FFCP PHASE1:Hg19::chr6:153019023..153019043,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:153019023..153019043,+ to FFCP PHASE1:Hg19::chr6:153019023..153019043,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80177 | |EntrezGene=80177 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23172 | |HGNC=23172 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N699,E9PQ55 | |UniProt=Q8N699,E9PQ55 | ||
|association_with_transcript=0bp_to_ENST00000367245,ENST00000529453,NM_025107,uc003qpc.3,uc003qpd.3,uc010kjc.1_5end | |||
|cluster_id=chr6:153019023..153019043,+ | |||
|coexpression_cluster_id=C1376 | |||
|description=CAGE_peak_2_at_MYCT1_5end | |||
|id=chr6:153019023..153019043,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.20e-19!24;CL:0000222!8.04e-19!119;CL:0000115!6.05e-17!35;CL:0000359!9.65e-17!32;CL:0000071!5.36e-15!18;CL:0002546!5.36e-15!18;CL:0000213!6.02e-13!57;CL:0000215!6.02e-13!57;CL:0002078!3.95e-12!44;CL:0000192!2.10e-11!42;CL:0000514!2.10e-11!42;CL:0002539!5.68e-09!10;CL:0000187!9.77e-09!54;CL:1000413!1.84e-08!9;CL:0000183!9.21e-08!59;CL:0000680!1.24e-07!57;CL:0000056!1.24e-07!57;CL:0000355!1.24e-07!57;CL:0000393!4.92e-07!60;CL:0000211!4.92e-07!60;CL:0002494!6.01e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.00e-23;24!CL:0000359;4.28e-18;32!CL:0000071;1.43e-17;18!CL:0000115;1.72e-17;36!CL:0002539;2.20e-10;10!CL:0002078;4.55e-10;45!CL:1000413;8.79e-10;9!CL:0000213;1.06e-09;58!CL:0000215;1.06e-09;58!CL:0000192;6.32e-09;43!CL:0002494;3.37e-08;16!CL:0002544;3.96e-07;6!CL:0002138;4.19e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.30e-23,24;CL:0000222,8.80e-21,121;CL:0000115,1.40e-20,36;CL:0000359,5.03e-19,32;CL:0000071,1.49e-17,18;CL:0002546,1.49e-17,18;CL:0000213,1.07e-15,58;CL:0000215,1.07e-15,58;CL:0002078,7.35e-15,45;CL:0000192,2.37e-11,43;CL:0000514,2.37e-11,43;CL:0002539,2.21e-10,10;CL:1000413,8.96e-10,9;CL:0002494,4.20e-08,16;CL:0000187,5.43e-08,55;CL:0002544,4.01e-07,6;CL:0000680,4.26e-07,58;CL:0000056,4.26e-07,58;CL:0000355,4.26e-07,58;CL:0005020,4.31e-07,6;CL:0002138,4.31e-07,6;CL:0005022,4.31e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.43e-17;18!CL:0000514;6.32e-09;43!CL:0005022;4.19e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.47e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.49e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001009!8.90e-47!113;UBERON:0004535!1.85e-45!110;UBERON:0004872!3.55e-43!84;UBERON:0000055!1.08e-41!69;UBERON:0001981!5.57e-39!60;UBERON:0007500!5.57e-39!60;UBERON:0004537!5.57e-39!60;UBERON:0006965!5.57e-39!60;UBERON:0002049!5.68e-36!79;UBERON:0007798!5.68e-36!79;UBERON:0001637!2.40e-30!42;UBERON:0003509!2.40e-30!42;UBERON:0004572!2.40e-30!42;UBERON:0007023!5.77e-29!115;UBERON:0003914!3.01e-27!118;UBERON:0000025!9.25e-26!194;UBERON:0004573!5.43e-25!33;UBERON:0004571!5.43e-25!33;UBERON:0004111!1.37e-24!241;UBERON:0000477!1.22e-20!286;UBERON:0000947!3.38e-16!21;UBERON:0010191!3.38e-16!21;UBERON:0001986!5.36e-15!18;UBERON:0004638!5.36e-15!18;UBERON:0004852!5.36e-15!18;UBERON:0000483!8.60e-13!309;UBERON:0003081!1.90e-12!216;UBERON:0000490!2.00e-12!138;UBERON:0000487!2.20e-12!22;UBERON:0000119!3.05e-12!312;UBERON:0007100!5.46e-12!27;UBERON:0000948!6.62