FFCP PHASE1:Hg19::chr9:131904295..131904314,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5524 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9308 | |||
|TSSclassifier=strong | |||
|UniProt=B7ZBQ0 | |||
|association_with_transcript=0bp_to_ENST00000434095_5end | |||
|cluster_id=chr9:131904295..131904314,+ | |||
|description=CAGE_peak_3_at_PPP2R4_5end | |||
|id=chr9:131904295..131904314,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.10e-24!180;CL:0000183!5.38e-18!59;CL:0000222!1.28e-17!119;CL:0000680!9.62e-16!57;CL:0000056!9.62e-16!57;CL:0000355!9.62e-16!57;CL:0000187!2.24e-15!54;CL:0000393!1.23e-13!60;CL:0000211!1.23e-13!60;CL:0000192!4.51e-10!42;CL:0000514!4.51e-10!42;CL:0000057!2.01e-09!75;CL:1000497!4.65e-09!18;CL:0002518!4.65e-09!18;CL:1000449!1.32e-08!16;CL:1000507!4.86e-08!12;CL:1000494!4.86e-08!12;CL:0002321!3.51e-07!248;CL:0000220!5.97e-07!246;CL:0002681!9.52e-07!13;CL:0002584!9.52e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000187;4.80e-10;55!CL:1000497;2.49e-09;17!CL:0002518;2.49e-09;17!CL:1000449;7.80e-09;15!CL:0000393;3.09e-08;61!CL:0000211;3.09e-08;61!CL:1000507;3.63e-08;10!CL:1000494;3.63e-08;10!CL:0000192;5.17e-08;43!CL:0000134;4.30e-07;55!CL:0002681;7.99e-07;12!CL:0002584;7.99e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.02e-18,121;CL:0000680,1.33e-16,58;CL:0000056,1.33e-16,58;CL:0000355,1.33e-16,58;CL:0000187,3.36e-16,55;CL:0000393,1.62e-14,61;CL:0000211,1.62e-14,61;CL:0000192,1.56e-10,43;CL:0000514,1.56e-10,43;CL:0000057,2.59e-09,76;CL:1000497,2.70e-09,17;CL:0002518,2.70e-09,17;CL:1000449,8.21e-09,15;CL:1000507,3.85e-08,10;CL:1000494,3.85e-08,10;CL:0002681,8.35e-07,12;CL:0002584,8.35e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000355;1.82e-09;58!CL:0000514;5.17e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.22e-19!365;UBERON:0000119!6.84e-18!312;UBERON:0005256!6.90e-18!143;UBERON:0000481!6.05e-17!347;UBERON:0000483!1.01e-16!309;UBERON:0001134!2.30e-16!61;UBERON:0002036!2.30e-16!61;UBERON:0003082!2.30e-16!61;UBERON:0004290!2.78e-16!70;UBERON:0002385!3.97e-16!63;UBERON:0001015!3.97e-16!63;UBERON:0000383!3.97e-16!63;UBERON:0000914!1.55e-15!83;UBERON:0002329!1.55e-15!83;UBERON:0003077!1.55e-15!83;UBERON:0003059!1.55e-15!83;UBERON:0007282!1.55e-15!83;UBERON:0009618!1.55e-15!83;UBERON:0007285!1.55e-15!83;UBERON:0000477!2.87e-13!286;UBERON:0003103!5.47e-13!69;UBERON:0002100!1.84e-12!216;UBERON:0000486!2.19e-12!82;UBERON:0003914!3.51e-12!118;UBERON:0002049!4.43e-11!79;UBERON:0007798!4.43e-11!79;UBERON:0004111!6.19e-11!241;UBERON:0000025!3.82e-10!194;UBERON:0004876!7.65e-10!20;UBERON:0004872!2.21e-09!84;UBERON:0000490!2.84e-09!138;UBERON:0000080!3.81e-09!18;UBERON:0002120!3.81e-09!18;UBERON:0004875!3.81e-09!18;UBERON:0005721!3.81e-09!18;UBERON:0005754!3.81e-09!18;UBERON:0007297!3.81e-09!18;UBERON:0003104!5.97e-09!238;UBERON:0009142!5.97e-09!238;UBERON:0000468!7.39e-09!659;UBERON:0006555!1.04e-08!17;UBERON:0005103!1.04e-08!17;UBERON:0000083!1.04e-08!17;UBERON:0009201!1.04e-08!17;UBERON:0004819!1.04e-08!17;UBERON:0006553