FFCP PHASE1:Hg19::chr1:226250506..226250548,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:226250506..226250548,+ to FFCP PHASE1:Hg19::chr1:226250506..226250548,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=440926 | |EntrezGene=440926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=42980 | |HGNC=42980 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=78bp_to_NR_002315_5end | |||
|cluster_id=chr1:226250506..226250548,+ | |||
|coexpression_cluster_id=C1348 | |||
|description=CAGE_peak_2_at_H3F3AP4_5end | |||
|id=chr1:226250506..226250548,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.62e-27!140;CL:0000037!9.33e-23!172;CL:0000566!9.33e-23!172;CL:0000988!2.81e-21!182;CL:0002057!1.90e-20!42;CL:0002032!1.20e-19!165;CL:0000837!1.20e-19!165;CL:0002087!1.90e-19!119;CL:0002031!2.85e-19!124;CL:0000860!5.55e-19!45;CL:0000766!2.56e-18!76;CL:0000557!6.36e-14!71;CL:0000763!1.29e-13!112;CL:0000049!1.29e-13!112;CL:0002009!2.43e-13!65;CL:0000839!3.81e-13!70;CL:0002194!8.43e-13!63;CL:0000576!8.43e-13!63;CL:0000040!8.43e-13!63;CL:0000559!8.43e-13!63;CL:0000791!2.80e-08!18;CL:0000789!2.80e-08!18;CL:0002420!2.80e-08!18;CL:0002419!2.80e-08!18;CL:0000790!2.80e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.26e-31;33!CL:0002057;3.26e-31;33!CL:0000473;5.40e-23;39!CL:0000234;5.40e-23;39!CL:0000576;1.15e-21;48!CL:0000766;1.74e-19;69!CL:0000791;4.60e-16;18!CL:0000789;4.60e-16;18!CL:0002419;4.60e-16;18!CL:0002087;3.74e-13;104!CL:0000094;6.35e-13;8!CL:0000084;5.56e-12;25!CL:0000738;2.31e-11;136!CL:0000624;9.13e-10;6!CL:0000625;1.60e-09;11!CL:0000763;2.86e-09;100!CL:0000081;7.64e-09;11!CL:0000988;1.75e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.87e-53,136;CL:0000037,2.55e-43,168;CL:0000766,2.56e-43,72;CL:0002087,3.82e-42,115;CL:0000988,7.24e-41,177;CL:0000860,5.03e-40,42;CL:0002057,5.03e-40,42;CL:0002031,8.70e-40,120;CL:0002032,1.23e-37,161;CL:0000837,1.23e-37,161;CL:0000473,3.56e-35,48;CL:0000234,3.56e-35,48;CL:0000839,1.21e-31,66;CL:0000557,5.84e-31,67;CL:0002194,1.43e-30,59;CL:0000576,1.43e-30,59;CL:0000040,1.43e-30,59;CL:0000559,1.43e-30,59;CL:0002009,3.85e-29,61;CL:0000763,1.35e-26,108;CL:0000049,1.35e-26,108;CL:0000791,7.59e-16,18;CL:0000789,7.59e-16,18;CL:0002420,7.59e-16,18;CL:0002419,7.59e-16,18;CL:0000790,7.59e-16,18;CL:0000134,3.10e-13,354;CL:0000094,6.13e-13,8;CL:0002320,1.69e-12,361;CL:0000084,9.06e-12,25;CL:0000827,9.06e-12,25;CL:0000219,2.07e-10,386;CL:0000838,2.20e-10,52;CL:0000542,4.66e-10,53;CL:0000051,4.66e-10,53;CL:0000625,1.63e-09,11;CL:0000624,1.71e-09,6;CL:0000081,7.44e-09,11;CL:0000048,3.95e-08,427;CL:0000034,6.06e-08,441;CL:0000723,1.06e-07,433;CL:0002393,3.66e-07,9;CL:0002397,3.66e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.49e-28;42!CL:0000790;4.60e-16;18!CL:0000049;1.17e-08;108 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.81e-16!102;UBERON:0003061!6.81e-16!102;UBERON:0002193!7.12e-16!112;UBERON:0002371!1.98e-12!80;UBERON:0001474!4.42e-11!86;UBERON:0002405!2.48e-08!115;UBERON:0004765!5.48e-08!101;UBERON:0001434!5.48e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-08;15!UBERON:0000179;1.09e-08;15!UBERON:0000463;1.09e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.81e-32,98;UBERON:0003061,1.81e-32,98;UBERON:0002193,2.00e-30,108;UBERON:0002371,4.11e-27,76;UBERON:0001474,4.31e-24,82;UBERON:0002405,5.23e-23,93;UBERON:0004765,1.03e-20,90;UBERON:0001434,2.77e-17,100;UBERON:0003081,3.81e-12,203;UBERON:0002384,5.12e-12,371;UBERON:0000178,9.27e-09,15;UBERON:0000179,9.27e-09,15;UBERON:0000463,9.27e-09,15 | |||
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| ||
|short_description=p2@H3F3AP4 | |||
}} | }} |
Latest revision as of 01:08, 16 September 2015
Short description: | p2@H3F3AP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_H3F3AP4_5end |
Coexpression cluster: | C1348_Neutrophils_Natural_CD8_Mast_CD19_CD4_Eosinophils |
Association with transcript: | 78bp_to_NR_002315_5end |
EntrezGene: | H3F3AP4 |
HGNC: | 42980 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.81e-32 | 98 |
blood island | 1.81e-32 | 98 |
hemolymphoid system | 2.00e-30 | 108 |
bone marrow | 4.11e-27 | 76 |
bone element | 4.31e-24 | 82 |
immune system | 5.23e-23 | 93 |
skeletal element | 1.03e-20 | 90 |
skeletal system | 2.77e-17 | 100 |
lateral plate mesoderm | 3.81e-12 | 203 |
connective tissue | 5.12e-12 | 371 |
blood | 9.27e-09 | 15 |
haemolymphatic fluid | 9.27e-09 | 15 |
organism substance | 9.27e-09 | 15 |