FFCP PHASE1:Hg19::chr10:115999004..115999019,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:115999004..115999019,+ to FFCP PHASE1:Hg19::chr10:115999004..115999019,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=340706 | |EntrezGene=340706 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24709 | |HGNC=24709 | ||
|TSSclassifier=strong | |||
|UniProt=Q5GFL6 | |UniProt=Q5GFL6 | ||
|association_with_transcript=0bp_to_NM_198496,uc001lbk.1,uc001lbl.1,uc009xyf.1_5end | |||
|cluster_id=chr10:115999004..115999019,+ | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_1_at_VWA2_5end | |||
|id=chr10:115999004..115999019,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.41e-08!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.45e-48!115;UBERON:0001049!1.35e-31!57;UBERON:0005068!1.35e-31!57;UBERON:0006241!1.35e-31!57;UBERON:0007135!1.35e-31!57;UBERON:0001017!4.45e-26!82;UBERON:0002780!1.84e-25!41;UBERON:0001890!1.84e-25!41;UBERON:0006240!1.84e-25!41;UBERON:0002616!2.57e-25!59;UBERON:0005743!3.64e-25!86;UBERON:0003080!1.34e-24!42;UBERON:0000955!1.61e-24!69;UBERON:0006238!1.61e-24!69;UBERON:0000153!1.77e-24!129;UBERON:0007811!1.77e-24!129;UBERON:0000073!1.69e-22!94;UBERON:0001016!1.69e-22!94;UBERON:0000033!1.72e-22!123;UBERON:0003075!5.90e-22!86;UBERON:0007284!5.90e-22!86;UBERON:0001893!2.40e-20!34;UBERON:0002346!2.76e-20!90;UBERON:0002020!3.29e-20!34;UBERON:0003528!3.29e-20!34;UBERON:0002791!2.01e-19!33;UBERON:0001869!3.82e-18!32;UBERON:0003056!9.02e-17!61;UBERON:0001950!1.37e-16!20;UBERON:0002619!1.48e-16!22;UBERON:0004121!2.22e-16!169;UBERON:0000924!1.50e-15!173;UBERON:0006601!1.50e-15!173;UBERON:0000062!6.08e-15!511;UBERON:0000481!1.15e-14!347;UBERON:0000956!6.37e-14!25;UBERON:0000203!6.37e-14!25;UBERON:0000475!7.28e-13!365;UBERON:0000922!1.16e-12!612;UBERON:0004111!1.91e-12!241;UBERON:0004921!3.44e-11!129;UBERON:0004185!3.44e-11!129;UBERON:0004119!4.21e-11!169;UBERON:0000925!4.21e-11!169;UBERON:0006595!4.21e-11!169;UBERON:0002050!8.19e-11!605;UBERON:0005423!8.19e-11!605;UBERON:0001007!1.27e-10!155;UBERON:0001555!1.27e-10!155;UBERON:0007026!1.27e-10!155;UBERON:0000468!1.72e-10!659;UBERON:0000923!2.29e-10!604;UBERON:0005291!2.29e-10!604;UBERON:0006598!2.29e-10!604;UBERON:0002532!2.29e-10!604;UBERON:0000064!2.63e-10!219;UBERON:0000477!4.41e-10!286;UBERON:0001871!5.06e-10!7;UBERON:0000467!1.02e-09!625;UBERON:0000480!1.23e-09!626;UBERON:0000025!3.60e-09!194;UBERON:0002420!3.90e-08!9;UBERON:0007245!3.90e-08!9;UBERON:0010009!3.90e-08!9;UBERON:0010011!3.90e-08!9;UBERON:0000454!3.90e-08!9;UBERON:0003076!3.98e-08!15;UBERON:0003057!3.98e-08!15;UBERON:0000464!4.97e-08!104;UBERON:0002298!5.03e-08!8;UBERON:0002308!6.68e-08!9;UBERON:0000125!6.68e-08!9;UBERON:0000077!9.84e-08!130;UBERON:0005409!4.09e-07!35;UBERON:0001004!4.45e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.11e-17;6!UBERON:0003293;1.11e-17;6!UBERON:0003294;1.11e-17;6!UBERON:0010047;1.11e-17;6!UBERON:0003408;1.11e-17;6!UBERON:0000167;1.11e-17;6!UBERON:0001041;7.81e-14;14!UBERON:0000073;3.21e-11;53!UBERON:0002616;3.21e-11;53!UBERON:0004921;9.26e-11;33!UBERON:0002298;1.18e-10;6!UBERON:0001829;7.93e-10;2!UBERON:0003127;8.45e-10;2!UBERON:0002780;3.97e-09;41!UBERON:0001890;3.97e-09;41!UBERON:0005162;8.24e-09;2!UBERON:0000122;8.24e-09;2!UBERON:0001950;1.41e-08;20!UBERON:0002619;9.50e-08;22!UBERON:0004732;2.49e-07;13!UBERON:0000922;3.81e-07;49!UBERON:0000955;4.29e-07;68!UBERON:0000956;9.58e-07;25!UBERON:0000203;9.58e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.64e-19,114;UBERON:0011216,9.08e-19,223;UBERON:0001044,9.77e-18,6;UBERON:0003293,9.77e-18,6;UBERON:0003294,9.77e-18,6;UBERON:0010047,9.77e-18,6;UBERON:0000167,9.77e-18,6;UBERON:0001049,4.30e-16,56;UBERON:0005068,4.30e-16,56;UBERON:0006241,4.30e-16,56;UBERON:0007135,4.30e-16,56;UBERON:0000073,4.00e-15,53;UBERON:0002616,4.00e-15,53;UBERON:0000955,1.87e-12,68;UBERON:0006238,1.87e-12,68;UBERON:0001017,2.94e-11,81;UBERON:0003075,3.24e-11,82;UBERON:0007284,3.24e-11,82;UBERON:0002780,3.86e-11,41;UBERON:0001890,3.86e-11,41;UBERON:0003080,3.86e-11,41;UBERON:0006240,3.86e-11,41;UBERON:0001016,4.62e-11,89;UBERON:0002298,7.83e-11,6;UBERON:0003408,1.63e-10,10;UBERON:0002346,1.63e-10,86;UBERON:0003127,8.13e-10,2;UBERON:0001829,8.13e-10,2;UBERON:0004111,8.71e-10,240;UBERON:0004921,3.00e-09,118;UBERON:0005162,1.09e-08,2;UBERON:0000122,1.09e-08,2;UBERON:0001950,1.62e-08,20;UBERON:0003056,4.76e-08,61;UBERON:0010371,4.88e-08,104;UBERON:0003528,8.22e-08,34;UBERON:0002020,8.22e-08,34;UBERON:0001893,9.50e-08,34;UBERON:0002619,1.08e-07,22;UBERON:0004121,1.23e-07,171;UBERON:0000924,1.23e-07,171;UBERON:0006601,1.23e-07,171;UBERON:0004732,1.96e-07,13;UBERON:0000025,3.99e-07,192;UBERON:0001004,6.32e-07,74 | |||
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|short_description=p1@VWA2 | |||
}} | }} |
Latest revision as of 12:28, 16 September 2015
Short description: | p1@VWA2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VWA2_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | 0bp_to_NM_198496, uc001lbk.1, uc001lbl.1, uc009xyf.1_5end |
EntrezGene: | VWA2 |
HGNC: | 24709 |
UniProt: | Q5GFL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data