!1.04e-08!17;UBERON:0003074!1.04e-08!17;UBERON:0003060!1.04e-08!17;UBERON:0004211!1.32e-08!16;UBERON:0001285!1.32e-08!16;UBERON:0007684!1.32e-08!16;UBERON:0003220!1.32e-08!16;UBERON:0004208!1.32e-08!16;UBERON:0001009!1.35e-08!113;UBERON:0004535!2.32e-08!110;UBERON:0003887!2.88e-08!21;UBERON:0000058!4.18e-08!26;UBERON:0009773!4.86e-08!12;UBERON:0001231!4.86e-08!12;UBERON:0004810!4.86e-08!12;UBERON:0002113!1.97e-07!27;UBERON:0003918!1.97e-07!27;UBERON:0005095!1.97e-07!27;UBERON:0007687!1.97e-07!27;UBERON:0000489!2.06e-07!32;UBERON:0003064!2.15e-07!37;UBERON:0002200!2.16e-07!11;UBERON:0006876!2.16e-07!11;UBERON:0007100!3.68e-07!27;UBERON:0000948!4.37e-07!24;UBERON:0005498!4.37e-07!24;UBERON:0004140!4.37e-07!24;UBERON:0009881!4.37e-07!24;UBERON:0004141!4.37e-07!24;UBERON:0003084!4.37e-07!24;UBERON:0007005!4.37e-07!24;UBERON:0004139!4.37e-07!24;UBERON:0004291!4.37e-07!24;UBERON:0000353!8.10e-07!17;UBERON:0001225!9.52e-07!13;UBERON:0008987!9.52e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;7.80e-09;15!UBERON:0004819;7.80e-09;15!UBERON:0001285;7.80e-09;15!UBERON:0007684;7.80e-09;15!UBERON:0002385;8.19e-09;31!UBERON:0001015;8.19e-09;31!UBERON:0000383;8.19e-09;31!UBERON:0004211;3.63e-08;10!UBERON:0009773;3.63e-08;10!UBERON:0001231;3.63e-08;10!UBERON:0004810;3.63e-08;10!UBERON:0006876;6.97e-08;11!UBERON:0002113;2.96e-07;24!UBERON:0011143;2.96e-07;24!UBERON:0000489;7.02e-07;29!UBERON:0007100;7.62e-07;25!UBERON:0001225;7.99e-07;12!UBERON:0008987;7.99e-07;12!UBERON:0000948;8.51e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.90e-22,160;UBERON:0009142,1.90e-22,160;UBERON:0007503,4.94e-19,78;UBERON:0001134,2.79e-17,62;UBERON:0002036,2.79e-17,62;UBERON:0003082,2.79e-17,62;UBERON:0002385,4.90e-17,64;UBERON:0001015,4.90e-17,64;UBERON:0000383,4.90e-17,64;UBERON:0007524,1.08e-16,73;UBERON:0002329,1.35e-16,71;UBERON:0003059,1.35e-16,71;UBERON:0007282,1.35e-16,71;UBERON:0004290,1.35e-16,71;UBERON:0009618,1.35e-16,71;UBERON:0003077,1.43e-16,72;UBERON:0007285,1.43e-16,72;UBERON:0000119,2.44e-15,309;UBERON:0005256,5.76e-15,122;UBERON:0000483,3.23e-14,306;UBERON:0003103,1.88e-13,68;UBERON:0003914,2.22e-12,117;UBERON:0000486,8.88e-12,83;UBERON:0002100,1.05e-11,199;UBERON:0002049,1.08e-10,78;UBERON:0007798,1.08e-10,78;UBERON:0000490,6.06e-10,148;UBERON:0001009,2.89e-09,112;UBERON:0004111,4.83e-09,240;UBERON:0004535,5.19e-09,109;UBERON:0004872,5.34e-09,83;UBERON:0006555,6.43e-09,16;UBERON:0004819,6.43e-09,16;UBERON:0004211,8.21e-09,15;UBERON:0009773,8.21e-09,15;UBERON:0001231,8.21e-09,15;UBERON:0001285,8.21e-09,15;UBERON:0007684,8.21e-09,15;UBERON:0004208,8.21e-09,15;UBERON:0000025,2.79e-08,192;UBERON:0004810,3.85e-08,10;UBERON:0002113,5.64e-08,26;UBERON:0003918,5.64e-08,26;UBERON:0011143,5.64e-08,26;UBERON:0005095,5.64e-08,26;UBERON:0007687,5.64e-08,26;UBERON:0006876,7.57e-08,11;UBERON:0010314,1.09e-07,132;UBERON:0007100,1.34e-07,27;UBERON:0000489,1.43e-07,31;UBERON:0000948,1.61e-07,24;UBERON:0005498,1.61e-07,24;UBERON:0004140,1.61e-07,24;UBERON:0009881,1.61e-07,24;UBERON:0004141,1.61e-07,24;UBERON:0003084,1.61e-07,24;UBERON:0007005,1.61e-07,24;UBERON:0004139,1.61e-07,24;UBERON:0004291,1.61e-07,24;UBERON:0001225,8.35e-07,12;UBERON:0008987,8.35e-07,12 | |||
