FFCP PHASE1:Hg19::chr12:112037136..112037151,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6311 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10555 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-56bp_to_ENST00000483311_5end | |||
|cluster_id=chr12:112037136..112037151,- | |||
|description=CAGE_peak_2_at_ATXN2_5end | |||
|id=chr12:112037136..112037151,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.28e-28!115;UBERON:0001049!2.40e-15!57;UBERON:0005068!2.40e-15!57;UBERON:0006241!2.40e-15!57;UBERON:0007135!2.40e-15!57;UBERON:0002346!5.75e-13!90;UBERON:0003075!1.62e-12!86;UBERON:0007284!1.62e-12!86;UBERON:0003080!1.73e-12!42;UBERON:0000955!2.41e-12!69;UBERON:0006238!2.41e-12!69;UBERON:0002780!6.71e-12!41;UBERON:0001890!6.71e-12!41;UBERON:0006240!6.71e-12!41;UBERON:0000073!7.77e-12!94;UBERON:0001016!7.77e-12!94;UBERON:0002616!8.22e-12!59;UBERON:0001017!2.97e-11!82;UBERON:0005743!8.49e-11!86;UBERON:0001893!8.98e-11!34;UBERON:0002020!1.65e-10!34;UBERON:0003528!1.65e-10!34;UBERON:0002791!2.82e-10!33;UBERON:0001869!5.16e-10!32;UBERON:0003056!7.36e-09!61;UBERON:0000924!5.44e-08!173;UBERON:0006601!5.44e-08!173;UBERON:0000956!6.28e-08!25;UBERON:0000203!6.28e-08!25;UBERON:0000153!8.13e-08!129;UBERON:0007811!8.13e-08!129;UBERON:0004111!1.28e-07!241;UBERON:0004121!1.37e-07!169;UBERON:0000025!2.00e-07!194;UBERON:0000033!2.32e-07!123;UBERON:0002619!3.29e-07!22;UBERON:0000119!4.90e-07!312;UBERON:0000475!4.98e-07!365;UBERON:0000483!5.04e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.77e-09;41!UBERON:0001890;1.77e-09;41!UBERON:0001893;2.52e-09;34!UBERON:0003528;2.99e-09;34!UBERON:0002020;2.99e-09;34!UBERON:0001869;3.72e-09;32!UBERON:0002791;6.17e-09;32!UBERON:0000073;9.53e-09;53!UBERON:0002616;9.53e-09;53!UBERON:0000956;3.25e-08;25!UBERON:0000203;3.25e-08;25!UBERON:0007023;3.61e-08;114!UBERON:0002619;1.85e-07;22!UBERON:0001950;9.97e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.63e-28,114;UBERON:0001049,6.93e-15,56;UBERON:0005068,6.93e-15,56;UBERON:0006241,6.93e-15,56;UBERON:0007135,6.93e-15,56;UBERON:0000073,1.61e-13,53;UBERON:0002616,1.61e-13,53;UBERON:0002346,1.42e-12,86;UBERON:0003075,3.98e-12,82;UBERON:0007284,3.98e-12,82;UBERON:0001016,5.42e-12,89;UBERON:0000955,6.30e-12,68;UBERON:0006238,6.30e-12,68;UBERON:0002780,6.53e-12,41;UBERON:0001890,6.53e-12,41;UBERON:0003080,6.53e-12,41;UBERON:0006240,6.53e-12,41;UBERON:0001017,5.90e-11,81;UBERON:0001893,8.87e-11,34;UBERON:0003528,1.63e-10,34;UBERON:0002020,1.63e-10,34;UBERON:0001869,5.12e-10,32;UBERON:0002791,9.16e-10,32;UBERON:0010371,1.55e-09,104;UBERON:0010314,3.73e-09,132;UBERON:0003056,9.61e-09,61;UBERON:0000956,6.37e-08,25;UBERON:0000203,6.37e-08,25;UBERON:0004121,2.43e-07,171;UBERON:0000924,2.43e-07,171;UBERON:0006601,2.43e-07,171;UBERON:0004111,2.49e-07,240;UBERON:0011216,3.25e-07,223;UBERON:0002619,3.36e-07,22;UBERON:0000025,3.75e-07,192 | |||
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| |||
|short_description=p2@ATXN2 | |||
}} |
Latest revision as of 10:11, 16 September 2015
Short description: | p2@ATXN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATXN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -56bp_to_ENST00000483311_5end |
EntrezGene: | ATXN2 |
HGNC: | 10555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data