FFCP PHASE1:Hg19::chr4:149365827..149365870,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4306 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7979 | |||
|TSSclassifier=strong | |||
|UniProt=B0ZBF6 | |||
|association_with_transcript=0bp_to_ENST00000344721_5end | |||
|cluster_id=chr4:149365827..149365870,- | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_5_at_NR3C2_5end | |||
|id=chr4:149365827..149365870,- | |||
|ontology_enrichment_celltype=CL:0000791!1.13e-14!18;CL:0000789!1.13e-14!18;CL:0002420!1.13e-14!18;CL:0002419!1.13e-14!18;CL:0000790!1.13e-14!18;CL:0000838!8.40e-11!52;CL:0000625!8.73e-11!11;CL:0000542!2.23e-10!53;CL:0000051!2.23e-10!53;CL:0000084!1.33e-08!25;CL:0000827!1.33e-08!25;CL:0000624!8.39e-07!6;CL:0000236!8.46e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.71e-25;18!CL:0000789;5.71e-25;18!CL:0002419;5.71e-25;18!CL:0000625;1.72e-19;11!CL:0000084;1.37e-16;25!CL:0000542;2.41e-14;53!CL:0000236;6.02e-12;13!CL:0000624;5.73e-09;6!CL:0000623;3.41e-07;3!CL:0000226;6.55e-07;3!CL:0000842;6.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.54e-25,18;CL:0000789,5.54e-25,18;CL:0002420,5.54e-25,18;CL:0002419,5.54e-25,18;CL:0000790,5.54e-25,18;CL:0000838,1.83e-23,52;CL:0000542,7.60e-23,53;CL:0000051,7.60e-23,53;CL:0000625,1.64e-19,11;CL:0000084,1.34e-16,25;CL:0000827,1.34e-16,25;CL:0000236,3.18e-11,14;CL:0000624,5.81e-09,6;CL:0002087,8.37e-09,115;CL:0000738,4.97e-08,136;CL:0000623,3.15e-07,3;CL:0000825,3.15e-07,3;CL:0000226,6.62e-07,3;CL:0000842,6.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.71e-25;18!CL:0000051;2.41e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.53e-29!115;UBERON:0001049!5.38e-16!57;UBERON:0005068!5.38e-16!57;UBERON:0006241!5.38e-16!57;UBERON:0007135!5.38e-16!57;UBERON:0002619!1.02e-14!22;UBERON:0002780!2.25e-14!41;UBERON:0001890!2.25e-14!41;UBERON:0006240!2.25e-14!41;UBERON:0001893!9.04e-14!34;UBERON:0003080!9.32e-14!42;UBERON:0000955!1.12e-13!69;UBERON:0006238!1.12e-13!69;UBERON:0002616!2.17e-13!59;UBERON:0001950!3.26e-13!20;UBERON:0002020!3.62e-13!34;UBERON:0003528!3.62e-13!34;UBERON:0001869!4.33e-13!32;UBERON:0005743!5.09e-13!86;UBERON:0002791!5.14e-13!33;UBERON:0001017!5.61e-13!82;UBERON:0000956!4.91e-12!25;UBERON:0000203!4.91e-12!25;UBERON:0000073!5.66e-12!94;UBERON:0001016!5.66e-12!94;UBERON:0003075!4.86e-11!86;UBERON:0007284!4.86e-11!86;UBERON:0002346!5.54e-11!90;UBERON:0003056!4.52e-09!61;UBERON:0001871!5.45e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.01e-19;22!UBERON:0001950;2.50e-16;20!UBERON:0000956;2.93e-16;25!UBERON:0000203;2.93e-16;25!UBERON:0001869;1.38e-13;32!UBERON:0001893;3.36e-12;34!UBERON:0002791;4.17e-12;32!UBERON:0003528;8.95e-11;34!UBERON:0002020;8.95e-11;34!UBERON:0000200;1.69e-10;6!UBERON:0002780;5.31e-09;41!UBERON:0001890;5.31e-09;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.21e-19,22;UBERON:0001950,1.20e-16,20;UBERON:0000956,1.44e-16,25;UBERON:0000203,1.44e-16,25;UBERON:0001869,1.49e-15,32;UBERON:0007023,1.64e-14,114;UBERON:0001893,2.39e-14,34;UBERON:0002791,1.06e-13,32;UBERON:0003528,1.26e-12,34;UBERON:0002020,1.26e-12,34;UBERON:0002780,2.16e-12,41;UBERON:0001890,2.16e-12,41;UBERON:0003080,2.16e-12,41;UBERON:0006240,2.16e-12,41;UBERON:0000073,9.24e-12,53;UBERON:0002616,9.24e-12,53;UBERON:0000200,7.42e-11,6;UBERON:0001049,8.25e-11,56;UBERON:0005068,8.25e-11,56;UBERON:0006241,8.25e-11,56;UBERON:0007135,8.25e-11,56;UBERON:0000955,1.24e-10,68;UBERON:0006238,1.24e-10,68;UBERON:0001017,1.13e-08,81;UBERON:0003056,1.91e-08,61;UBERON:0001016,6.09e-08,89;UBERON:0003075,9.87e-08,82;UBERON:0007284,9.87e-08,82;UBERON:0002346,4.37e-07,86 | |||
