FFCP PHASE1:Hg19::chr16:31366486..31366531,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3687 | |EntrezGene=3687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6152 | |HGNC=6152 | ||
|TSSclassifier=strong | |||
|UniProt=P20702,Q8TES5 | |UniProt=P20702,Q8TES5 | ||
|association_with_transcript=0bp_to_ENST00000268296,NM_000887,uc002ebt.2,uc002ebu.1,uc010cao.1_5end | |association_with_transcript=0bp_to_ENST00000268296,NM_000887,uc002ebt.2,uc002ebu.1,uc010cao.1_5end | ||
|cluster_id=chr16:31366486..31366531,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_ITGAX_5end | |description=CAGE_peak_1_at_ITGAX_5end | ||
|id=chr16:31366486..31366531,+ | |id=chr16:31366486..31366531,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.58e-44!140;CL:0000037!8.17e-44!172;CL:0000566!8.17e-44!172;CL:0002032!9.75e-42!165;CL:0000837!9.75e-42!165;CL:0000988!3.52e-41!182;CL:0000766!5.91e-40!76;CL:0002031!1.99e-38!124;CL:0000763!1.51e-36!112;CL:0000049!1.51e-36!112;CL:0000557!1.01e-35!71;CL:0002087!1.84e-35!119;CL:0000839!3.12e-34!70;CL:0002009!1.29e-32!65;CL:0002194!1.23e-31!63;CL:0000576!1.23e-31!63;CL:0000040!1.23e-31!63;CL:0000559!1.23e-31!63;CL:0002057!1.03e-28!42;CL:0000860!2.91e-25!45;CL:0000094!9.59e-07!8 | |ontology_enrichment_celltype=CL:0000738!2.58e-44!140;CL:0000037!8.17e-44!172;CL:0000566!8.17e-44!172;CL:0002032!9.75e-42!165;CL:0000837!9.75e-42!165;CL:0000988!3.52e-41!182;CL:0000766!5.91e-40!76;CL:0002031!1.99e-38!124;CL:0000763!1.51e-36!112;CL:0000049!1.51e-36!112;CL:0000557!1.01e-35!71;CL:0002087!1.84e-35!119;CL:0000839!3.12e-34!70;CL:0002009!1.29e-32!65;CL:0002194!1.23e-31!63;CL:0000576!1.23e-31!63;CL:0000040!1.23e-31!63;CL:0000559!1.23e-31!63;CL:0002057!1.03e-28!42;CL:0000860!2.91e-25!45;CL:0000094!9.59e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.71e-24;33!CL:0002057;2.71e-24;33!CL:0000473;6.17e-24;39!CL:0000234;6.17e-24;39!CL:0000576;2.08e-22;48!CL:0000766;5.84e-21;69!CL:0000763;2.76e-13;100!CL:0002087;3.81e-12;104!CL:0000738;5.71e-12;136!CL:0000988;7.42e-09;177!CL:0000094;1.78e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.79e-51,136;CL:0000766,1.03e-50,72;CL:0000037,3.32e-49,168;CL:0000988,9.45e-47,177;CL:0002032,1.11e-46,161;CL:0000837,1.11e-46,161;CL:0002031,8.34e-46,120;CL:0000557,9.98e-46,67;CL:0000839,6.33e-44,66;CL:0002087,1.52e-42,115;CL:0000763,3.32e-42,108;CL:0000049,3.32e-42,108;CL:0002009,3.44e-42,61;CL:0002194,4.40e-41,59;CL:0000576,4.40e-41,59;CL:0000040,4.40e-41,59;CL:0000559,4.40e-41,59;CL:0000473,6.56e-37,48;CL:0000234,6.56e-37,48;CL:0000860,1.63e-32,42;CL:0002057,1.63e-32,42;CL:0000094,1.80e-07,8;CL:0002393,2.72e-07,9;CL:0002397,2.72e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.67e-23;42!CL:0000049;8.86e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.14e-38!102;UBERON:0003061!2.14e-38!102;UBERON:0002193!1.77e-36!112;UBERON:0007023!1.17e-30!115;UBERON:0002371!1.75e-28!80;UBERON:0001474!3.80e-24!86;UBERON:0002405!1.45e-22!115;UBERON:0004765!4.02e-17!101;UBERON:0001434!4.02e-17!101;UBERON:0001049!3.46e-10!57;UBERON:0005068!3.46e-10!57;UBERON:0006241!3.46e-10!57;UBERON:0007135!3.46e-10!57;UBERON:0003081!3.78e-10!216;UBERON:0000178!2.79e-09!15;UBERON:0000179!2.79e-09!15;UBERON:0000463!2.79e-09!15;UBERON:0003080!3.35e-08!42;UBERON:0002780!4.44e-08!41;UBERON:0001890!4.44e-08!41;UBERON:0006240!4.44e-08!41;UBERON:0002616!3.29e-07!59 | |ontology_enrichment_uberon=UBERON:0002390!2.14e-38!102;UBERON:0003061!2.14e-38!102;UBERON:0002193!1.77e-36!112;UBERON:0007023!1.17e-30!115;UBERON:0002371!1.75e-28!80;UBERON:0001474!3.80e-24!86;UBERON:0002405!1.45e-22!115;UBERON:0004765!4.02e-17!101;UBERON:0001434!4.02e-17!101;UBERON:0001049!3.46e-10!57;UBERON:0005068!3.46e-10!57;UBERON:0006241!3.46e-10!57;UBERON:0007135!3.46e-10!57;UBERON:0003081!3.78e-10!216;UBERON:0000178!2.79e-09!15;UBERON:0000179!2.79e-09!15;UBERON:0000463!2.79e-09!15;UBERON:0003080!3.35e-08!42;UBERON:0002780!4.44e-08!41;UBERON:0001890!4.44e-08!41;UBERON:0006240!4.44e-08!41;UBERON:0002616!3.29e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.29e-10;15!UBERON:0000179;2.29e-10;15!UBERON:0000463;2.29e-10;15!UBERON:0007023;1.39e-09;114!UBERON:0002780;8.39e-07;41!UBERON:0001890;8.39e-07;41 | |||
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| ||
|short_description=p1@ITGAX | |short_description=p1@ITGAX | ||
}} | }} |
Latest revision as of 12:14, 16 September 2015
Short description: | p1@ITGAX |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITGAX_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000268296, NM_000887, uc002ebt.2, uc002ebu.1, uc010cao.1_5end |
EntrezGene: | ITGAX |
HGNC: | 6152 |
UniProt: | P20702Q8TES5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.79e-51 | 136 |
myeloid leukocyte | 1.03e-50 | 72 |
hematopoietic stem cell | 3.32e-49 | 168 |
hematopoietic cell | 9.45e-47 | 177 |
hematopoietic oligopotent progenitor cell | 1.11e-46 | 161 |
hematopoietic multipotent progenitor cell | 1.11e-46 | 161 |
hematopoietic lineage restricted progenitor cell | 8.34e-46 | 120 |
granulocyte monocyte progenitor cell | 9.98e-46 | 67 |
myeloid lineage restricted progenitor cell | 6.33e-44 | 66 |
nongranular leukocyte | 1.52e-42 | 115 |
myeloid cell | 3.32e-42 | 108 |
common myeloid progenitor | 3.32e-42 | 108 |
macrophage dendritic cell progenitor | 3.44e-42 | 61 |
monopoietic cell | 4.40e-41 | 59 |
monocyte | 4.40e-41 | 59 |
monoblast | 4.40e-41 | 59 |
promonocyte | 4.40e-41 | 59 |
defensive cell | 6.56e-37 | 48 |
phagocyte | 6.56e-37 | 48 |
classical monocyte | 1.63e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.63e-32 | 42 |
granulocyte | 1.80e-07 | 8 |
intermediate monocyte | 2.72e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.72e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.62e-48 | 98 |
blood island | 3.62e-48 | 98 |
hemolymphoid system | 1.47e-44 | 108 |
bone marrow | 9.31e-38 | 76 |
immune system | 6.17e-35 | 93 |
adult organism | 8.74e-35 | 114 |
bone element | 2.19e-32 | 82 |
skeletal element | 1.82e-26 | 90 |
skeletal system | 4.93e-22 | 100 |
lateral plate mesoderm | 7.87e-14 | 203 |
neural tube | 2.19e-11 | 56 |
neural rod | 2.19e-11 | 56 |
future spinal cord | 2.19e-11 | 56 |
neural keel | 2.19e-11 | 56 |
blood | 2.34e-10 | 15 |
haemolymphatic fluid | 2.34e-10 | 15 |
organism substance | 2.34e-10 | 15 |
regional part of nervous system | 3.14e-10 | 53 |
regional part of brain | 3.14e-10 | 53 |
regional part of forebrain | 9.40e-09 | 41 |
forebrain | 9.40e-09 | 41 |
anterior neural tube | 9.40e-09 | 41 |
future forebrain | 9.40e-09 | 41 |
brain | 2.99e-07 | 68 |
future brain | 2.99e-07 | 68 |