FFCP PHASE1:Hg19::chr4:149366111..149366128,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4306 | |EntrezGene=4306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7979 | |HGNC=7979 | ||
|TSSclassifier=strong | |||
|UniProt=B0ZBF6 | |UniProt=B0ZBF6 | ||
|association_with_transcript=-261bp_to_ENST00000344721_5end | |association_with_transcript=-261bp_to_ENST00000344721_5end | ||
|cluster_id=chr4:149366111..149366128,- | |||
|description=CAGE_peak_7_at_NR3C2_5end | |description=CAGE_peak_7_at_NR3C2_5end | ||
|id=chr4:149366111..149366128,- | |id=chr4:149366111..149366128,- | ||
|ontology_enrichment_celltype=CL:0000791!1.19e-10!18;CL:0000789!1.19e-10!18;CL:0002420!1.19e-10!18;CL:0002419!1.19e-10!18;CL:0000790!1.19e-10!18;CL:0000625!1.63e-07!11;CL:0000838!9.27e-07!52 | |ontology_enrichment_celltype=CL:0000791!1.19e-10!18;CL:0000789!1.19e-10!18;CL:0002420!1.19e-10!18;CL:0002419!1.19e-10!18;CL:0000790!1.19e-10!18;CL:0000625!1.63e-07!11;CL:0000838!9.27e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.46e-15;18!CL:0000789;1.46e-15;18!CL:0002419;1.46e-15;18!CL:0000084;4.55e-10;25!CL:0000624;2.41e-09;6!CL:0000625;2.45e-09;11!CL:0000542;5.68e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.93e-16,18;CL:0000789,4.93e-16,18;CL:0002420,4.93e-16,18;CL:0002419,4.93e-16,18;CL:0000790,4.93e-16,18;CL:0000838,3.03e-12,52;CL:0000542,7.03e-12,53;CL:0000051,7.03e-12,53;CL:0000084,2.19e-10,25;CL:0000827,2.19e-10,25;CL:0000624,1.09e-09,6;CL:0000625,1.57e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.46e-15;18!UBERON:0007123;3.70e-08;5!CL:0000051;5.68e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.05e-36!115;UBERON:0001049!1.47e-17!57;UBERON:0005068!1.47e-17!57;UBERON:0006241!1.47e-17!57;UBERON:0007135!1.47e-17!57;UBERON:0003080!4.97e-16!42;UBERON:0002780!1.83e-15!41;UBERON:0001890!1.83e-15!41;UBERON:0006240!1.83e-15!41;UBERON:0002616!1.84e-14!59;UBERON:0002020!9.70e-14!34;UBERON:0003528!9.70e-14!34;UBERON:0001893!1.42e-13!34;UBERON:0002791!3.59e-13!33;UBERON:0001869!3.97e-13!32;UBERON:0000955!4.09e-13!69;UBERON:0006238!4.09e-13!69;UBERON:0001017!7.79e-13!82;UBERON:0002619!7.98e-13!22;UBERON:0005743!1.49e-12!86;UBERON:0001950!2.03e-11!20;UBERON:0003075!1.05e-10!86;UBERON:0007284!1.05e-10!86;UBERON:0000073!2.18e-10!94;UBERON:0001016!2.18e-10!94;UBERON:0000956!2.65e-10!25;UBERON:0000203!2.65e-10!25;UBERON:0002346!2.65e-10!90;UBERON:0003056!6.03e-09!61;UBERON:0000025!1.81e-08!194;UBERON:0004111!2.87e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.48e-18;22!UBERON:0001950;6.83e-16;20!UBERON:0000956;1.38e-15;25!UBERON:0000203;1.38e-15;25!UBERON:0002791;6.45e-13;32!UBERON:0001869;1.32e-12;32!UBERON:0002780;2.79e-11;41!UBERON:0001890;2.79e-11;41!UBERON:0001893;5.04e-11;34!UBERON:0003528;5.48e-11;34!UBERON:0002020;5.48e-11;34!UBERON:0000073;8.34e-09;53!UBERON:0002616;8.34e-09;53!UBERON:0002046;3.70e-08;5!UBERON:0002021;2.95e-07;5!UBERON:0001871;5.18e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.44e-18,22;UBERON:0001950,1.55e-15,20;UBERON:0000956,2.28e-15,25;UBERON:0000203,2.28e-15,25;UBERON:0002791,1.11e-13,32;UBERON:0001869,1.11e-13,32;UBERON:0007023,1.61e-13,114;UBERON:0002780,4.89e-13,41;UBERON:0001890,4.89e-13,41;UBERON:0003080,4.89e-13,41;UBERON:0006240,4.89e-13,41;UBERON:0000073,7.12e-13,53;UBERON:0002616,7.12e-13,53;UBERON:0003528,1.43e-12,34;UBERON:0002020,1.43e-12,34;UBERON:0001893,1.43e-12,34;UBERON:0001049,8.39e-12,56;UBERON:0005068,8.39e-12,56;UBERON:0006241,8.39e-12,56;UBERON:0007135,8.39e-12,56;UBERON:0000955,4.26e-10,68;UBERON:0006238,4.26e-10,68;UBERON:0001017,6.88e-09,81;UBERON:0002046,2.36e-08,5;UBERON:0004117,2.36e-08,5;UBERON:0007689,2.36e-08,5;UBERON:0007123,2.36e-08,5;UBERON:0003091,2.36e-08,5;UBERON:0001016,2.82e-07,89;UBERON:0002021,2.98e-07,5;UBERON:0001871,6.72e-07,6;UBERON:0003056,6.88e-07,61 