FFCP PHASE1:Hg19::chr9:139651957..139651970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=138307 | |EntrezGene=138307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27038 | |HGNC=27038 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000482893_5end | |association_with_transcript=19bp_to_ENST00000482893_5end | ||
|cluster_id=chr9:139651957..139651970,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_5_at_LCN8_5end | |description=CAGE_peak_5_at_LCN8_5end | ||
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|ontology_enrichment_celltype=CL:0000819!5.30e-10!1;CL:0000188!3.50e-09!9 | |ontology_enrichment_celltype=CL:0000819!5.30e-10!1;CL:0000188!3.50e-09!9 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.85e-118;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.85e-118;3 | ||
|ontology_enrichment_disease=DOID:12603!4.85e-10!1;DOID:0060073!5.30e-10!1;DOID:8675!5.30e-10!1 | |ontology_enrichment_disease=DOID:12603!4.85e-10!1;DOID:0060073!5.30e-10!1;DOID:8675!5.30e-10!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002037!3.03e-14!6;UBERON:0006215!3.03e-14!6;UBERON:0006947!8.34e-13!3;UBERON:0004054!8.34e-13!3;UBERON:0002106!2.12e-12!3;UBERON:0004854!2.12e-12!3;UBERON:0009034!2.12e-12!3;UBERON:0002095!2.12e-12!3;UBERON:0004782!2.12e-12!3;UBERON:0003281!2.12e-12!3;UBERON:0009664!2.12e-12!3;UBERON:0002296!2.12e-12!3;UBERON:0005602!2.12e-12!3;UBERON:0001179!2.12e-12!3;UBERON:0006293!2.12e-12!3;UBERON:0004733!3.67e-12!12;UBERON:0002028!3.67e-12!12;UBERON:0007277!3.67e-12!12;UBERON:0004177!1.69e-11!7;UBERON:0004732!3.07e-11!13;UBERON:0007023!1.54e-10!115;UBERON:0005418!2.37e-10!1;UBERON:0001389!2.37e-10!1;UBERON:0000026!2.37e-10!1;UBERON:0008784!2.37e-10!1;UBERON:0006058!2.37e-10!1;UBERON:0003663!2.37e-10!1;UBERON:0001383!2.37e-10!1;UBERON:0004256!2.37e-10!1;UBERON:0002529!2.37e-10!1;UBERON:0004708!2.37e-10!1;UBERON:0002101!2.37e-10!1;UBERON:0004709!2.37e-10!1;UBERON:0003661!2.37e-10!1;UBERON:0002471!2.37e-10!1;UBERON:0004357!2.37e-10!1;UBERON:0009872!2.37e-10!1;UBERON:0004347!2.37e-10!1;UBERON:0005420!2.37e-10!1;UBERON:0005732!2.37e-10!1;UBERON:0006057!2.37e-10!1;UBERON:0000978!2.37e-10!1;UBERON:0002103!2.37e-10!1;UBERON:0001665!2.37e-10!1;UBERON:0003823!2.37e-10!1;UBERON:0000154!2.37e-10!1;UBERON:0005733!2.37e-10!1;UBERON:0005730!2.37e-10!1;UBERON:0001301!2.84e-10!1;UBERON:0007029!3.10e-10!1;UBERON:0000998!3.40e-10!1;UBERON:0006868!3.40e-10!1;UBERON:0002372!6.33e-10!1;UBERON:0001961!6.33e-10!1;UBERON:0001744!6.33e-10!1;UBERON:0001735!6.33e-10!1;UBERON:0005904!7.91e-10!4;UBERON:0003076!9.22e-10!15;UBERON:0003057!9.22e-10!15;UBERON:0002680!1.14e-09!9;UBERON:0001895!1.14e-09!9;UBERON:0010092!1.14e-09!9;UBERON:0003887!7.78e-07!21 | |ontology_enrichment_uberon=UBERON:0002037!3.03e-14!6;UBERON:0006215!3.03e-14!6;UBERON:0006947!8.34e-13!3;UBERON:0004054!8.34e-13!3;UBERON:0002106!2.12e-12!3;UBERON:0004854!2.12e-12!3;UBERON:0009034!2.12e-12!3;UBERON:0002095!2.12e-12!3;UBERON:0004782!2.12e-12!3;UBERON:0003281!2.12e-12!3;UBERON:0009664!2.12e-12!3;UBERON:0002296!2.12e-12!3;UBERON:0005602!2.12e-12!3;UBERON:0001179!2.12e-12!3;UBERON:0006293!2.12e-12!3;UBERON:0004733!3.67e-12!12;UBERON:0002028!3.67e-12!12;UBERON:0007277!3.67e-12!12;UBERON:0004177!1.69e-11!7;UBERON:0004732!3.07e-11!13;UBERON:0007023!1.54e-10!115;UBERON:0005418!2.37e-10!1;UBERON:0001389!2.37e-10!1;UBERON:0000026!2.37e-10!1;UBERON:0008784!2.37e-10!1;UBERON:0006058!2.37e-10!1;UBERON:0003663!2.37e-10!1;UBERON:0001383!2.37e-10!1;UBERON:0004256!2.37e-10!1;UBERON:0002529!2.37e-10!1;UBERON:0004708!2.37e-10!1;UBERON:0002101!2.37e-10!1;UBERON:0004709!2.37e-10!1;UBERON:0003661!2.37e-10!1;UBERON:0002471!2.37e-10!1;UBERON:0004357!2.37e-10!1;UBERON:0009872!2.37e-10!1;UBERON:0004347!2.37e-10!1;UBERON:0005420!2.37e-10!1;UBERON:0005732!2.37e-10!1;UBERON:0006057!2.37e-10!1;UBERON:0000978!2.37e-10!1;UBERON:0002103!2.37e-10!1;UBERON:0001665!2.37e-10!1;UBERON:0003823!2.37e-10!1;UBERON:0000154!2.37e-10!1;UBERON:0005733!2.37e-10!1;UBERON:0005730!2.37e-10!1;UBERON:0001301!2.84e-10!1;UBERON:0007029!3.10e-10!1;UBERON:0000998!3.40e-10!1;UBERON:0006868!3.40e-10!1;UBERON:0002372!6.33e-10!1;UBERON:0001961!6.33e-10!1;UBERON:0001744!6.33e-10!1;UBERON:0001735!6.33e-10!1;UBERON:0005904!7.91e-10!4;UBERON:0003076!9.22e-10!15;UBERON:0003057!9.22e-10!15;UBERON:0002680!1.14e-09!9;UBERON:0001895!1.14e-09!9;UBERON:0010092!1.14e-09!9;UBERON:0003887!7.78e-07!21 | ||
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|short_description=p5@LCN8 | |short_description=p5@LCN8 | ||
}} | }} |
Latest revision as of 13:07, 16 September 2015
Short description: | p5@LCN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LCN8_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 19bp_to_ENST00000482893_5end |
EntrezGene: | LCN8 |
HGNC: | 27038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data