|phase1_expression=7.26713517082227,5.78071414505655,10.8534891153898,3.00219895059391,1.78784437770915,9.59572376510406,2.53299878168311,1.26343974685366,0.783556884599516,2.94880723801811,1.39560233594486,0,1.05506791291381,19.4313174147273,26.8431874339612,12.101852636132,10.2458069764076,6.57279081348636,8.78279037822912,5.78668972960903,11.4240387096782,41.3760232351076,4.00730381983479,4.37998160233229,3.38965126905968,3.36218985290986,1.23150884174919,2.2826126580967,0,0,0,0,0.30120591877825,0.739508020333575,0.309868802321207,0.284338464974843,0,0,0,0.217010870715852,0,0,0,0.145398238779565,1.51150377475524,0.485168122375632,0,0,2.47765096716083,0,1.2808035326455,1.41889337933151,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0.674170453335254,1.22433556948361,0,1.27867425159808,0,0.199463657621632,0.426224750532694,0,0.56738522469114,0,0,1.0429658368404,1.3031330682307,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0664806419773,38.9006498628109,30.0477020332296,4.3372698286148,24.0642197105227,12.7464936685525,19.0868627292264,54.9897403441979,26.469748805939,29.9334686574461,78.7878027667341,1.30979075497713,1.09288586487763,0.370784442784429,0,0,0,0,0,0,2.78267370313387,0.860234595106124,1.73570250803797,1.13061588384802,2.93649605346934,3.02629846134074,0.835979866147242,12.9208379584664,11.7402866686614,3.68192674041137,3.62546385398232,7.60272105718513,3.66093086322254,2.20597848207521,8.91156142669936,1.96459402224975,1.12264686313085,0.675668882899933,0,0,4.21364011039937,0,0,0.436094052142534,6.95760732373446,2.02608818663328,1.98613771219828,8.03142538096678,5.32002573297536,15.1382952038423,16.0123493594557,15.5400555502811,8.40269795579369,6.7355336034844,6.21155231831143,60.9970433409074,106.5925460288,12.653357319025,4.37024107562449,2.2818872861778,1.19558944441441,0.939475989150119,0.485618833104395,1.40450806702248,1.02077085627447,4.42203542322365,2.37649296704261,2.37600571456411,7.17074094907815,4.55080680969013,11.4978902690598,1.5150250255866,2.00189631795143,0.554128230968366,3.07284334616587,0.919463387397059,8.26309323986282,8.28054937068154,3.94657198515496,2.56268866582281,2.54318281391474,4.80145753735044,3.09157587715317,7.47157566132325,5.3973888336161,3.03797398034279,3.80004320128675,2.01947019395292,1.56484827691909,7.43571861366535,4.61512470271599,6.54888638479662,9.15627198476633,0,0,0.286804595389004,7.56236978003491,2.78312513475119,6.50686080069303,7.25627385107593,4.54177531576131,0.72995471815166,9.38697193978896,17.3675053312079,4.14404764057442,0.928735856063958,2.16563844500876,0.709840800239063,0.337169380156203,0.482022059766964,0.661763836394364,0.653638332277218,0.474541238222193,0,0.196221465125346,0,4.42893272774789,33.658025712827,6.9967581926338,30.8718293909638,0,0,1.77236972004421,0,0.122988438543114,50.7840718483636,0.109750285408626,1.1240