64
cerebellum, neonate N30.CNhs11135.1395-42I210.68
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A414.08
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F212.68
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G13.94
heart, neonate N16.CNhs11209.782-15G13.00
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E810.72
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C217.98
medulla oblongata, neonate N30.CNhs11200.1396-42A317.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.63
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C925.03
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D17.72
whole body, neonate N10.CNhs10518.761-6B410.90





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.59e-1492
regional part of nervous system2.98e-1454
neural tube4.00e-1452
neural rod4.00e-1452
future spinal cord4.00e-1452
neural keel4.00e-1452
central nervous system4.47e-1373
nervous system2.37e-1275
brain1.97e-1147
future brain1.97e-1147
neurectoderm8.99e-1164
neural plate8.99e-1164
presumptive neural plate8.99e-1164
regional part of brain1.12e-1046
gray matter6.44e-1034
ectoderm-derived structure8.76e-1095
ectoderm8.76e-1095
presumptive ectoderm8.76e-1095
compound organ2.36e-0943
ecto-epithelium3.40e-0973
tube5.75e-09114
anatomical conduit8.11e-09122
posterior neural tube8.32e-0912
chordal neural plate8.32e-0912
occipital lobe4.21e-0810
visual cortex4.21e-0810
neocortex4.21e-0810
anterior neural tube1.26e-0740
brain grey matter2.05e-0729
regional part of telencephalon2.05e-0729
telencephalon2.05e-0729
regional part of forebrain5.87e-0739
forebrain5.87e-0739
future forebrain5.87e-0739
regional part of cerebral cortex6.49e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:15562125..15562144,-&oldid=3904287"