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.737201809504527,2.79120467188971,5.02415155899396,2.11013582582763,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.15148819429164,0.309632246632152,0,0,0,0,0,0,0,1.20326668482085,0.217010870715852,0,0.647787332037959,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,1.13477044938228,0,0.251248665256743,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0.546138611262131,1.77901850772711,2.13365111283254,0.800791974072025,2.87376219977242,0.661044872784862,0,1.1384259382189,7.6340834618222,3.82273228125229,0,0,0,3.14735632182133,1.96505381374582,4.72883447698871,0,2.60737813306872,1.89379122293893,5.84480185223734,0,1.17842362989935,0.221533894583621,1.08321545506006,0,0,0,0,0.289803085735052,5.48660283699624,7.22360235842225,9.40819714244791,0,1.91610246800961,2.06176467289578,2.27717722817553,1.91139248594458,0,0.950452044448374,4.51725357233318,4.60751800155906,6.24653632761729,1.65744076430812,0.821127996921047,6.65302252641617,4.54648332831962,5.06885413589796,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0.993812036833525,0.860234595106124,1.04142150482278,0.56530794192401,0.838998872419812,1.6507082516404,0.208994966536811,1.55050055501597,2.13459757612026,1.00416183829401,0.805658634218294,0,0.24406205754817,1.10298924103761,2.43042584364528,0.892997282840798,1.12264686313085,0.563057402416611,0,0,0.732806975721629,0,0,0,0,0.12663051166458,0.794455084879313,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0.61417158655884,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,0.720599767084807,0.75745460055828,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0,0,1.77327684181734,2.80315847317372,1.79680250791648,0,0,0.773288812777695,0,1.27587750330633,0,0,0.414415513436035,0,0,0,0,0.356857977594324,0.315404830067869,0.35142424497814,0,0,0,0,0,0,0,0,5.37596867919507,2.37285620900479,2.02782359826544,2.12189300012382,0,3.93107381328584,0.992431231275107,1.2276957863045,0.561320188866147,0.256278298511402,0,0.482561763430822,0,0.462629081407967,0,0,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0.385076685522074,0,0,0.105551628892876,1.13733384070897,0.680374821106063,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.721287081534056,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0.192190067365106,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0.507447609232169,0,0.569647187174163,2.1440859791201,2.05681136543097,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,2.86493381685228,1.78178808499583,3.07160702099232,1.9882952955326,1.40669416410513,1.33570446027487,0,0,0.19924798825107,1.65770349318689,2.01546198283421,0.102268682502155,0,0,0.718946809178615,0.179021174675609,0,0.986434056369336,2.3948309234694,0,1.93866549219044,0.463840490809256,1.99613798001194,0,0,1.44999915086959,0,0.508507300585533,0,0,0.583209226766509,0.173624994933292