FFCP PHASE1:Hg19::chr12:9067059..9067109,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:9067059..9067109,+ to FFCP PHASE1:Hg19::chr12:9067059..9067109,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1911 | |EntrezGene=1911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3182 | |HGNC=3182 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_ENST00000543824_5end | |||
|cluster_id=chr12:9067059..9067109,+ | |||
|description=CAGE_peak_2_at_PHC1_5end | |||
|id=chr12:9067059..9067109,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!7.27e-10!22;DOID:2994!7.27e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.03e-10;22!DOID:2994;1.03e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.25e-11,22;DOID:2994,2.25e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.01e-21!94;UBERON:0001016!2.01e-21!94;UBERON:0005743!1.13e-19!86;UBERON:0001017!3.20e-19!82;UBERON:0001049!1.59e-18!57;UBERON:0005068!1.59e-18!57;UBERON:0006241!1.59e-18!57;UBERON:0007135!1.59e-18!57;UBERON:0002346!2.80e-16!90;UBERON:0002616!6.74e-16!59;UBERON:0003075!3.50e-15!86;UBERON:0007284!3.50e-15!86;UBERON:0000955!7.54e-15!69;UBERON:0006238!7.54e-15!69;UBERON:0000924!1.14e-14!173;UBERON:0006601!1.14e-14!173;UBERON:0007023!2.94e-14!115;UBERON:0002780!3.45e-14!41;UBERON:0001890!3.45e-14!41;UBERON:0006240!3.45e-14!41;UBERON:0004121!1.05e-13!169;UBERON:0003080!3.57e-13!42;UBERON:0001893!1.91e-12!34;UBERON:0002020!2.32e-12!34;UBERON:0003528!2.32e-12!34;UBERON:0002791!4.57e-12!33;UBERON:0001869!4.86e-12!32;UBERON:0000153!5.74e-11!129;UBERON:0007811!5.74e-11!129;UBERON:0003056!2.32e-10!61;UBERON:0000033!3.16e-10!123;UBERON:0000956!6.04e-10!25;UBERON:0000203!6.04e-10!25;UBERON:0002619!1.66e-09!22;UBERON:0001950!1.94e-08!20;UBERON:0003135!4.89e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.93e-11;53!UBERON:0002616;1.93e-11;53!UBERON:0001893;3.04e-11;34!UBERON:0002780;4.26e-11;41!UBERON:0001890;4.26e-11;41!UBERON:0001869;6.23e-11;32!UBERON:0000956;7.59e-11;25!UBERON:0000203;7.59e-11;25!UBERON:0002791;1.05e-10;32!UBERON:0003528;1.57e-10;34!UBERON:0002020;1.57e-10;34!UBERON:0002619;2.34e-10;22!UBERON:0001950;4.70e-09;20!UBERON:0003135;8.59e-08;11!UBERON:0000955;1.91e-07;68!UBERON:0001016;2.96e-07;83!UBERON:0001017;4.83e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.85e-24,89;UBERON:0001049,7.75e-22,56;UBERON:0005068,7.75e-22,56;UBERON:0006241,7.75e-22,56;UBERON:0007135,7.75e-22,56;UBERON:0001017,1.46e-21,81;UBERON:0002346,2.18e-20,86;UBERON:0000073,2.80e-20,53;UBERON:0002616,2.80e-20,53;UBERON:0003075,4.60e-19,82;UBERON:0007284,4.60e-19,82;UBERON:0000955,1.94e-16,68;UBERON:0006238,1.94e-16,68;UBERON:0007023,1.32e-15,114;UBERON:0002780,1.71e-15,41;UBERON:0001890,1.71e-15,41;UBERON:0003080,1.71e-15,41;UBERON:0006240,1.71e-15,41;UBERON:0004121,2.04e-15,171;UBERON:0000924,2.04e-15,171;UBERON:0006601,2.04e-15,171;UBERON:0001893,7.43e-14,34;UBERON:0003528,9.31e-14,34;UBERON:0002020,9.31e-14,34;UBERON:0001869,2.27e-13,32;UBERON:0010371,2.82e-13,104;UBERON:0003056,4.89e-13,61;UBERON:0002791,6.39e-13,32;UBERON:0000956,2.16e-11,25;UBERON:0000203,2.16e-11,25;UBERON:0002619,7.17e-11,22;UBERON:0010314,1.53e-10,132;UBERON:0001950,1.30e-09,20;UBERON:0003135,4.89e-08,11;UBERON:0003076,1.26e-07,15;UBERON:0003057,1.26e-07,15;UBERON:0011216,1.52e-07,223 | |||
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| ||
|short_description=p2@PHC1 | |||
}} | }} |
Latest revision as of 20:16, 15 September 2015
Short description: | p2@PHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PHC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000543824_5end |
EntrezGene: | PHC1 |
HGNC: | 3182 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.25e-11 | 22 |
germ cell cancer | 2.25e-11 | 22 |