FFCP PHASE1:Mm9::chr11:5763981..5764006,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=600 | |MCL_coexpression_id=600 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:5763981..5764006,+ | |||
|description=CAGE_peak_at_chr11:5763981..5764006,+ | |description=CAGE_peak_at_chr11:5763981..5764006,+ | ||
|id=chr11:5763981..5764006,+ | |id=chr11:5763981..5764006,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.42e-23,6;CL:0000187,1.42e-23,6;CL:0000056,1.42e-23,6;CL:0000222,3.30e-20,7;CL:0000192,2.54e-18,3;CL:0000359,2.54e-18,3;CL:0002539,2.54e-18,3;CL:0000514,2.54e-18,3;CL:0002092,2.02e-17,3;CL:0002540,2.02e-17,3;CL:0002453,4.94e-17,8;CL:0000355,1.03e-15,9;CL:0000333,1.27e-13,10;CL:0000095,1.27e-13,10;CL:0000243,1.27e-13,10;CL:0000123,1.27e-13,10;CL:0000125,1.27e-13,10;CL:0000030,1.27e-13,10;CL:0000339,1.27e-13,10;CL:0000878,6.40e-12,2;CL:0000129,6.40e-12,2;CL:0002605,1.36e-11,2;CL:0002604,1.36e-11,2;CL:0000128,8.95e-09,6;CL:0000126,8.95e-09,6;CL:0000127,8.95e-09,6;CL:0002494,4.63e-08,3;CL:0000737,4.63e-08,3;CL:0000746,4.63e-08,3;CL:0000513,4.63e-08,3;CL:0000219,3.39e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.54e-18,3;UBERON:0004237,2.54e-18,3;UBERON:0004695,2.54e-18,3;UBERON:0002111,2.54e-18,3;UBERON:0004178,2.54e-18,3;UBERON:0002204,2.72e-16,32;UBERON:0001134,1.03e-15,9;UBERON:0002036,1.03e-15,9;UBERON:0002385,1.03e-15,9;UBERON:0000486,1.03e-15,9;UBERON:0007503,1.03e-15,9;UBERON:0001015,1.03e-15,9;UBERON:0002329,1.03e-15,9;UBERON:0003082,1.03e-15,9;UBERON:0003059,1.03e-15,9;UBERON:0007282,1.03e-15,9;UBERON:0004290,1.03e-15,9;UBERON:0009618,1.03e-15,9;UBERON:0000383,3.90e-14,10;UBERON:0000947,6.89e-14,4;UBERON:0001637,6.89e-14,4;UBERON:0004573,6.89e-14,4;UBERON:0003509,6.89e-14,4;UBERON:0004571,6.89e-14,4;UBERON:0010191,6.89e-14,4;UBERON:0004572,6.89e-14,4;UBERON:0007524,7.64e-13,11;UBERON:0003077,7.64e-13,11;UBERON:0007285,7.64e-13,11;UBERON:0000055,3.23e-11,5;UBERON:0007500,3.23e-11,5;UBERON:0001981,3.23e-11,5;UBERON:0002049,3.23e-11,5;UBERON:0007798,3.23e-11,5;UBERON:0004537,3.23e-11,5;UBERON:0006965,3.23e-11,5;UBERON:0002371,1.30e-08,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4422613481683,9.52943153463437,6.79122982998222,3.12956537739216,0,1.09843091367236,1.36100929351998,0.979904951377538,0,0,0,0,1.02903774414379,2.57880095944881,0.515672092277442,0,0,0,2.37191172448392,0.889294796111139,1.3498495759221,6.92206453796882,2.8419204597844,2.99600110518405,1.15265491596466,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0,0.908714319998209,0.982430281388212,0.289864488701678,0,0,0,0,0,0.280888840263504,0.681721290312231,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.890652834388949,0.520455980298408,0.608930956624282,0.461230994512117,0.301445281105245,0.940709657085638,0.251333182659351,0,0.86759614151947,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.611036183101898,0.248813941220186,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.204109497453984,0.512454881139399,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0.257734922644187,0.403367049246685,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0.228497025219458,0,0,0.193952487167626,0.280543279561274,0.126473074248515,0.295220295959204,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,2.87536413054709,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0,0,0.327869890753351,0,0.315508219416257,0,0,0,0.445597348164788,0.849229592366497,0,0,0.395287777946524,0.321321316421807,0.567760340833074,0.534196811001766,0.325773918707152,1.31976098378028,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.356737635204141,0.493647061806363,0.304464949114599,0,0.42366414172764,0.220528398054962,0.65954501176592,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0.404593039154462,