FFCP PHASE1:Hg19::chr14:71108790..71108812,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23508 | |EntrezGene=23508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20267 | |HGNC=20267 | ||
|TSSclassifier=strong | |||
|UniProt=Q92623 | |UniProt=Q92623 | ||
|association_with_transcript=286bp_to_ENST00000256367,NM_015351,uc001xmi.2_5end | |association_with_transcript=286bp_to_ENST00000256367,NM_015351,uc001xmi.2_5end | ||
|cluster_id=chr14:71108790..71108812,+ | |||
|description=CAGE_peak_6_at_TTC9_5end | |description=CAGE_peak_6_at_TTC9_5end | ||
|id=chr14:71108790..71108812,+ | |id=chr14:71108790..71108812,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.34e-10!52;CL:0000542!3.57e-10!53;CL:0000051!3.57e-10!53;CL:0000945!7.18e-07!24;CL:0000826!7.18e-07!24 | |ontology_enrichment_celltype=CL:0000838!1.34e-10!52;CL:0000542!3.57e-10!53;CL:0000051!3.57e-10!53;CL:0000945!7.18e-07!24;CL:0000826!7.18e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000575;1.68e-09;2!CL:0000791;5.95e-08;18!CL:0000789;5.95e-08;18!CL:0002419;5.95e-08;18!CL:0000624;6.38e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.77e-09,2;CL:0000791,6.24e-08,18;CL:0000789,6.24e-08,18;CL:0002420,6.24e-08,18;CL:0002419,6.24e-08,18;CL:0000790,6.24e-08,18;CL:0000624,9.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;5.95e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!6.67e-18!86;UBERON:0001049!1.13e-17!57;UBERON:0005068!1.13e-17!57;UBERON:0006241!1.13e-17!57;UBERON:0007135!1.13e-17!57;UBERON:0001017!2.68e-17!82;UBERON:0000073!7.08e-15!94;UBERON:0001016!7.08e-15!94;UBERON:0002780!1.82e-13!41;UBERON:0001890!1.82e-13!41;UBERON:0006240!1.82e-13!41;UBERON:0001893!2.31e-13!34;UBERON:0002020!3.69e-13!34;UBERON:0003528!3.69e-13!34;UBERON:0002616!4.00e-13!59;UBERON:0003080!7.20e-13!42;UBERON:0002791!1.17e-12!33;UBERON:0007023!1.54e-12!115;UBERON:0003075!1.64e-12!86;UBERON:0007284!1.64e-12!86;UBERON:0001869!2.04e-12!32;UBERON:0000955!6.51e-12!69;UBERON:0006238!6.51e-12!69;UBERON:0002346!1.14e-11!90;UBERON:0002619!2.54e-10!22;UBERON:0001950!2.62e-10!20;UBERON:0000956!3.29e-10!25;UBERON:0000203!3.29e-10!25;UBERON:0003056!1.20e-09!61;UBERON:0000153!1.32e-09!129;UBERON:0007811!1.32e-09!129;UBERON:0000033!2.67e-08!123;UBERON:0004121!2.02e-07!169;UBERON:0000924!4.40e-07!173;UBERON:0006601!4.40e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;6.14e-10;2!UBERON:0001723;6.51e-07;3!UBERON:0001033;6.51e-07;3!UBERON:0000988;7.43e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006562,5.05e-10,11;UBERON:0001017,1.99e-09,81;UBERON:0004121,1.08e-08,171;UBERON:0000924,1.08e-08,171;UBERON:0006601,1.08e-08,171;UBERON:0001049,3.16e-08,56;UBERON:0005068,3.16e-08,56;UBERON:0006241,3.16e-08,56;UBERON:0007135,3.16e-08,56;UBERON:0001016,3.58e-08,89;UBERON:0007023,4.30e-08,114;UBERON:0001042,2.16e-07,10;UBERON:0009145,2.16e-07,10;UBERON:0000073,2.88e-07,53;UBERON:0002616,2.88e-07,53;UBERON:0001723,4.09e-07,3;UBERON:0001033,4.09e-07,3;UBERON:0010056,4.09e-07,3;UBERON:0003075,5.76e-07,82;UBERON:0007284,5.76e-07,82;UBERON:0000988,6.36e-07,3;UBERON:0001869,6.82e-07,32;UBERON:0011216,7.46e-07,223;UBERON:0010371,7.57e-07,104 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.982935746006035,0.697801167972428,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0.572471974262113,0,0.125542639594803,0.382067028739756,0.410502947249729,0.236132343941038,0.393364276848904,0,0.464448369948228,0,0.30120591877825,0,0.309868802321207,0.284338464974843,0.293600439334847,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0.398927315243264,0.852449501065388,0.290209238628584,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0.39783335439818,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0.800791974072025,1.14950487990897,0.661044872784862,0.954053754535364,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0.526768169550154,1.180258620683,0,1.02800749499755,0.334372990781356,0,0,0,0.557052284425868,0.589211814949674,0.443067789167242,0.270803863765016,0.384273959177026,0.260118695119756,0.328875809207352,0.829050053357545,0.579606171470105,1.33457906845854,0,0,1.0197840842781,1.14966148080576,0.68725489096526,0.253019692019503,1.59282707162048,1.30216690771284,0.950452044448374,0.451725357233318,0.383959833463255,1.24930726552346,0.947109008176