FFCP PHASE1:Mm9::chr18:43485459..43485471,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1716 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:43485459..43485471,- | |||
|description=CAGE_peak_at_chr18:43485459..43485471,- | |description=CAGE_peak_at_chr18:43485459..43485471,- | ||
|id=chr18:43485459..43485471,- | |id=chr18:43485459..43485471,- | ||
|ontology_enrichment_celltype=CL:0000540!1.52e-14!33;CL:0000047!1.52e-14!33;CL:0000031!1.52e-14!33;CL:0000404!1.52e-14!33;CL:0000393!7.23e-13!39;CL:0000211!7.23e-13!39;CL:0002319!3.01e-12!43;CL:0000221!1.30e-11!44;CL:0000133!1.30e-11!44;CL:0000055!1.16e-10!50;CL:0000117!3.72e-10!23;CL:0000337!3.72e-10!23 | |ontology_enrichment_celltype=CL:0000540!1.52e-14!33;CL:0000047!1.52e-14!33;CL:0000031!1.52e-14!33;CL:0000404!1.52e-14!33;CL:0000393!7.23e-13!39;CL:0000211!7.23e-13!39;CL:0002319!3.01e-12!43;CL:0000221!1.30e-11!44;CL:0000133!1.30e-11!44;CL:0000055!1.16e-10!50;CL:0000117!3.72e-10!23;CL:0000337!3.72e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.60e-30,33;CL:0000047,3.60e-30,33;CL:0000031,3.60e-30,33;CL:0000404,3.60e-30,33;CL:0000393,9.45e-25,39;CL:0000211,9.45e-25,39;CL:0002319,5.59e-22,43;CL:0000221,2.30e-21,44;CL:0000133,2.30e-21,44;CL:0000117,9.20e-20,23;CL:0000337,9.20e-20,23;CL:0002609,5.60e-15,6;CL:0000107,1.35e-12,9;CL:0002321,1.41e-11,70;CL:0002613,6.11e-09,3;CL:0000120,7.74e-09,3;CL:0002608,1.56e-08,3;CL:0000723,8.63e-08,91;CL:0000048,8.63e-08,91;CL:0000034,5.12e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.57e-08!102;UBERON:0000924!1.57e-08!102;UBERON:0006601!1.57e-08!102;UBERON:0000073!1.62e-08!75;UBERON:0001016!1.62e-08!75;UBERON:0001017!2.24e-08!73;UBERON:0005743!2.24e-08!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.08e-16,73;UBERON:0001016,4.30e-16,75;UBERON:0002020,4.89e-14,34;UBERON:0004121,1.31e-12,95;UBERON:0000924,1.31e-12,95;UBERON:0006601,1.31e-12,95;UBERON:0002410,1.35e-12,9;UBERON:0003528,2.01e-12,29;UBERON:0002791,2.01e-12,29;UBERON:0001893,2.01e-12,29;UBERON:0000010,4.04e-10,11;UBERON:0000369,4.28e-09,5;UBERON:0002435,4.28e-09,5;UBERON:0000204,4.28e-09,5;UBERON:0010082,4.28e-09,5;UBERON:0002346,6.59e-09,64;UBERON:0003075,6.59e-09,64;UBERON:0007284,6.59e-09,64;UBERON:0000013,1.31e-08,3;UBERON:0002780,1.69e-08,39;UBERON:0001890,1.69e-08,39;UBERON:0006240,1.69e-08,39;UBERON:0000956,3.19e-08,21;UBERON:0001869,3.19e-08,21;UBERON:0000203,3.19e-08,21;UBERON:0003080,3.24e-08,40;UBERON:0001049,5.46e-08,52;UBERON:0005068,5.46e-08,52;UBERON:0006241,5.46e-08,52;UBERON:0007135,5.46e-08,52;UBERON:0000073,1.43e-07,54;UBERON:0010371,2.59e-07,73;UBERON:0003056,3.10e-07,49;UBERON:0002616,8.79e-07,46 | |||
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| ||
|short_description=p@chr18:43485459..43485471,- | |short_description=p@chr18:43485459..43485471,- | ||
}} | }} |
Latest revision as of 19:27, 5 August 2015
Short description: | p@chr18:43485459..43485471, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:43485459..43485471, - |
Coexpression cluster: | MCL_coexpression_mm9:1716 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.60e-30 | 33 |
neuronal stem cell | 3.60e-30 | 33 |
neuroblast | 3.60e-30 | 33 |
electrically signaling cell | 3.60e-30 | 33 |
electrically responsive cell | 9.45e-25 | 39 |
electrically active cell | 9.45e-25 | 39 |
neural cell | 5.59e-22 | 43 |
ectodermal cell | 2.30e-21 | 44 |
neurectodermal cell | 2.30e-21 | 44 |
CNS neuron (sensu Vertebrata) | 9.20e-20 | 23 |
neuroblast (sensu Vertebrata) | 9.20e-20 | 23 |
neuron of cerebral cortex | 5.60e-15 | 6 |
autonomic neuron | 1.35e-12 | 9 |
embryonic cell | 1.41e-11 | 70 |
striatum neuron | 6.11e-09 | 3 |
granule cell | 7.74e-09 | 3 |
hippocampal neuron | 1.56e-08 | 3 |
somatic stem cell | 8.63e-08 | 91 |
multi fate stem cell | 8.63e-08 | 91 |
stem cell | 5.12e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.08e-16 | 73 |
nervous system | 4.30e-16 | 75 |
gray matter | 4.89e-14 | 34 |
ectoderm-derived structure | 1.31e-12 | 95 |
ectoderm | 1.31e-12 | 95 |
presumptive ectoderm | 1.31e-12 | 95 |
autonomic nervous system | 1.35e-12 | 9 |
brain grey matter | 2.01e-12 | 29 |
regional part of telencephalon | 2.01e-12 | 29 |
telencephalon | 2.01e-12 | 29 |
peripheral nervous system | 4.04e-10 | 11 |
corpus striatum | 4.28e-09 | 5 |
striatum | 4.28e-09 | 5 |
ventral part of telencephalon | 4.28e-09 | 5 |
future corpus striatum | 4.28e-09 | 5 |
neurectoderm | 6.59e-09 | 64 |
neural plate | 6.59e-09 | 64 |
presumptive neural plate | 6.59e-09 | 64 |
sympathetic nervous system | 1.31e-08 | 3 |
regional part of forebrain | 1.69e-08 | 39 |
forebrain | 1.69e-08 | 39 |
future forebrain | 1.69e-08 | 39 |
cerebral cortex | 3.19e-08 | 21 |
cerebral hemisphere | 3.19e-08 | 21 |
pallium | 3.19e-08 | 21 |
anterior neural tube | 3.24e-08 | 40 |
neural tube | 5.46e-08 | 52 |
neural rod | 5.46e-08 | 52 |
future spinal cord | 5.46e-08 | 52 |
neural keel | 5.46e-08 | 52 |
regional part of nervous system | 1.43e-07 | 54 |
ecto-epithelium | 2.59e-07 | 73 |
pre-chordal neural plate | 3.10e-07 | 49 |
regional part of brain | 8.79e-07 | 46 |