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0.496375471371293,0,0,0.337912250981556,0.234714477291508,0.2604087696879,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,0.93841237725591,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0,0,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4422613481683,9.52943153463437,6.79122982998222,3.12956537739216,0,1.09843091367236,1.36100929351998,0.979904951377538,0,0,0,0,1.02903774414379,2.57880095944881,0.515672092277442,0,0,0,2.37191172448392,0.889294796111139,1.3498495759221,6.92206453796882,2.8419204597844,2.99600110518405,1.15265491596466,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0,0.908714319998209,0.982430281388212,0.289864488701678,0,0,0,0,0,0.280888840263504,0.681721290312231,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.890652834388949,0.520455980298408,0.608930956624282,0.461230994512117,0.301445281105245,0.940709657085638,0.251333182659351,0,0.86759614151947,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.611036183101898,0.248813941220186,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.204109497453984,0.512454881139399,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0.257734922644187,0.403367049246685,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0.228497025219458,0,0,0.193952487167626,0.280543279561274,0.126473074248515,0.295220295959204,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,2.87536413054709,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0,0,0.327869890753351,0,0.315508219416257,0,0,0,0.445597348164788,0.849229592366497,0,0,0.395287777946524,0.321321316421807,0.567760340833074,0.534196811001766,0.325773918707152,1.31976098378028,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.356737635204141,0.493647061806363,0.304464949114599,0,0.42366414172764,0.220528398054962,0.65954501176592,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0.404593039154462,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0.496375471371293,0,0,0.337912250981556,0.234714477291508,0.2604087696879,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,0.93841237725591,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0,0,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr11:5763981..5764006,+ | |short_description=p@chr11:5763981..5764006,+ | ||
}} | }} |
Latest revision as of 03:37, 6 August 2015
Short description: | p@chr11:5763981..5764006, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:5763981..5764006, + |
Coexpression cluster: | MCL_coexpression_mm9:600 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.42e-23 | 6 |
muscle cell | 1.42e-23 | 6 |
myoblast | 1.42e-23 | 6 |
mesodermal cell | 3.30e-20 | 7 |
smooth muscle cell | 2.54e-18 | 3 |
vascular associated smooth muscle cell | 2.54e-18 | 3 |
aortic smooth muscle cell | 2.54e-18 | 3 |
smooth muscle myoblast | 2.54e-18 | 3 |
bone marrow cell | 2.02e-17 | 3 |
mesenchymal stem cell of the bone marrow | 2.02e-17 | 3 |
oligodendrocyte precursor cell | 4.94e-17 | 8 |
multi-potent skeletal muscle stem cell | 1.03e-15 | 9 |
migratory neural crest cell | 1.27e-13 | 10 |
neuron associated cell | 1.27e-13 | 10 |
glial cell (sensu Vertebrata) | 1.27e-13 | 10 |
neuron associated cell (sensu Vertebrata) | 1.27e-13 | 10 |
glial cell | 1.27e-13 | 10 |
glioblast | 1.27e-13 | 10 |
glioblast (sensu Vertebrata) | 1.27e-13 | 10 |
central nervous system macrophage | 6.40e-12 | 2 |
microglial cell | 6.40e-12 | 2 |
astrocyte of the cerebral cortex | 1.36e-11 | 2 |
astrocyte of the hippocampus | 1.36e-11 | 2 |
oligodendrocyte | 8.95e-09 | 6 |
macroglial cell | 8.95e-09 | 6 |
astrocyte | 8.95e-09 | 6 |
cardiocyte | 4.63e-08 | 3 |
striated muscle cell | 4.63e-08 | 3 |
cardiac muscle cell | 4.63e-08 | 3 |
cardiac muscle myoblast | 4.63e-08 | 3 |
motile cell | 3.39e-07 | 54 |