067,0,0.80642697289893,0,0.579297615531196,0,0,0,0.361439152384566,0.50133791063589,0,0,0.486634870302636,0,0,0,0.196468613246569,1.09288586487763,1.48313777113772,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,0.272746120590835,0.573609190778008,0,0,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0.197030760201927,0.431255149719035,0.256686072559497,0.508189248444927,1.30139853857622,0.773288812777695,0,2.55175500661265,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.620304078368662,0.215714200818617,0.426910231213777,0.606255142892519,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0.802025881213139,1.56537681191024,0,0,0,1.80479845162965,0.693138033939733,0,1.46139224653261,0.73886140225013,0,0,0,0,0.270946437543853,1.00337954770971,0.764628819135115,0,0.447749509444357,0,0,0.769350375349168,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.275673144969061,0,0.145016693914229,0.255679882248303,0.890320356467374,0.330569830721956,0,0,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0.459446800413919,0,0,0,0.714695326373367,0.822724546172388,1.29694662238543,0,0.79312517629427,0,0,0.490080431962063,0,0.144269212976445,0.0711418433484141,0.318852545457645,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,1.26602474769461,0,0,0,0.398495976502139,0,0,0,0.369254416383208,0.622079175323615,0,0.895105873378046,0,0.197286811273867,0,0,0.969332746095218,1.02044907978036,0,0.7812832832557,6.38457999972229,0,0.1137934482855,0.762760950878299,0,0,0,0.173624994933292,0,0.964771509003264,0,0.221158519862449,0.591095237907095,1.09692698576986,0,0.975966209950223,0.846452843541768,0.113942055847001,0,0.179515288819544,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,0.489698424477443,0,0,0,0,0,0,0,0,0.606610196826093,0,0.937057782901357,0.182454789215666,0.19566461893209,0,0,0,0.61214552326098,0.126373159256976,0,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0.347119476670262,0.293977192243133,0,0,0,0,0,0,12.5115831270061,0,0.677942222341597,0.137041924646751,0,0.759729551470544,0,0,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,1.49823746722733,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0.91124334987037,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0.26446520348538,0,0.704815022316672,0,0.157204305099666,0,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0.876336514945499,0.573409195690071,0.887432412294818,0.807253238237985,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,2.52369796457302,0,0.428883182749851,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,1.10606748921385,0,0,0.163565394255844,0.655219697692825,0.245772908753719,0.211312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| ||
|short_description=p6@TTC9 | |short_description=p6@TTC9 | ||
}} | }} |
Latest revision as of 20:41, 15 September 2015
Short description: | p6@TTC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TTC9_5end |
Coexpression cluster: | NA |
Association with transcript: | 286bp_to_ENST00000256367, NM_015351, uc001xmi.2_5end |
EntrezGene: | TTC9 |
HGNC: | 20267 |
UniProt: | Q92623 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.77e-09 | 2 |
mature alpha-beta T cell | 6.24e-08 | 18 |
alpha-beta T cell | 6.24e-08 | 18 |
immature T cell | 6.24e-08 | 18 |
mature T cell | 6.24e-08 | 18 |
immature alpha-beta T cell | 6.24e-08 | 18 |
CD4-positive, alpha-beta T cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pharynx | 5.05e-10 | 11 |
central nervous system | 1.99e-09 | 81 |
ectoderm-derived structure | 1.08e-08 | 171 |
ectoderm | 1.08e-08 | 171 |
presumptive ectoderm | 1.08e-08 | 171 |
neural tube | 3.16e-08 | 56 |
neural rod | 3.16e-08 | 56 |
future spinal cord | 3.16e-08 | 56 |
neural keel | 3.16e-08 | 56 |
nervous system | 3.58e-08 | 89 |
adult organism | 4.30e-08 | 114 |
chordate pharynx | 2.16e-07 | 10 |
pharyngeal region of foregut | 2.16e-07 | 10 |
regional part of nervous system | 2.88e-07 | 53 |
regional part of brain | 2.88e-07 | 53 |
tongue | 4.09e-07 | 3 |
gustatory system | 4.09e-07 | 3 |
future tongue | 4.09e-07 | 3 |
neural plate | 5.76e-07 | 82 |
presumptive neural plate | 5.76e-07 | 82 |
pons | 6.36e-07 | 3 |
cerebral hemisphere | 6.82e-07 | 32 |
organ system subdivision | 7.46e-07 | 223 |
ecto-epithelium | 7.57e-07 | 104 |