|phase1_expression=1.09007027562334,0,0.563817616383885,0,0,0,0,0,0,0,0,1.74753097704138,0.527533956456907,0,0,0,0,0,0.487932798790507,0.246242116153576,0,0,0,0,0,0,0,0,0,2.30297638858328,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.601633342410425,1.08505435357926,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,2.66852776159066,1.28019066769952,1.20118796110804,1.72425731986345,0.661044872784862,1.90810750907073,10.8150464130795,6.45960908308033,5.3518251937532,0,1.12101712596307,0,9.04864942523632,11.3973121197258,4.11202997999018,0,6.51844533267181,4.73447805734733,5.84480185223734,0,0.883817722424512,1.55073726208535,0.541607727530031,0,0,0,0,0,5.6348894001583,7.22360235842225,3.1360657141493,0,4.21542542962113,0,1.51811815211702,5.09704662918555,5.20866763085135,2.85135613334512,2.40920190524436,1.4078527226986,1.24930726552346,3.78843603270427,1.64225599384209,7.4594494993151,14.1743303765259,11.1514790989755,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.785874452986276,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0.838998872419812,0,0.835979866147242,1.55050055501597,0.71153252537342,0.66944122552934,0,0,0,0.735326160691737,0.81014194788176,0.17859945656816,0,0.225222960966644,0,0,0.366403487860815,1.31780417436063,3.87780264148325,0,0.496971951695318,0.12663051166458,5.03154887090231,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0.864719720501769,0.50496973370552,0,0,0,0,0,0,0,0,0,0,1.29271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,5.31983052545203,7.97822026980214,5.90377966886842,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,3.51505644408909,4.09856981555372,5.65656056358255,2.12189300012382,3.32870879020994,3.0239029332968,0.248107807818777,1.68808170616869,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0,0.0821271560138091,1.03850885836724,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0.192190067365106,0,0.4046311234222,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,2.29391162142713,2.84823593587081,0.952927101831156,0.822724546172388,1.29694662238543,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0.23874448473769,1.48482340416319,3.99308912729002,0.994147647766298,0.703347082052564,0.890469640183247,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0,0,0,0.269605053441981,0.358042349351218,0,1.08507746200627,0,0,2.90799823828566,2.31920245404628,3.99227596002388,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0.520874984799877,0,0.60298219312704,1.52581736317083,2.54332297841817,1.77328571372128,0.658156191461918,0,0.139423744278603,1.00035336054936,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.41532103205343,1.83309043480088,0,0,0.104421949505455,0.943615861729479,1.60515529459758,0.234264445725339,0,0,0,0,1.20990716048664,1.83643656978294,0.505492637027904,0.150323419414493,1.03688191397247,0,0,0,0,0.569219092059585,