FFCP PHASE1:Mm9::chr15:91881584..91881601,+: Difference between revisions
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{{FFCP|EntrezGene=12805|HGNC=|MCL_coexpression_id=1|UniProt=P12960|association_with_transcript=0bp_to_ENSMUST00000141187,ENSMUST00000169825,NM_001159648,uc007xii.1,uc007xim.2_5end|description=CAGE_peak_2_at_Cntn1_5end|id=chr15:91881584..91881601,+|ontology_enrichment_celltype=CL:0000221!5.15e-15!44;CL:0000133!5.15e-15!44;CL:0002319!1.78e-14!43;CL:0000540!6.81e-13!33;CL:0000047!6.81e-13!33;CL:0000031!6.81e-13!33;CL:0000404!6.81e-13!33;CL:0000117!8.28e-11!23;CL:0000337!8.28e-11!23;CL:0000055!4.83e-10!50;CL:0000393!7.72e-09!39;CL:0000211!7.72e-09!39|ontology_enrichment_celltype_v019_2=CL:0000221,6.87e-13,44;CL:0000133,6.87e-13,44;CL:0002319,2.90e-12,43;CL:0000117,3.80e-12,23;CL:0000337,3.80e-12,23;CL:0000540,4.94e-12,33;CL:0000047,4.94e-12,33;CL:0000031,4.94e-12,33;CL:0000404,4.94e-12,33;CL:0000393,9.23e-09,39;CL:0000211,9.23e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.22e-36!73;UBERON:0005743!2.22e-36!73;UBERON:0000073!4.95e-36!75;UBERON:0001016!4.95e-36!75;UBERON:0004121!5.06e-34!102;UBERON:0000924!5.06e-34!102;UBERON:0006601!5.06e-34!102;UBERON:0002346!1.57e-31!71;UBERON:0003075!1.57e-31!71;UBERON:0007284!1.57e-31!71;UBERON:0000033!6.55e-30!63;UBERON:0001049!2.05e-28!52;UBERON:0005068!2.05e-28!52;UBERON:0006241!2.05e-28!52;UBERON:0007135!2.05e-28!52;UBERON:0000955!1.30e-27!50;UBERON:0006238!1.30e-27!50;UBERON:0002616!5.95e-27!49;UBERON:0003056!3.33e-24!49;UBERON:0003080!4.24e-21!40;UBERON:0002780!2.64e-20!39;UBERON:0001890!2.64e-20!39;UBERON:0006240!2.64e-20!39;UBERON:0002020!1.08e-17!34;UBERON:0007811!2.62e-15!86;UBERON:0002791!7.16e-15!29;UBERON:0003528!7.16e-15!29;UBERON:0001893!7.16e-15!29;UBERON:0000153!3.63e-13!94;UBERON:0000956!1.12e-10!21;UBERON:0001869!1.12e-10!21;UBERON:0000203!1.12e-10!21;UBERON:0002619!8.88e-10!17;UBERON:0003076!9.69e-08!12;UBERON:0003057!9.69e-08!12;UBERON:0002021!1.38e-07!10;UBERON:0000411!1.38e-07!10;UBERON:0001950!1.38e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.45e-39,73;UBERON:0001016,1.85e-38,75;UBERON:0002346,3.31e-37,64;UBERON:0003075,3.31e-37,64;UBERON:0007284,3.31e-37,64;UBERON:0000073,2.19e-36,54;UBERON:0004121,2.46e-35,95;UBERON:0000924,2.46e-35,95;UBERON:0006601,2.46e-35,95;UBERON:0001049,3.47e-34,52;UBERON:0005068,3.47e-34,52;UBERON:0006241,3.47e-34,52;UBERON:0007135,3.47e-34,52;UBERON:0010371,1.07e-32,73;UBERON:0000955,5.95e-30,47;UBERON:0006238,5.95e-30,47;UBERON:0002616,4.16e-29,46;UBERON:0003056,4.75e-28,49;UBERON:0003080,1.55e-25,40;UBERON:0002780,1.67e-24,39;UBERON:0001890,1.67e-24,39;UBERON:0006240,1.67e-24,39;UBERON:0010314,6.65e-22,92;UBERON:0002020,4.53e-21,34;UBERON:0003528,2.20e-17,29;UBERON:0002791,2.20e-17,29;UBERON:0001893,2.20e-17,29;UBERON:0000956,6.44e-12,21;UBERON:0001869,6.44e-12,21;UBERON:0000203,6.44e-12,21;UBERON:0002619,1.50e-11,17;UBERON:0002021,1.55e-09,10;UBERON:0000411,1.55e-09,10;UBERON:0001950,1.55e-09,10;UBERON:0003076,8.09e-09,12;UBERON:0003057,8.09e-09