175325762,0,0.462942225792648,2.28065813717227,2.07986957055916,34.6395220860656,16.6939783164111,33.1092517745017,0.433099343283221,2.31492756288305,0,0.790204397959275,0,0,0,0,0.93733833986777,0,0.141775097242386,0.447792613514241,0,0.383382679165211,0,0.528290604079356,0.414656231081544,0,1.64115163454294,0.571481048629521,3.4378958300245,1.17217447210047,0,5.2442021278695,0.901029173531752,0,34.0878496409897,151.278143885148,15.3277017365786,8.66120495577111,32.1890801266694,4.22651376278,57.1766950657472,43.6831235027738,3.60090323966999,11.3479305618623,4.26275486425759,24.5922149092014,3.25572963234866,5.76268235746538,2.60588947434988,34.4730190280269,6.33561498346743,6.33022691825131,2.61460037580088,9.9972991182057,0,0,0,5.27174682081482,11.4861935834114,8.5582143024431,2.46128221334885,4.9314317412092,6.08807275015645,0,0,0,0,0.254094624222463,0,0,1.17261385734044,1.27587750330633,0,0,0,28.7098090622787,44.0150058532516,22.5149969670781,28.2840371681898,12.8468871933956,7.254311091561,28.4653638432293,2.40756879782175,22.7407504055985,4.1389228517002,3.98535359121262,7.55913591020983,3.5622281931914,72.0548259462885,44.2655016716004,0,0,0,0,1.66435439510497,1.81434175997808,10.4205279283886,3.99001130548962,5.3325417942284,15.6329762091955,4.09365799253363,6.11244900345709,28.1994326245483,5.08891989548763,12.0741973212926,2.13530605635904,2.59627214591811,3.48631135379878,0,2.80709058424599,0.0920809889358963,6.65923799354719,3.27764102412091,13.1124414959424,64.0703450328525,15.2490367466741,169.419550142201,58.4556898613043,27.8656300277192,6.8240030442538,5.27290486357199,11.6594594695155,13.880452742126,68.0075558235071,214.723223209877,19.1157204783779,23.2701282500043,72.3115457752636,0,0,18.9773092586128,88.2359396932208,25.7048931784799,1.95777922130672,0.0915694648183434,0.165018999841176,0,0,41.7778217594815,19.3341436584244,28.4989941662092,22.1045291605627,6.89182862422653,8.91588032406671,16.8219364940505,1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| |||
|short_description=p3@PPP2R4 | |||
}} |
Latest revision as of 22:14, 15 September 2015
Short description: | p3@PPP2R4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPP2R4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000434095_5end |
EntrezGene: | PPP2R4 |
HGNC: | 9308 |
UniProt: | B7ZBQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.02e-18 | 121 |
muscle precursor cell | 1.33e-16 | 58 |
myoblast | 1.33e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.33e-16 | 58 |
muscle cell | 3.36e-16 | 55 |
electrically responsive cell | 1.62e-14 | 61 |
electrically active cell | 1.62e-14 | 61 |
smooth muscle cell | 1.56e-10 | 43 |
smooth muscle myoblast | 1.56e-10 | 43 |
fibroblast | 2.59e-09 | 76 |
kidney cell | 2.70e-09 | 17 |
kidney epithelial cell | 2.70e-09 | 17 |
epithelial cell of nephron | 8.21e-09 | 15 |
kidney tubule cell | 3.85e-08 | 10 |
nephron tubule epithelial cell | 3.85e-08 | 10 |
kidney cortical cell | 8.35e-07 | 12 |
renal cortical epithelial cell | 8.35e-07 | 12 |