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,3.48209377757333,0,0.240476460754601,0.426905989478705,0.599428828746391,0,0,1.54435498075768,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0.558564802544508,1.60412296808179,0,0,0,0.446342914883745,0.268733889946905,0,0,0,0,0,0.984274815147488,0,3.97614844904652,1.36203406111576,0,0,0,0,0,2.73373004961111,0,0.551639951094387,0.891727998294968,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0.387848869084652,0.39669780522807,0,0,0.213574825135389,1.10043013569766,0,0.992332043623902,0,0,0,0,0,0,0,0.157054096250234,1.77213635993397,1.46431517882356,3.8809188519015,0,0.110929051536852,0.558867626472451,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0.604923695052956,0,1.18284119991707,0.159296767163702,0.449803112163605,0,0,0,0.521745061811734,0,1.14241563650639,0,0,0,0,0.796191777397232,0,0.686791410365586,0,1.26184898228651,0,0,2.3489486276869,0,0,0,0,0,0,0.530067437837643,0,0.168942440653073,0,0,0,1.7973596699725,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0.157265941855896,0,0,0.850299680406731,0.123935764259002,0,0,0,0.80057074828547,0,0,2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| |||
|short_description=p5@NR3C2 | |||
}} |
Latest revision as of 00:51, 16 September 2015
Short description: | p5@NR3C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NR3C2_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 0bp_to_ENST00000344721_5end |
EntrezGene: | NR3C2 |
HGNC: | 7979 |
UniProt: | B0ZBF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.54e-25 | 18 |
alpha-beta T cell | 5.54e-25 | 18 |
immature T cell | 5.54e-25 | 18 |
mature T cell | 5.54e-25 | 18 |
immature alpha-beta T cell | 5.54e-25 | 18 |
lymphoid lineage restricted progenitor cell | 1.83e-23 | 52 |
lymphocyte | 7.60e-23 | 53 |
common lymphoid progenitor | 7.60e-23 | 53 |
CD8-positive, alpha-beta T cell | 1.64e-19 | 11 |
T cell | 1.34e-16 | 25 |
pro-T cell | 1.34e-16 | 25 |
B cell | 3.18e-11 | 14 |
CD4-positive, alpha-beta T cell | 5.81e-09 | 6 |
nongranular leukocyte | 8.37e-09 | 115 |
leukocyte | 4.97e-08 | 136 |
natural killer cell | 3.15e-07 | 3 |
pro-NK cell | 3.15e-07 | 3 |
single nucleate cell | 6.62e-07 | 3 |
mononuclear cell | 6.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.21e-19 | 22 |
neocortex | 1.20e-16 | 20 |
cerebral cortex | 1.44e-16 | 25 |
pallium | 1.44e-16 | 25 |
cerebral hemisphere | 1.49e-15 | 32 |
adult organism | 1.64e-14 | 114 |
telencephalon | 2.39e-14 | 34 |
regional part of telencephalon | 1.06e-13 | 32 |
brain grey matter | 1.26e-12 | 34 |
gray matter | 1.26e-12 | 34 |
regional part of forebrain | 2.16e-12 | 41 |
forebrain | 2.16e-12 | 41 |
anterior neural tube | 2.16e-12 | 41 |
future forebrain | 2.16e-12 | 41 |
regional part of nervous system | 9.24e-12 | 53 |
regional part of brain | 9.24e-12 | 53 |
gyrus | 7.42e-11 | 6 |
neural tube | 8.25e-11 | 56 |
neural rod | 8.25e-11 | 56 |
future spinal cord | 8.25e-11 | 56 |
neural keel | 8.25e-11 | 56 |
brain | 1.24e-10 | 68 |
future brain | 1.24e-10 | 68 |
central nervous system | 1.13e-08 | 81 |
pre-chordal neural plate | 1.91e-08 | 61 |
nervous system | 6.09e-08 | 89 |
neural plate | 9.87e-08 | 82 |
presumptive neural plate | 9.87e-08 | 82 |
neurectoderm | 4.37e-07 | 86 |