e-11!24;UBERON:0005498!6.62e-11!24;UBERON:0004140!6.62e-11!24;UBERON:0009881!6.62e-11!24;UBERON:0004141!6.62e-11!24;UBERON:0003084!6.62e-11!24;UBERON:0007005!6.62e-11!24;UBERON:0004139!6.62e-11!24;UBERON:0004291!6.62e-11!24;UBERON:0006914!1.35e-10!25;UBERON:0002385!1.63e-09!63;UBERON:0001015!1.63e-09!63;UBERON:0000383!1.63e-09!63;UBERON:0001134!5.53e-09!61;UBERON:0002036!5.53e-09!61;UBERON:0003082!5.53e-09!61;UBERON:0004237!5.68e-09!10;UBERON:0004695!5.68e-09!10;UBERON:0002111!5.68e-09!10;UBERON:0004178!5.68e-09!10;UBERON:0003915!1.84e-08!9;UBERON:0004700!1.84e-08!9;UBERON:0001917!1.84e-08!9;UBERON:0000468!6.17e-08!659;UBERON:0003513!2.05e-07!8;UBERON:0001135!3.46e-07!15;UBERON:0000467!4.35e-07!625;UBERON:0004290!4.43e-07!70;UBERON:0000480!5.66e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.82e-27;33!UBERON:0004571;6.82e-27;33!UBERON:0001637;4.45e-26;42!UBERON:0003509;4.45e-26;42!UBERON:0004572;4.45e-26;42!UBERON:0007500;4.50e-23;56!UBERON:0001981;4.50e-23;56!UBERON:0004537;4.50e-23;56!UBERON:0000055;8.13e-22;65!UBERON:0000947;5.42e-19;21!UBERON:0010191;5.42e-19;21!UBERON:0004638;1.43e-17;18!UBERON:0001986;1.43e-17;18!UBERON:0004852;1.43e-17;18!UBERON:0000487;6.46e-15;22!UBERON:0002049;9.55e-15;75!UBERON:0007798;9.55e-15;75!UBERON:0004535;4.35e-14;109!UBERON:0003914;3.00e-13;74!UBERON:0001009;3.12e-13;112!UBERON:0007100;6.69e-13;25!UBERON:0006914;3.55e-12;25!UBERON:0000948;1.12e-11;22!UBERON:0004237;2.20e-10;10!UBERON:0004695;2.20e-10;10!UBERON:0002111;2.20e-10;10!UBERON:0004178;2.20e-10;10!UBERON:0003915;8.79e-10;9!UBERON:0004700;8.79e-10;9!UBERON:0001917;8.79e-10;9!UBERON:0000490;1.88e-08;33!UBERON:0000025;2.04e-08;93!UBERON:0001135;8.59e-08;15!UBERON:0003513;1.09e-07;7 | |||
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| ||
|short_description=p2@MYCT1 | |||
}} | }} |
Latest revision as of 07:11, 16 September 2015
Short description: | p2@MYCT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYCT1_5end |
Coexpression cluster: | C1376_Endothelial_adipose_Lymphatic_Aortic_Smooth_breast_Hepatic |
Association with transcript: | 0bp_to_ENST00000367245, ENST00000529453, NM_025107, uc003qpc.3, uc003qpd.3, uc010kjc.1_5end |
EntrezGene: | MYCT1 |
HGNC: | 23172 |
UniProt: | Q8N699E9PQ55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.30e-23 | 24 |
mesodermal cell | 8.80e-21 | 121 |
endothelial cell | 1.40e-20 | 36 |
vascular associated smooth muscle cell | 5.03e-19 | 32 |
blood vessel endothelial cell | 1.49e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.49e-17 | 18 |
lining cell | 1.07e-15 | 58 |
barrier cell | 1.07e-15 | 58 |
meso-epithelial cell | 7.35e-15 | 45 |
smooth muscle cell | 2.37e-11 | 43 |
smooth muscle myoblast | 2.37e-11 | 43 |
aortic smooth muscle cell | 2.21e-10 | 10 |
endothelial cell of artery | 8.96e-10 | 9 |
cardiocyte | 4.20e-08 | 16 |
muscle cell | 5.43e-08 | 55 |
aortic endothelial cell | 4.01e-07 | 6 |
muscle precursor cell | 4.26e-07 | 58 |
myoblast | 4.26e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.26e-07 | 58 |
lymphangioblast | 4.31e-07 | 6 |
endothelial cell of lymphatic vessel | 4.31e-07 | 6 |
vascular lymphangioblast | 4.31e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.49e-07 | 14 |