,12;UBERON:0001894,5.32e-08,10;UBERON:0006222,5.32e-08,10;UBERON:0002420,9.34e-07,8;UBERON:0007245,9.34e-07,8;UBERON:0010009,9.34e-07,8;UBERON:0010011,9.34e-07,8;UBERON:0000454,9.34e-07,8|phase1_expression=3.68342348341026,0,0,0,0,0,0,0.774739940649458,0,0,0,0,0,0,0,0,0,0,0,0,10.4603246885816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,2.39827672018491,2.63623419281366,7.19390626574849,0.55994568650145,2.87505128729943,0,0,0,0,0,0,2.02316460859598,2.64495489636016,3.1691570175309,0,0,0,0,0,3.29560121570245,0.768436610643109,0.829516898467821,1.62007125998029,1.68259969081106,18.5673139862472,19.2155630627904,1.46988959057945,0.766763768145891,3.67687514644008,61.6648933596577,64.7374804091902,70.8126118311282,2.37395317914349,2.74462930807229,3.12548022334056,44.3900968412196,48.9603470727562,43.0891058730605,25.0434297652618,19.7896636310753,8.38797506213853,0.227178579999552,1.058001841495,0,0,0,0,0,0,1.96622188184453,0,0,0,12.1125341007945,0,0,0,0,0,0,1.48439043634778,0.517875767294343,0.742210695324124,0.346970653532272,0.608930956624282,0.230615497256059,0.452167921657868,1.52865319276416,0.628332956648377,0,0.289198713839823,0,0,0,0,1.86391761218122,79.0508151931177,69.7457533688805,1.27728527604296,0,0,0,71.3003443566956,39.8025524452205,8.41884159156192,44.1513773288382,36.5673103982373,53.6093154963665,52.7284104970212,0.81471491080253,0,0,3.36706969418358,0.650602214813519,0.689706313300419,2.34080768746954,2.86339153887859,4.35433594568498,7.68682321709099,6.74652416830048,12.4177617954728,0,0.189106080167819,0.351902248327898,0,0,1.0447564995665,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,43.1094394556461,9.57012895127345,0,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,1.4117846723634,0,0.951128130562796,0.949058123089023,0.329397909448022,0.502670417600539,0.795825888164603,1.75467678407208,1.79763881730844,0.864552199498777,1.1948476395262,0.379335801906163,0.114248512609729,1.1270773567308,0,0.387904974335251,0.420814919341911,0.316182685621286,0.738050739898011,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,1.47802552133284,0,0,0,0,0.837531287209079,0.476087281772027,0,0.945810864637146,0.44292937929755,1.2756381492599,0.327726629431476,0.863424909329478,0.433947175744535,0,0,0,0,61.1697747853487,63.6459458195663,0,0,0.631016438832513,1.95219372148319,4.09304455692318,0.955875191810208,0.891194696329576,0.849229592366497,1.61924280669958,3.50707029493574,3.16230222357219,26.66966926301,0.425820255624806,0.712262414669021,0.162886959353576,0.824850614862677,0,0,0,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,1.09060118843252,0.356497378384721,0.948110273807448,0,0,25.8734100372879,3.42116078659489,2.06973894052407,6.21577401591618,10.995094485821,10.7021290561242,10.2020392773315,7.61162372786498,0,0,1.32317038832977,0.8244312647074,0,0.241251699712623,0.358117032009409,0.492422699235184,0,56.1838665091844,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.406638934253697,1.29606408986162,0.836353184057875,0.655