FFCP PHASE1:Hg19::chrX:55478725..55478733,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:55478725..55478733,+
|short_description=p5@MAGEH1
|description=CAGE_peak_5_at_MAGEH1_5end
|association_with_transcript=187bp_to_ENST00000342972,NM_014061,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=28986 | |EntrezGene=28986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24092 | |HGNC=24092 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H213 | |UniProt=Q9H213 | ||
|association_with_transcript=187bp_to_ENST00000342972,NM_014061,uc004dum.2_5end | |||
|cluster_id=chrX:55478725..55478733,+ | |||
|description=CAGE_peak_5_at_MAGEH1_5end | |||
|id=chrX:55478725..55478733,+ | |||
|ontology_enrichment_celltype=CL:0000791!8.66e-13!18;CL:0000789!8.66e-13!18;CL:0002420!8.66e-13!18;CL:0002419!8.66e-13!18;CL:0000790!8.66e-13!18;CL:0000624!5.96e-09!6;CL:0000084!6.99e-08!25;CL:0000827!6.99e-08!25;CL:0000625!4.24e-07!11;CL:0000148!9.14e-07!10;CL:0000541!9.14e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.32e-28;6!CL:0000898;2.68e-15;3!CL:0000791;5.71e-12;18!CL:0000789;5.71e-12;18!CL:0002419;5.71e-12;18!CL:0000815;7.37e-11;2!CL:0000792;7.37e-11;2!CL:0002677;7.37e-11;2!CL:0000084;2.40e-08;25!CL:0000623;7.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.31e-28,6;CL:0000898,2.97e-15,3;CL:0000791,6.04e-12,18;CL:0000789,6.04e-12,18;CL:0002420,6.04e-12,18;CL:0002419,6.04e-12,18;CL:0000790,6.04e-12,18;CL:0000815,9.87e-11,2;CL:0000792,9.87e-11,2;CL:0002677,9.87e-11,2;CL:0000838,1.61e-08,52;CL:0000084,2.49e-08,25;CL:0000827,2.49e-08,25;CL:0000542,2.55e-08,53;CL:0000051,2.55e-08,53;CL:0000623,8.05e-07,3;CL:0000825,8.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.71e-12;18!UBERON:0006241;1.90e-07;3!UBERON:0003057;1.90e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.11e-25!57;UBERON:0005068!2.11e-25!57;UBERON:0006241!2.11e-25!57;UBERON:0007135!2.11e-25!57;UBERON:0007023!2.73e-23!115;UBERON:0001017!5.63e-23!82;UBERON:0005743!3.73e-22!86;UBERON:0000955!4.47e-21!69;UBERON:0006238!4.47e-21!69;UBERON:0002616!8.65e-21!59;UBERON:0000073!1.48e-20!94;UBERON:0001016!1.48e-20!94;UBERON:0002780!2.93e-19!41;UBERON:0001890!2.93e-19!41;UBERON:0006240!2.93e-19!41;UBERON:0003075!2.99e-19!86;UBERON:0007284!2.99e-19!86;UBERON:0003080!1.47e-18!42;UBERON:0001893!6.93e-18!34;UBERON:0002346!1.08e-17!90;UBERON:0002020!1.28e-17!34;UBERON:0003528!1.28e-17!34;UBERON:0002791!4.47e-17!33;UBERON:0001869!5.74e-16!32;UBERON:0003056!3.73e-13!61;UBERON:0000153!6.49e-12!129;UBERON:0007811!6.49e-12!129;UBERON:0002619!2.87e-11!22;UBERON:0000033!5.57e-11!123;UBERON:0000956!1.95e-10!25;UBERON:0000203!1.95e-10!25;UBERON:0004121!1.19e-09!169;UBERON:0002308!1.71e-09!9;UBERON:0000125!1.71e-09!9;UBERON:0001950!1.80e-09!20;UBERON:0000924!4.69e-09!173;UBERON:0006601!4.69e-09!173;UBERON:0003076!4.98e-08!15;UBERON:0003057!4.98e-08!15;UBERON:0009663!6.21e-08!7;UBERON:0000200!1.61e-07!6;UBERON:0002420!1.92e-07!9;UBERON:0007245!1.92e-07!9;UBERON:0010009!1.92e-07!9;UBERON:0010011!1.92e-07!9;UBERON:0000454!1.92e-07!9;UBERON:0002298!9.04e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.74e-10;2!UBERON:0000122;1.74e-10;2!UBERON:0002771;3.05e-10;2!UBERON:0002240;1.90e-07;3!UBERON:0005174;1.90e-07;3!UBERON:0001137;1.90e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,2.31e-10,2;UBERON:0000122,2.31e-10,2;UBERON:0002771,5.33e-10,2;UBERON:0001049,3.45e-09,56;UBERON:0005068,3.45e-09,56;UBERON:0006241,3.45e-09,56;UBERON:0007135,3.45e-09,56;UBERON:0001016,5.57e-08,89;UBERON:0001017,8.15e-08,81;UBERON:0002240,1.57e-07,3;UBERON:0005174,1.57e-07,3;UBERON:0001137,1.57e-07,3;UBERON:0002780,3.34e-07,41;UBERON:0001890,3.34e-07,41;UBERON:0003080,3.34e-07,41;UBERON:0006240,3.34e-07,41;UBERON:0007023,8.37e-07,114 | |||
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| ||
|short_description=p5@MAGEH1 | |||
}} | }} |
Latest revision as of 01:55, 16 September 2015
Short description: | p5@MAGEH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MAGEH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 187bp_to_ENST00000342972, NM_014061, uc004dum.2_5end |
EntrezGene: | MAGEH1 |
HGNC: | 24092 |
UniProt: | Q9H213 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.31e-28 | 6 |
naive T cell | 2.97e-15 | 3 |
mature alpha-beta T cell | 6.04e-12 | 18 |
alpha-beta T cell | 6.04e-12 | 18 |
immature T cell | 6.04e-12 | 18 |
mature T cell | 6.04e-12 | 18 |
immature alpha-beta T cell | 6.04e-12 | 18 |
regulatory T cell | 9.87e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.87e-11 | 2 |
naive regulatory T cell | 9.87e-11 | 2 |
lymphoid lineage restricted progenitor cell | 1.61e-08 | 52 |
T cell | 2.49e-08 | 25 |
pro-T cell | 2.49e-08 | 25 |
lymphocyte | 2.55e-08 | 53 |
common lymphoid progenitor | 2.55e-08 | 53 |
natural killer cell | 8.05e-07 | 3 |
pro-NK cell | 8.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 2.31e-10 | 2 |
neuron projection bundle | 2.31e-10 | 2 |
middle temporal gyrus | 5.33e-10 | 2 |
neural tube | 3.45e-09 | 56 |
neural rod | 3.45e-09 | 56 |
future spinal cord | 3.45e-09 | 56 |
neural keel | 3.45e-09 | 56 |
nervous system | 5.57e-08 | 89 |
central nervous system | 8.15e-08 | 81 |
spinal cord | 1.57e-07 | 3 |
dorsal region element | 1.57e-07 | 3 |
dorsum | 1.57e-07 | 3 |
regional part of forebrain | 3.34e-07 | 41 |
forebrain | 3.34e-07 | 41 |
anterior neural tube | 3.34e-07 | 41 |
future forebrain | 3.34e-07 | 41 |
adult organism | 8.37e-07 | 114 |