FFCP PHASE1:Hg19::chr2:233352519..233352525,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9427 | |EntrezGene=9427 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3147 | |HGNC=3147 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000482346_5end | |association_with_transcript=5bp_to_ENST00000482346_5end | ||
|cluster_id=chr2:233352519..233352525,- | |||
|coexpression_cluster_id=C2693 | |||
|description=CAGE_peak_3_at_ECEL1_5end | |description=CAGE_peak_3_at_ECEL1_5end | ||
|id=chr2:233352519..233352525,- | |id=chr2:233352519..233352525,- | ||
|ontology_enrichment_celltype=CL:0002322!8.11e-10!5 | |ontology_enrichment_celltype=CL:0002322!8.11e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0002553;6.47e-17;1!CL:0000082;6.39e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,6.47e-17,1;CL:0000082,6.02e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.93e-21;3!UBERON:0005425;2.08e-16;1 | |||
|ontology_enrichment_disease=DOID:5409!2.36e-07!4;DOID:1325!2.58e-07!7;DOID:3904!2.58e-07!7;DOID:1324!6.20e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:1324;6.90e-10;15!DOID:1325;9.31e-10;7!DOID:3904;9.31e-10;7!DOID:0050615;2.64e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,6.39e-10,15;DOID:1325,8.35e-10,7;DOID:3904,8.35e-10,7;DOID:0050615,2.46e-09,16 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.12e-16!86;UBERON:0001017!3.86e-16!82;UBERON:0000073!5.67e-16!94;UBERON:0001016!5.67e-16!94;UBERON:0007023!8.81e-16!115;UBERON:0001049!1.41e-12!57;UBERON:0005068!1.41e-12!57;UBERON:0006241!1.41e-12!57;UBERON:0007135!1.41e-12!57;UBERON:0003076!5.19e-12!15;UBERON:0003057!5.19e-12!15;UBERON:0003075!2.39e-11!86;UBERON:0007284!2.39e-11!86;UBERON:0004732!9.07e-11!13;UBERON:0000955!1.15e-10!69;UBERON:0006238!1.15e-10!69;UBERON:0002346!1.30e-10!90;UBERON:0001896!3.51e-10!3;UBERON:0005290!3.51e-10!3;UBERON:0010096!3.51e-10!3;UBERON:0002298!2.11e-09!8;UBERON:0002616!4.40e-09!59;UBERON:0004733!1.33e-08!12;UBERON:0002028!1.33e-08!12;UBERON:0007277!1.33e-08!12;UBERON:0003296!7.13e-08!4;UBERON:0010133!7.13e-08!4;UBERON:0004121!1.58e-07!169;UBERON:0001905!1.81e-07!2;UBERON:0002757!1.81e-07!2;UBERON:0010134!1.81e-07!2;UBERON:0002784!1.81e-07!2;UBERON:0005408!1.81e-07!2;UBERON:0001899!1.81e-07!2;UBERON:0001873!2.18e-07!2;UBERON:0010122!2.18e-07!2;UBERON:0001894!2.76e-07!7;UBERON:0006222!2.76e-07!7;UBERON:0000924!3.31e-07!173;UBERON:0006601!3.31e-07!173;UBERON:0005162!5.51e-07!2;UBERON:0000122!5.51e-07!2;UBERON:0002360!7.67e-07!2;UBERON:0000094!7.67e-07!2;UBERON:0007645!7.67e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.08e-16;1!UBERON:0001785;2.08e-16;1!UBERON:0002464;2.08e-16;1!UBERON:0004904;2.08e-16;1!UBERON:0001021;2.08e-16;1!UBERON:0001905;5.49e-09;2!UBERON:0002757;5.49e-09;2!UBERON:0010134;5.49e-09;2!UBERON:0005408;5.49e-09;2!UBERON:0001899;5.49e-09;2!UBERON:0003714;7.21e-09;2!UBERON:0005162;7.21e-09;2!UBERON:0000122;7.21e-09;2!UBERON:0004802;6.39e-08;19!UBERON:0000115;6.39e-08;19!UBERON:0002048;6.55e-07;22!UBERON:0004807;6.55e-07;22!UBERON:0000117;6.55e-07;22!UBERON:0000171;6.55e-07;22!UBERON:0000170;6.55e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.65e-16,1;UBERON:0001785,1.65e-16,1;UBERON:0002464,1.65e-16,1;UBERON:0004904,1.65e-16,1;UBERON:0001021,1.65e-16,1;UBERON:0003902,1.65e-16,1;UBERON:0005425,1.65e-16,1;UBERON:0000966,4.84e-11,6;UBERON:0005388,4.84e-11,6;UBERON:0001802,4.84e-11,6;UBERON:0001905,5.49e-09,2;UBERON:0002757,5.49e-09,2;UBERON:0010134,5.49e-09,2;UBERON:0005408,5.49e-09,2;UBERON:0001899,5.49e-09,2;UBERON:0003714,6.42e-09,2;UBERON:0005162,6.42e-09,2;UBERON:0000122,6.42e-09,2;UBERON:0004802,6.02e-08,19;UBERON:0000115,6.02e-08,19;UBERON:0002048,6.22e-07,22;UBERON:0000117,6.22e-07,22;UBERON:0000171,6.22e-07,22;UBERON:0000170,6.22e-07,22;UBERON:0005597,6.22e-07,22;UBERON:0000118,6.22e-07,22 | |||
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| ||
|short_description=p3@ECEL1 | |short_description=p3@ECEL1 | ||
}} | }} |
Latest revision as of 21:33, 15 September 2015
Short description: | p3@ECEL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ECEL1_5end |
Coexpression cluster: | C2693_anaplastic_nonsmall_bronchogenic_ovary_small_medulloblastoma_glassy |
Association with transcript: | 5bp_to_ENST00000482346_5end |
EntrezGene: | ECEL1 |
HGNC: | 3147 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 6.47e-17 | 1 |
epithelial cell of lung | 6.02e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.65e-16 | 1 |
cranial nerve | 1.65e-16 | 1 |
nerve trunk | 1.65e-16 | 1 |
nerve connecting eye with brain | 1.65e-16 | 1 |
nerve | 1.65e-16 | 1 |
retinal neural layer | 1.65e-16 | 1 |
presumptive neural retina | 1.65e-16 | 1 |
retina | 4.84e-11 | 6 |
photoreceptor array | 4.84e-11 | 6 |
posterior segment of eyeball | 4.84e-11 | 6 |
pineal body | 5.49e-09 | 2 |
regional part of epithalamus | 5.49e-09 | 2 |
secretory circumventricular organ | 5.49e-09 | 2 |
circumventricular organ | 5.49e-09 | 2 |
epithalamus | 5.49e-09 | 2 |
neural tissue | 6.42e-09 | 2 |
multi cell component structure | 6.42e-09 | 2 |
neuron projection bundle | 6.42e-09 | 2 |
respiratory tract epithelium | 6.02e-08 | 19 |
lung epithelium | 6.02e-08 | 19 |
lung | 6.22e-07 | 22 |
respiratory tube | 6.22e-07 | 22 |
respiration organ | 6.22e-07 | 22 |
pair of lungs | 6.22e-07 | 22 |
lung primordium | 6.22e-07 | 22 |
lung bud | 6.22e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 6.39e-10 | 15 |
bronchus cancer | 8.35e-10 | 7 |
bronchogenic carcinoma | 8.35e-10 | 7 |
respiratory system cancer | 2.46e-09 | 16 |