FFCP PHASE1:Hg19::chr3:157824156..157824164,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6474 | |EntrezGene=6474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10854 | |HGNC=10854 | ||
|TSSclassifier=strong | |||
|UniProt=O60902 | |UniProt=O60902 | ||
|association_with_transcript=127bp_to_ENST00000389589_5end | |association_with_transcript=127bp_to_ENST00000389589_5end | ||
|cluster_id=chr3:157824156..157824164,- | |||
|coexpression_cluster_id=C126 | |||
|description=CAGE_peak_4_at_SHOX2_5end | |description=CAGE_peak_4_at_SHOX2_5end | ||
|id=chr3:157824156..157824164,- | |id=chr3:157824156..157824164,- | ||
|ontology_enrichment_celltype=CL:0002620!2.79e-08!23 | |ontology_enrichment_celltype=CL:0002620!2.79e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.54e-23;2!CL:0000242;8.54e-23;2!CL:0000312;1.06e-09;5!CL:0000240;3.13e-08;6!CL:0000311;3.13e-08;6!CL:0000079;3.13e-08;6!CL:0000237;3.13e-08;6!CL:0002535;4.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.89e-23,2;CL:0000312,8.49e-10,5;CL:0000240,2.61e-08,6;CL:0000311,2.61e-08,6;CL:0000079,2.61e-08,6;CL:0000237,2.61e-08,6;CL:0000036,2.61e-08,6;CL:0000357,2.61e-08,6;CL:0000114,2.61e-08,6;CL:0002535,4.83e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.05e-12;1!UBERON:0003852;1.05e-12;1!CL:0000357;3.13e-08;6!CL:0000114;3.13e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!1.28e-07!45;UBERON:0002416!1.28e-07!45;UBERON:0002097!3.95e-07!40 | |ontology_enrichment_uberon=UBERON:0002199!1.28e-07!45;UBERON:0002416!1.28e-07!45;UBERON:0002097!3.95e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0005705;1.05e-12;1!UBERON:0008193;1.05e-12;1!UBERON:0010912;1.05e-12;1!UBERON:0002514;1.05e-12;1!UBERON:0003457;1.05e-12;1!UBERON:0008907;1.05e-12;1!UBERON:0008001;1.05e-12;1!UBERON:0007213;1.05e-12;1!UBERON:0009891;1.05e-12;1!UBERON:0007914;1.05e-12;1!UBERON:0007375;1.05e-12;1!UBERON:0003323;1.05e-12;1!UBERON:0010258;1.05e-12;1!UBERON:0005253;1.05e-12;1!UBERON:0007842;1.05e-12;1!UBERON:0002397;1.05e-12;1!UBERON:0003113;1.05e-12;1!UBERON:0003277;1.05e-12;1!UBERON:0001709;1.05e-12;1!UBERON:0002244;1.05e-12;1!UBERON:0005620;1.05e-12;1!UBERON:0010364;1.05e-12;1!UBERON:0004288;1.05e-12;1!UBERON:0002331;1.49e-10;10!UBERON:0000178;3.32e-07;15!UBERON:0000179;3.32e-07;15!UBERON:0000463;3.32e-07;15!UBERON:0006955;4.82e-07;2!UBERON:0004801;4.82e-07;2!UBERON:0004089;5.57e-07;2!UBERON:0001905;9.01e-07;2!UBERON:0002148;9.01e-07;2!UBERON:0002757;9.01e-07;2!UBERON:0010134;9.01e-07;2!UBERON:0006331;9.01e-07;2!UBERON:0009662;9.01e-07;2!UBERON:0005408;9.01e-07;2!UBERON:0001899;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,1.11e-12,1;UBERON:0008193,1.11e-12,1;UBERON:0010912,1.11e-12,1;UBERON:0002514,1.11e-12,1;UBERON:0003457,1.11e-12,1;UBERON:0008907,1.11e-12,1;UBERON:0008001,1.11e-12,1;UBERON:0007213,1.11e-12,1;UBERON:0009891,1.11e-12,1;UBERON:0007914,1.11e-12,1;UBERON:0009292,1.11e-12,1;UBERON:0003099,1.11e-12,1;UBERON:0007375,1.11e-12,1;UBERON:0003323,1.11e-12,1;UBERON:0010258,1.11e-12,1;UBERON:0007842,1.11e-12,1;UBERON:0009494,1.11e-12,1;UBERON:0010042,1.11e-12,1;UBERON:0010045,1.11e-12,1;UBERON:0010259,1.11e-12,1;UBERON:0010359,1.11e-12,1;UBERON:0009526,1.11e-12,1;UBERON:0002397,1.11e-12,1;UBERON:0003113,1.11e-12,1;UBERON:0003277,1.11e-12,1;UBERON:0001709,1.11e-12,1;UBERON:0004066,1.11e-12,1;UBERON:0002244,1.11e-12,1;UBERON:0005620,1.11e-12,1;UBERON:0004362,1.11e-12,1;UBERON:0010364,1.11e-12,1;UBERON:0010046,1.11e-12,1;UBERON:0005868,1.11e-12,1;UBERON:0007238,1.11e-12,1;UBERON:0004288,1.11e-12,1;UBERON:0004068,1.11e-12,1;UBERON:0010334,1.11e-12,1;UBERON:0003852,1.11e-12,1;UBERON:0010253,1.11e-12,1;UBERON:0002331,1.09e-10,10;UBERON:0000358,1.09e-10,10;UBERON:0000307,1.09e-10,10;UBERON:0000091,1.09e-10,10;UBERON:0000087,1.09e-10,10;UBERON:0007010,1.09e-10,10;UBERON:0007806,1.09e-10,10;UBERON:0008780,1.09e-10,10;UBERON:0005728,1.09e-10,10;UBERON:0000178,2.71e-07,15;UBERON:0000179,2.71e-07,15;UBERON:0000463,2.71e-07,15;UBERON:0006955,4.83e-07,2;UBERON:0004801,4.83e-07,2;UBERON:0005253,5.73e-07,2;UBERON:0004089,5.73e-07,2;UBERON:0002148,8.52e-07,2;UBERON:0006331,8.52e-07,2;UBERON:0009662,8.52e-07,2 | |||
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| ||
|short_description=p4@SHOX2 | |short_description=p4@SHOX2 | ||
}} | }} |
Latest revision as of 08:16, 16 September 2015
Short description: | p4@SHOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SHOX2_5end |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | 127bp_to_ENST00000389589_5end |
EntrezGene: | SHOX2 |
HGNC: | 10854 |
UniProt: | O60902 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.89e-23 | 2 |
keratinocyte | 8.49e-10 | 5 |
stratified squamous epithelial cell | 2.61e-08 | 6 |
keratin accumulating cell | 2.61e-08 | 6 |
stratified epithelial cell | 2.61e-08 | 6 |
keratinizing barrier epithelial cell | 2.61e-08 | 6 |
epithelial fate stem cell | 2.61e-08 | 6 |
stratified epithelial stem cell | 2.61e-08 | 6 |
surface ectodermal cell | 2.61e-08 | 6 |
epithelial cell of cervix | 4.83e-07 | 2 |