FFCP PHASE1:Hg19::chr13:108870714..108870780,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:108870714..108870780,+ to FFCP PHASE1:Hg19::chr13:108870714..108870780,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84945 | |EntrezGene=84945 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20293 | |HGNC=20293 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L211 | |UniProt=Q7L211 | ||
|association_with_transcript=0bp_to_ENST00000375898,NM_032859,uc001vqq.2_5end | |||
|cluster_id=chr13:108870714..108870780,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_2_at_ABHD13_5end | |||
|id=chr13:108870714..108870780,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.79e-29!140;CL:0000766!1.97e-28!76;CL:0000839!1.20e-23!70;CL:0000557!1.28e-23!71;CL:0002057!1.90e-23!42;CL:0002087!3.38e-23!119;CL:0002194!3.72e-23!63;CL:0000576!3.72e-23!63;CL:0000040!3.72e-23!63;CL:0000559!3.72e-23!63;CL:0002031!4.85e-23!124;CL:0002009!1.54e-22!65;CL:0000037!9.07e-22!172;CL:0000566!9.07e-22!172;CL:0002032!1.54e-20!165;CL:0000837!1.54e-20!165;CL:0000860!4.76e-19!45;CL:0000763!1.68e-18!112;CL:0000049!1.68e-18!112;CL:0000988!2.65e-18!182;CL:0000791!2.31e-07!18;CL:0000789!2.31e-07!18;CL:0002420!2.31e-07!18;CL:0002419!2.31e-07!18;CL:0000790!2.31e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.98e-18;33!CL:0002057;8.98e-18;33!CL:0000473;4.68e-17;39!CL:0000234;4.68e-17;39!CL:0000576;7.69e-16;48!CL:0000766;1.03e-13;69!CL:0002087;7.50e-08;104!CL:0000738;1.19e-07;136!CL:0000791;2.38e-07;18!CL:0000789;2.38e-07;18!CL:0002419;2.38e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.28e-32,72;CL:0000738,2.59e-32,136;CL:0000839,1.47e-27,66;CL:0000557,1.74e-27,67;CL:0002194,2.60e-27,59;CL:0000576,2.60e-27,59;CL:0000040,2.60e-27,59;CL:0000559,2.60e-27,59;CL:0002009,1.59e-26,61;CL:0000473,6.00e-26,48;CL:0000234,6.00e-26,48;CL:0002087,6.77e-26,115;CL:0002031,1.17e-25,120;CL:0000037,7.75e-24,168;CL:0000860,1.90e-23,42;CL:0002057,1.90e-23,42;CL:0002032,1.39e-22,161;CL:0000837,1.39e-22,161;CL:0000763,6.41e-21,108;CL:0000049,6.41e-21,108;CL:0000988,3.25e-20,177;CL:0000134,1.99e-07,354;CL:0000791,2.31e-07,18;CL:0000789,2.31e-07,18;CL:0002420,2.31e-07,18;CL:0002419,2.31e-07,18;CL:0000790,2.31e-07,18;CL:0002320,4.08e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;5.05e-17;42!CL:0000790;2.38e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.33e-23!102;UBERON:0003061!1.33e-23!102;UBERON:0007023!4.17e-22!115;UBERON:0002193!1.47e-21!112;UBERON:0002371!5.47e-19!80;UBERON:0001474!9.22e-18!86;UBERON:0004765!2.89e-16!101;UBERON:0001434!2.89e-16!101;UBERON:0002405!2.55e-13!115;UBERON:0002616!4.33e-09!59;UBERON:0003080!7.63e-09!42;UBERON:0001049!1.41e-08!57;UBERON:0005068!1.41e-08!57;UBERON:0006241!1.41e-08!57;UBERON:0007135!1.41e-08!57;UBERON:0002780!1.45e-08!41;UBERON:0001890!1.45e-08!41;UBERON:0006240!1.45e-08!41;UBERON:0002619!2.37e-08!22;UBERON:0001950!1.26e-07!20;UBERON:0003081!1.29e-07!216;UBERON:0001869!2.21e-07!32;UBERON:0002020!3.69e-07!34;UBERON:0003528!3.69e-07!34;UBERON:0001893!4.37e-07!34;UBERON:0002791!7.97e-07!33;UBERON:0000955!9.29e-07!69;UBERON:0006238!9.29e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.20e-08;22!UBERON:0001950;1.17e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-26,98;UBERON:0003061,1.28e-26,98;UBERON:0002193,3.12e-24,108;UBERON:0002371,4.66e-22,76;UBERON:0007023,9.87e-22,114;UBERON:0002405,1.30e-20,93;UBERON:0001474,1.48e-20,82;UBERON:0004765,7.41e-20,90;UBERON:0001434,2.28e-18,100;UBERON:0003081,1.39e-10,203;UBERON:0002780,1.45e-08,41;UBERON:0001890,1.45e-08,41;UBERON:0003080,1.45e-08,41;UBERON:0006240,1.45e-08,41;UBERON:0002619,2.37e-08,22;UBERON:0001049,2.57e-08,56;UBERON:0005068,2.57e-08,56;UBERON:0006241,2.57e-08,56;UBERON:0007135,2.57e-08,56;UBERON:0000073,3.37e-08,53;UBERON:0002616,3.37e-08,53;UBERON:0001950,1.26e-07,20;UBERON:0001869,2.21e-07,32;UBERON:0002791,3.65e-07,32;UBERON:0003528,3.69e-07,34;UBERON:0002020,3.69e-07,34;UBERON:0001893,4.37e-07,34;UBERON:0002204,7.05e-07,167;UBERON:0002384,9.36e-07,371 | |||
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| ||
|short_description=p2@ABHD13 | |||
}} | }} |
Latest revision as of 10:59, 16 September 2015
Short description: | p2@ABHD13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABHD13_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000375898, NM_032859, uc001vqq.2_5end |
EntrezGene: | ABHD13 |
HGNC: | 20293 |
UniProt: | Q7L211 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.28e-32 | 72 |
leukocyte | 2.59e-32 | 136 |
myeloid lineage restricted progenitor cell | 1.47e-27 | 66 |
granulocyte monocyte progenitor cell | 1.74e-27 | 67 |
monopoietic cell | 2.60e-27 | 59 |
monocyte | 2.60e-27 | 59 |
monoblast | 2.60e-27 | 59 |
promonocyte | 2.60e-27 | 59 |
macrophage dendritic cell progenitor | 1.59e-26 | 61 |
defensive cell | 6.00e-26 | 48 |
phagocyte | 6.00e-26 | 48 |
nongranular leukocyte | 6.77e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 1.17e-25 | 120 |
hematopoietic stem cell | 7.75e-24 | 168 |
classical monocyte | 1.90e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.90e-23 | 42 |
hematopoietic oligopotent progenitor cell | 1.39e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.39e-22 | 161 |
myeloid cell | 6.41e-21 | 108 |
common myeloid progenitor | 6.41e-21 | 108 |
hematopoietic cell | 3.25e-20 | 177 |
mesenchymal cell | 1.99e-07 | 354 |
mature alpha-beta T cell | 2.31e-07 | 18 |
alpha-beta T cell | 2.31e-07 | 18 |
immature T cell | 2.31e-07 | 18 |
mature T cell | 2.31e-07 | 18 |
immature alpha-beta T cell | 2.31e-07 | 18 |
connective tissue cell | 4.08e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.28e-26 | 98 |
blood island | 1.28e-26 | 98 |
hemolymphoid system | 3.12e-24 | 108 |
bone marrow | 4.66e-22 | 76 |
adult organism | 9.87e-22 | 114 |
immune system | 1.30e-20 | 93 |
bone element | 1.48e-20 | 82 |
skeletal element | 7.41e-20 | 90 |
skeletal system | 2.28e-18 | 100 |
lateral plate mesoderm | 1.39e-10 | 203 |
regional part of forebrain | 1.45e-08 | 41 |
forebrain | 1.45e-08 | 41 |
anterior neural tube | 1.45e-08 | 41 |
future forebrain | 1.45e-08 | 41 |
regional part of cerebral cortex | 2.37e-08 | 22 |
neural tube | 2.57e-08 | 56 |
neural rod | 2.57e-08 | 56 |
future spinal cord | 2.57e-08 | 56 |
neural keel | 2.57e-08 | 56 |
regional part of nervous system | 3.37e-08 | 53 |
regional part of brain | 3.37e-08 | 53 |
neocortex | 1.26e-07 | 20 |
cerebral hemisphere | 2.21e-07 | 32 |
regional part of telencephalon | 3.65e-07 | 32 |
brain grey matter | 3.69e-07 | 34 |
gray matter | 3.69e-07 | 34 |
telencephalon | 4.37e-07 | 34 |
musculoskeletal system | 7.05e-07 | 167 |
connective tissue | 9.36e-07 | 371 |