FFCP PHASE1:Hg19::chr16:31271243..31271270,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3684 | |EntrezGene=3684 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6149 | |HGNC=6149 | ||
|TSSclassifier=strong | |||
|UniProt=P11215 | |UniProt=P11215 | ||
|association_with_transcript=-17bp_to_ENST00000287497,ENST00000544665,NM_000632,NM_001145808,uc002ebq.2,uc002ebr.2_5end | |association_with_transcript=-17bp_to_ENST00000287497,ENST00000544665,NM_000632,NM_001145808,uc002ebq.2,uc002ebr.2_5end | ||
|cluster_id=chr16:31271243..31271270,+ | |||
|coexpression_cluster_id=C239 | |coexpression_cluster_id=C239 | ||
|description=CAGE_peak_3_at_ITGAM_5end | |description=CAGE_peak_3_at_ITGAM_5end | ||
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|ontology_enrichment_development_v019=CL:0000790;4.42e-25;18 | |ontology_enrichment_development_v019=CL:0000790;4.42e-25;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.24e-47!102;UBERON:0003061!3.24e-47!102;UBERON:0002193!3.37e-42!112;UBERON:0002371!7.42e-32!80;UBERON:0001474!2.33e-28!86;UBERON:0002405!1.78e-23!115;UBERON:0004765!1.82e-22!101;UBERON:0001434!1.82e-22!101;UBERON:0000178!5.74e-14!15;UBERON:0000179!5.74e-14!15;UBERON:0000463!5.74e-14!15;UBERON:0003081!1.21e-13!216;UBERON:0002384!1.88e-09!375;UBERON:0002204!2.42e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!3.24e-47!102;UBERON:0003061!3.24e-47!102;UBERON:0002193!3.37e-42!112;UBERON:0002371!7.42e-32!80;UBERON:0001474!2.33e-28!86;UBERON:0002405!1.78e-23!115;UBERON:0004765!1.82e-22!101;UBERON:0001434!1.82e-22!101;UBERON:0000178!5.74e-14!15;UBERON:0000179!5.74e-14!15;UBERON:0000463!5.74e-14!15;UBERON:0003081!1.21e-13!216;UBERON:0002384!1.88e-09!375;UBERON:0002204!2.42e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.88e-27;15!UBERON:0000179;6.88e-27;15!UBERON:0000463;6.88e-27;15!UBERON:0002390;2.30e-14;32!UBERON:0002193;1.32e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;6.88e-27;15!UBERON:0000179;6.88e-27;15!UBERON:0000463;6.88e-27;15!UBERON:0002390;2.30e-14;32!UBERON:0002193;1.32e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.04e-28,98;UBERON:0003061,4.04e-28,98;UBERON:0000178,5.86e-27,15;UBERON:0000179,5.86e-27,15;UBERON:0000463,5.86e-27,15;UBERON:0002193,1.14e-24,108;UBERON:0002371,8.19e-12,76;UBERON:0002405,8.35e-11,93;UBERON:0001474,1.40e-10,82;UBERON:0004765,3.37e-09,90;UBERON:0003081,4.90e-09,203;UBERON:0001434,8.51e-08,100;UBERON:0002384,5.17e-07,371 | |||
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|short_description=p3@ITGAM | |short_description=p3@ITGAM | ||
}} | }} |
Latest revision as of 12:01, 16 September 2015
Short description: | p3@ITGAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITGAM_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | -17bp_to_ENST00000287497, ENST00000544665, NM_000632, NM_001145808, uc002ebq.2, uc002ebr.2_5end |
EntrezGene: | ITGAM |
HGNC: | 6149 |
UniProt: | P11215 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.04e-28 | 98 |
blood island | 4.04e-28 | 98 |
blood | 5.86e-27 | 15 |
haemolymphatic fluid | 5.86e-27 | 15 |
organism substance | 5.86e-27 | 15 |
hemolymphoid system | 1.14e-24 | 108 |
bone marrow | 8.19e-12 | 76 |
immune system | 8.35e-11 | 93 |
bone element | 1.40e-10 | 82 |
skeletal element | 3.37e-09 | 90 |
lateral plate mesoderm | 4.90e-09 | 203 |
skeletal system | 8.51e-08 | 100 |
connective tissue | 5.17e-07 | 371 |