,0.885741385813839,1.08536794762867,0,1.10579259931225,1.18219047581419,2.19385397153973,0,0.41827123283581,2.15460723810632,0.455768223388005,0,0,0,1.5950057986596,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.94606641907346,1.22206028986725,0,0.123563938946503,0,0.269604531922708,4.01288823649394,1.1713222286267,0,0,0,0,1.20990716048664,2.14250933141343,0.126373159256976,0.300646838828985,0.207376382794494,0,0,0,0,1.42304773014896,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0.90392296312213,0.137041924646751,0.19871461170299,1.01297273529406,0,0.480952921509202,1.49417096317547,0.799238438328521,0,0,5.8342299273068,0,0,0,0.271808412147228,0,0,0,0.600420288709789,1.23214841002794,0,0,0,0.279282401272254,1.3749625440701,0.717873024576814,0.599037001496973,0,0.446342914883745,0.403100834920358,1.44119953416961,0,0,0,0,2.95282444544246,0,3.97614844904652,1.77064427945048,0,0,0,0,0,0.850493793212345,0,0.394028536495991,0.629455057619977,0.316801009558219,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,0,0.646414781807753,0.79339561045614,0.171086837884329,0,1.38823636338003,2.35806457649499,0.414239055347196,1.9846640872478,0,0,0,0,0.5013797880454,0.306345576763462,0,0,1.77213635993397,0.610131324509816,1.1267183763585,2.29363678276028,1.3311486184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| ||
|short_description=p7@NR3C2 | |short_description=p7@NR3C2 | ||
}} | }} |
Latest revision as of 00:51, 16 September 2015
Short description: | p7@NR3C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NR3C2_5end |
Coexpression cluster: | NA |
Association with transcript: | -261bp_to_ENST00000344721_5end |
EntrezGene: | NR3C2 |
HGNC: | 7979 |
UniProt: | B0ZBF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.93e-16 | 18 |
alpha-beta T cell | 4.93e-16 | 18 |
immature T cell | 4.93e-16 | 18 |
mature T cell | 4.93e-16 | 18 |
immature alpha-beta T cell | 4.93e-16 | 18 |
lymphoid lineage restricted progenitor cell | 3.03e-12 | 52 |
lymphocyte | 7.03e-12 | 53 |
common lymphoid progenitor | 7.03e-12 | 53 |
T cell | 2.19e-10 | 25 |
pro-T cell | 2.19e-10 | 25 |
CD4-positive, alpha-beta T cell | 1.09e-09 | 6 |
CD8-positive, alpha-beta T cell | 1.57e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 4.44e-18 | 22 |
neocortex | 1.55e-15 | 20 |
cerebral cortex | 2.28e-15 | 25 |
pallium | 2.28e-15 | 25 |
regional part of telencephalon | 1.11e-13 | 32 |
cerebral hemisphere | 1.11e-13 | 32 |
adult organism | 1.61e-13 | 114 |
regional part of forebrain | 4.89e-13 | 41 |
forebrain | 4.89e-13 | 41 |
anterior neural tube | 4.89e-13 | 41 |
future forebrain | 4.89e-13 | 41 |
regional part of nervous system | 7.12e-13 | 53 |
regional part of brain | 7.12e-13 | 53 |
brain grey matter | 1.43e-12 | 34 |
gray matter | 1.43e-12 | 34 |
telencephalon | 1.43e-12 | 34 |
neural tube | 8.39e-12 | 56 |
neural rod | 8.39e-12 | 56 |
future spinal cord | 8.39e-12 | 56 |
neural keel | 8.39e-12 | 56 |
brain | 4.26e-10 | 68 |
future brain | 4.26e-10 | 68 |
central nervous system | 6.88e-09 | 81 |
thyroid gland | 2.36e-08 | 5 |
pharyngeal pouch | 2.36e-08 | 5 |
thyroid diverticulum | 2.36e-08 | 5 |
pharyngeal pouch 2 | 2.36e-08 | 5 |
thyroid primordium | 2.36e-08 | 5 |
nervous system | 2.82e-07 | 89 |
occipital lobe | 2.98e-07 | 5 |
temporal lobe | 6.72e-07 | 6 |
pre-chordal neural plate | 6.88e-07 | 61 |