FFCP PHASE1:Hg19::chr9:139651957..139651970,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=138307 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27038 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=19bp_to_ENST00000482893_5end | |||
|cluster_id=chr9:139651957..139651970,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_5_at_LCN8_5end | |||
|id=chr9:139651957..139651970,- | |||
|ontology_enrichment_celltype=CL:0000819!5.30e-10!1;CL:0000188!3.50e-09!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.85e-118;3 | |||
|ontology_enrichment_disease=DOID:12603!4.85e-10!1;DOID:0060073!5.30e-10!1;DOID:8675!5.30e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002037!3.03e-14!6;UBERON:0006215!3.03e-14!6;UBERON:0006947!8.34e-13!3;UBERON:0004054!8.34e-13!3;UBERON:0002106!2.12e-12!3;UBERON:0004854!2.12e-12!3;UBERON:0009034!2.12e-12!3;UBERON:0002095!2.12e-12!3;UBERON:0004782!2.12e-12!3;UBERON:0003281!2.12e-12!3;UBERON:0009664!2.12e-12!3;UBERON:0002296!2.12e-12!3;UBERON:0005602!2.12e-12!3;UBERON:0001179!2.12e-12!3;UBERON:0006293!2.12e-12!3;UBERON:0004733!3.67e-12!12;UBERON:0002028!3.67e-12!12;UBERON:0007277!3.67e-12!12;UBERON:0004177!1.69e-11!7;UBERON:0004732!3.07e-11!13;UBERON:0007023!1.54e-10!115;UBERON:0005418!2.37e-10!1;UBERON:0001389!2.37e-10!1;UBERON:0000026!2.37e-10!1;UBERON:0008784!2.37e-10!1;UBERON:0006058!2.37e-10!1;UBERON:0003663!2.37e-10!1;UBERON:0001383!2.37e-10!1;UBERON:0004256!2.37e-10!1;UBERON:0002529!2.37e-10!1;UBERON:0004708!2.37e-10!1;UBERON:0002101!2.37e-10!1;UBERON:0004709!2.37e-10!1;UBERON:0003661!2.37e-10!1;UBERON:0002471!2.37e-10!1;UBERON:0004357!2.37e-10!1;UBERON:0009872!2.37e-10!1;UBERON:0004347!2.37e-10!1;UBERON:0005420!2.37e-10!1;UBERON:0005732!2.37e-10!1;UBERON:0006057!2.37e-10!1;UBERON:0000978!2.37e-10!1;UBERON:0002103!2.37e-10!1;UBERON:0001665!2.37e-10!1;UBERON:0003823!2.37e-10!1;UBERON:0000154!2.37e-10!1;UBERON:0005733!2.37e-10!1;UBERON:0005730!2.37e-10!1;UBERON:0001301!2.84e-10!1;UBERON:0007029!3.10e-10!1;UBERON:0000998!3.40e-10!1;UBERON:0006868!3.40e-10!1;UBERON:0002372!6.33e-10!1;UBERON:0001961!6.33e-10!1;UBERON:0001744!6.33e-10!1;UBERON:0001735!6.33e-10!1;UBERON:0005904!7.91e-10!4;UBERON:0003076!9.22e-10!15;UBERON:0003057!9.22e-10!15;UBERON:0002680!1.14e-09!9;UBERON:0001895!1.14e-09!9;UBERON:0010092!1.14e-09!9;UBERON:0003887!7.78e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.01e-60;6!UBERON:0002680;3.11e-40;9!UBERON:0001895;3.11e-40;9!UBERON:0001389;3.30e-40;1!UBERON:0000026;3.30e-40;1!UBERON:0008784;3.30e-40;1!UBERON:0006058;3.30e-40;1!UBERON:0003663;3.30e-40;1!UBERON:0004256;3.30e-40;1!UBERON:0004708;3.30e-40;1!UBERON:0002101;3.30e-40;1!UBERON:0004709;3.30e-40;1!UBERON:0002529;3.30e-40;1!UBERON:0010538;3.30e-40;1!UBERON:0003661;3.30e-40;1!UBERON:0010890;3.30e-40;1!UBERON:0002471;3.30e-40;1!UBERON:0001383;3.30e-40;1!UBERON:0010758;3.30e-40;1!UBERON:0010707;3.30e-40;1!UBERON:0000978;3.30e-40;1!UBERON:0002103;3.30e-40;1!UBERON:0001665;3.30e-40;1!UBERON:0003823;3.30e-40;1!UBERON:0000154;3.30e-40;1!UBERON:0010709;3.30e-40;1!UBERON:0004733;1.91e-30;12!UBERON:0002028;1.91e-30;12!UBERON:0004732;3.48e-28;13!UBERON:0005090;6.96e-21;2!UBERON:0001630;6.96e-21;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.15e-60,6;UBERON:0006215,8.15e-60,6;UBERON:0002680,2.91e-40,9;UBERON:0001895,2.91e-40,9;UBERON:0010092,2.91e-40,9;UBERON:0005418,3.30e-40,1;UBERON:0001389,3.30e-40,1;UBERON:0000026,3.30e-40,1;UBERON:0008784,3.30e-40,1;UBERON:0006058,3.30e-40,1;UBERON:0003663,3.30e-40,1;UBERON:0004256,3.30e-40,1;UBERON:0004708,3.30e-40,1;UBERON:0002101,3.30e-40,1;UBERON:0004709,3.30e-40,1;UBERON:0002529,3.30e-40,1;UBERON:0010538,3.30e-40,1;UBERON:0003661,3.30e-40,1;UBERON:0010890,3.30e-40,1;UBERON:0002471,3.30e-40,1;UBERON:0001383,3.30e-40,1;UBERON:0004357,3.30e-40,1;UBERON:0004347,3.30e-40,1;UBERON:0005420,3.30e-40,1;UBERON:0005732,3.30e-40,1;UBERON:0010758,3.30e-40,1;UBERON:0010707,3.30e-40,1;UBERON:0000978,3.30e-40,1;UBERON:0002103,3.30e-40,1;UBERON:0001665,3.30e-40,1;UBERON:0003823,3.30e-40,1;UBERON:0000154,3.30e-40,1;UBERON:0010709,3.30e-40,1;UBERON:0005733,3.30e-40,1;UBERON:0005730,3.30e-40,1;UBERON:0004733,1.81e-30,12;UBERON:0002028,1.81e-30,12;UBERON:0007277,1.81e-30,12;UBERON:0004732,3.33e-28,13;UBERON:0003076,1.40e-24,15;UBERON:0003057,1.40e-24,15;UBERON:0005090,6.96e-21,2;UBERON:0001630,6.96e-21,2;UBERON:0000073,1.99e-07,53;UBERON:0002616,1.99e-07,53;UBERON:0001049,4.48e-07,56;UBERON:0005068,4.48e-07,56;UBERON:0006241,4.48e-07,56;UBERON:0007135,4.48e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27685187643779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5774520895125,3.75969483766164,2.65992857058193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,1.29485767437579,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0.940634592723046,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@LCN8 | |||
}} |
Latest revision as of 13:07, 16 September 2015
Short description: | p5@LCN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LCN8_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 19bp_to_ENST00000482893_5end |
EntrezGene: | LCN8 |
HGNC: | 27038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data