087691238533,0.539457385539283,0.743881101528023,0.26175594198403,0.90730481304255,0,0,0.299033092087958,0,0.388902376688095,0.258319646955462,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0,0,0.579568782096571,3.37828455812128,2.01466786693992,0.428736758158132,0,34.4498623996411,37.2863441570813,38.3839994004396,30.9335728218638,41.1049511862385,53.6329667146687,33.0761025113585,46.3830839320947,42.5953864445152,40.385304316642,0,0,0.170733605754134,0.486213434136588,1.25767897576789,0.735374033800057,1.55572709461131,1.64828045791115,1.92551525755089,1.51618327058278,2.5347929989024,1.32038438970253,1.21733959710847,1.6646539625266,1.26358031702349,1.42888107384922,1.62238056322798,1.15745532278223,2.47251540481984,1.32479028120958,1.71434626192708,1.4198064492747,2.62279808942053,1.88950341622027,1.88218760830661,1.77690676572521,1.46342378298218,1.8414879800649,1.90125759384206,3.36685362994643,2.25406534435931,2.1670986122624,1.22769312950907,1.39443157067369,1.15743966588685,2.24829520144151,0.467863216890817,1.50409737833809,1.72159498861959,1.10295709559758,1.39120701372253|short_description=p2@Cntn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12805 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P12960 | |||
|association_with_transcript=0bp_to_ENSMUST00000141187,ENSMUST00000169825,NM_001159648,uc007xii.1,uc007xim.2_5end | |||
|cluster_id=chr15:91881584..91881601,+ | |||
|description=CAGE_peak_2_at_Cntn1_5end | |||
|id=chr15:91881584..91881601,+ | |||
|ontology_enrichment_celltype=CL:0000221!5.15e-15!44;CL:0000133!5.15e-15!44;CL:0002319!1.78e-14!43;CL:0000540!6.81e-13!33;CL:0000047!6.81e-13!33;CL:0000031!6.81e-13!33;CL:0000404!6.81e-13!33;CL:0000117!8.28e-11!23;CL:0000337!8.28e-11!23;CL:0000055!4.83e-10!50;CL:0000393!7.72e-09!39;CL:0000211!7.72e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.87e-13,44;CL:0000133,6.87e-13,44;CL:0002319,2.90e-12,43;CL:0000117,3.80e-12,23;CL:0000337,3.80e-12,23;CL:0000540,4.94e-12,33;CL:0000047,4.94e-12,33;CL:0000031,4.94e-12,33;CL:0000404,4.94e-12,33;CL:0000393,9.23e-09,39;CL:0000211,9.23e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.22e-36!73;UBERON:0005743!2.22e-36!73;UBERON:0000073!4.95e-36!75;UBERON:0001016!4.95e-36!75;UBERON:0004121!5.06e-34!102;UBERON:0000924!5.06e-34!102;UBERON:0006601!5.06e-34!102;UBERON:0002346!1.57e-31!71;UBERON:0003075!1.57e-31!71;UBERON:0007284!1.57e-31!71;UBERON:0000033!6.55e-30!63;UBERON:0001049!2.05e-28!52;UBERON:0005068!2.05e-28!52;UBERON:0006241!2.05e-28!52;UBERON:0007135!2.05e-28!52;UBERON:0000955!1.30e-27!50;UBERON:0006238!1.30e-27!50;UBERON:0002616!5.95e-27!49;UBERON:0003056!3.33e-24!49;UBERON:0003080!4.24e-21!40;UBERON:0002780!2.64e-20!39;UBERON:0001890!2.64e-20!39;UBERON:0006240!2.64e-20!39;UBERON:0002020!1.08e-17!34;UBERON:0007811!2.62e-15!86;UBERON:0002791!7.16e-15!29;UBERON:0003528!7.16e-15!29;UBERON:0001893!7.16e-15!29;UBERON:0000153!3.63e-13!94;UBERON:0000956!1.12e-10!21;UBERON:0001869!1.12e-10!21;UBERON:0000203!1.12e-10!21;UBERON:0002619!8.88e-10!17;UBERON:0003076!9.69e-08!12;UBERON:0003057!9.69e-08!12;UBERON:0002021!1.38e-07!10;UBERON:0000411!1.38e-07!10;UBERON:0001950!1.38e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.45e-39,73;UBERON:0001016,1.85e-38,75;UBERON:0002346,3.31e-37,64;UBERON:0003075,3.31e-37,64;UBERON:0007284,3.31e-37,64;UBERON:0000073,2.19e-36,54;UBERON:0004121,2.46e-35,95;UBERON:0000924,2.46e-35,95;UBERON:0006601,2.46e-35,95;UBERON:0001049,3.47e-34,52;UBERON:0005068,3.47e-34,52;UBERON:0006241,3.47e-34,52;UBERON:0007135,3.47e-34,52;UBERON:0010371,1.07e-32,73;UBERON:0000955,5.95e-30,47;UBERON:0006238,5.95e-30,47;UBERON:0002616,4.16e-29,46;UBERON:0003056,4.75e-28,49;UBERON:0003080,1.55e-25,40;UBERON:0002780,1.67e-24,39;UBERON:0001890,1.67e-24,39;UBERON:0006240,1.67e-24,39;UBERON:0010314,6.65e-22,92;UBERON:0002020,4.53e-21,34;UBERON:0003528,2.20e-17,29;UBERON:0002791,2.20e-17,29;UBERON:0001893,2.20e-17,29;UBERON:0000956,6.44e-12,21;UBERON:0001869,6.44e-12,21;UBERON:0000203,6.44e-12,21;UBERON:0002619,1.50e-11,17;UBERON:0002021,1.55e-09,10;UBERON:0000411,1.55e-09,10;UBERON:0001950,1.55e-09,10;UBERON:0003076,8.09e-09,12;UBERON:0003057,8.09e-09,12;UBERON:0001894,5.32e-08,10;UBERON:0006222,5.32e-08,10;UBERON:0002420,9.34e-07,8;UBERON:0007245,9.34e-07,8;UBERON:0010009,9.34e-07,8;UBERON:0010011,9.34e-07,8;UBERON:0000454,9.34e-07,8 | |||
|phase1_expression=3.68342348341026,0,0,0,0,0,0,0.774739940649458,0,0,0,0,0,0,0,0,0,0,0,0,10.4603246885816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,2.39827672018491,2.63623419281366,7.19390626574849,0.55994568650145,2.87505128729943,0,0,0,0,0,0,2.02316460859598,2.64495489636016,3.1691570175309,0,0,0,0,0,3.29560121570245,0.768436610643109,0.829516898467821,1.62007125998029,1.68259969081106,18.5673139862472,19.2155630627904,1.46988959057945,0.766763768145891,3.67687514644008,61.6648933596577,64.7374804091902,70.8126118311282,2.37395317914349,2.74462930807229,3.12548022334056,44.3900968412196,48.9603470727562,43.0891058730605,25.0434297652618,19.7896636310753,8.38797506213853,0.227178579999552,1.058001841495,0,0,0,0,0,0,1.96622188184453,0,0,0,12.1125341007945,0,0,0,0,0,0,1.48439043634778,0.517875767294343,0.742210695324124,0.346970653532272,0.608930956624282,0.230615497256059,0.452167921657868,1.52865319276416,0.628332956648377,0,0.289198713839823,0,0,0,0,1.86391761218122,79.0508151931177,69.7457533688805,1.27728527604296,0,0,0,71.3003443566956,39.8025524452205,8.41884159156192,44.1513773288382,36.5673103982373,53.6093154963665,52.7284104970212,0.81471491080253,0,0,3.36706969418358,0.650602214813519,0.689706313300419,2.34080768746954,2.86339153887859,4.35433594568498,7.68682321709099,6.74652416830048,12.4177617954728,0,0.189106080167819,0.351902248327898,0,0,1.0447564995665,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,43.1094394556461,9.57012895127345,0,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,1.4117846723634,0,0.951128130562796,0.949058123089023,0.329397909448022,0.502670417600539,0.795825888164603,1.75467678407208,1.79763881730844,0.864552199498777,1.1948476395262,0.379335801906163,0.114248512609729,1.1270773567308,0,0.387904974335251,0.420814919341911,0.316182685621286,0.738050739898011,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,1.47802552133284,0,0,0,0,0.837531287209079,0.476087281772027,0,0.945810864637146,0.44292937929755,1.2756381492599,0.327726629431476,0.863424909329478,0.433947175744535,0,0,0,0,61.1697747853487,63.6459458195663,0,0,0.631016438832513,1.95219372148319,4.09304455692318,0.955875191810208,0.891194696329576,0.849229592366497,1.61924280669958,3.50707029493574,3.16230222357219,26.66966926301,0.425820255624806,0.712262414669021,0.162886959353576,0.824850614862677,0,0,0,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,1.09060118843252,0.356497378384721,0.948110273807448,0,0,25.8734100372879,3.42116078659489,2.06973894052407,6.21577401591618,10.995094485821,10.7021290561242,10.2020392773315,7.61162372786498,0,0,1.32317038832977,0.8244312647074,0,0.241251699712623,0.358117032009409,0.492422699235184,0,56.1838665091844,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.406638934253697,1.29606408986162,0.836353184057875,0.655087691238533,0.539457385539283,0.743881101528023,0.26175594198403,0.90730481304255,0,0,0.299033092087958,0,0.388902376688095,0.258319646955462,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0,0,0.579568782096571,3.37828455812128,2.01466786693992,0.428736758158132,0,34.4498623996411,37.2863441570813,38.3839994004396,30.9335728218638,41.1049511862385,53.6329667146687,33.0761025113585,46.3830839320947,42.5953864445152,40.385304316642,0,0,0.170733605754134,0.486213434136588,1.25767897576789,0.735374033800057,1.55572709461131,1.64828045791115,1.92551525755089,1.51618327058278,2.5347929989024,1.32038438970253,1.21733959710847,1.6646539625266,1.26358031702349,1.42888107384922,1.62238056322798,1.15745532278223,2.47251540481984,1.32479028120958,1.71434626192708,1.4198064492747,2.62279808942053,1.88950341622027,1.88218760830661,1.77690676572521,1.46342378298218,1.8414879800649,1.90125759384206,3.36685362994643,2.25406534435931,2.1670986122624,1.22769312950907,1.39443157067369,1.15743966588685,2.24829520144151,0.467863216890817,1.50409737833809,1.72159498861959,1.10295709559758,1.39120701372253 | |||
|short_description=p2@Cntn1 | |||
}} |
Revision as of 20:57, 5 August 2015
Short description: | p2@Cntn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cntn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000141187, ENSMUST00000169825, NM_001159648, uc007xii.1, uc007xim.2_5end |
EntrezGene: | 12805 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.87e-13 | 44 |
neurectodermal cell | 6.87e-13 | 44 |
neural cell | 2.90e-12 | 43 |
CNS neuron (sensu Vertebrata) | 3.80e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.80e-12 | 23 |
neuron | 4.94e-12 | 33 |
neuronal stem cell | 4.94e-12 | 33 |
neuroblast | 4.94e-12 | 33 |
electrically signaling cell | 4.94e-12 | 33 |
electrically responsive cell | 9.23e-09 | 39 |
electrically active cell | 9.23e-09 | 39 |