FFCP PHASE1:Hg19::chr5:156693783..156693810,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26999 | |EntrezGene=26999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13760 | |HGNC=13760 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFQ0 | |UniProt=E5RFQ0 | ||
|association_with_transcript=62bp_to_ENST00000522423_5end | |association_with_transcript=62bp_to_ENST00000522423_5end | ||
|cluster_id=chr5:156693783..156693810,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_11_at_CYFIP2_5end | |description=CAGE_peak_11_at_CYFIP2_5end | ||
|id=chr5:156693783..156693810,+ | |id=chr5:156693783..156693810,+ | ||
|ontology_enrichment_celltype=CL:0000542!3.87e-25!53;CL:0000051!3.87e-25!53;CL:0000838!4.28e-24!52;CL:0000738!2.63e-20!140;CL:0002087!8.17e-15!119;CL:0000084!1.90e-14!25;CL:0000827!1.90e-14!25;CL:0000037!3.30e-14!172;CL:0000566!3.30e-14!172;CL:0000791!5.71e-14!18;CL:0000789!5.71e-14!18;CL:0002420!5.71e-14!18;CL:0002419!5.71e-14!18;CL:0000790!5.71e-14!18;CL:0000988!2.11e-12!182;CL:0002032!2.16e-11!165;CL:0000837!2.16e-11!165;CL:0002031!1.35e-10!124;CL:0000094!1.50e-08!8;CL:0000945!3.66e-08!24;CL:0000826!3.66e-08!24;CL:0000624!1.50e-07!6;CL:0000625!4.24e-07!11 | |ontology_enrichment_celltype=CL:0000542!3.87e-25!53;CL:0000051!3.87e-25!53;CL:0000838!4.28e-24!52;CL:0000738!2.63e-20!140;CL:0002087!8.17e-15!119;CL:0000084!1.90e-14!25;CL:0000827!1.90e-14!25;CL:0000037!3.30e-14!172;CL:0000566!3.30e-14!172;CL:0000791!5.71e-14!18;CL:0000789!5.71e-14!18;CL:0002420!5.71e-14!18;CL:0002419!5.71e-14!18;CL:0000790!5.71e-14!18;CL:0000988!2.11e-12!182;CL:0002032!2.16e-11!165;CL:0000837!2.16e-11!165;CL:0002031!1.35e-10!124;CL:0000094!1.50e-08!8;CL:0000945!3.66e-08!24;CL:0000826!3.66e-08!24;CL:0000624!1.50e-07!6;CL:0000625!4.24e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.55e-11;8!CL:0000791;8.34e-11;18!CL:0000789;8.34e-11;18!CL:0002419;8.34e-11;18!CL:0000623;9.98e-11;3!CL:0000084;1.95e-09;25!CL:0000542;7.22e-09;53!CL:0000771;1.21e-08;2!CL:0000081;4.07e-08;11!CL:0000625;1.59e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.56e-16,53;CL:0000051,1.56e-16,53;CL:0000838,5.73e-15,52;CL:0000738,1.52e-12,136;CL:0000094,1.70e-11,8;CL:0000623,4.48e-11,3;CL:0000825,4.48e-11,3;CL:0000791,6.94e-11,18;CL:0000789,6.94e-11,18;CL:0002420,6.94e-11,18;CL:0002419,6.94e-11,18;CL:0000790,6.94e-11,18;CL:0000084,1.78e-09,25;CL:0000827,1.78e-09,25;CL:0000037,6.85e-09,168;CL:0000771,1.22e-08,2;CL:0002087,1.26e-08,115;CL:0000081,3.06e-08,11;CL:0000988,4.11e-08,177;CL:0000625,1.43e-07,11;CL:0002032,4.38e-07,161;CL:0000837,4.38e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;8.34e-11;18!CL:0000051;7.22e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.64e-24!115;UBERON:0001049!1.10e-21!57;UBERON:0005068!1.10e-21!57;UBERON:0006241!1.10e-21!57;UBERON:0007135!1.10e-21!57;UBERON:0002780!1.85e-19!41;UBERON:0001890!1.85e-19!41;UBERON:0006240!1.85e-19!41;UBERON:0003080!9.02e-19!42;UBERON:0002616!3.53e-18!59;UBERON:0000955!1.62e-14!69;UBERON:0006238!1.62e-14!69;UBERON:0001893!3.10e-13!34;UBERON:0002020!4.53e-13!34;UBERON:0003528!4.53e-13!34;UBERON:0001017!8.93e-13!82;UBERON:0005743!1.97e-12!86;UBERON:0002791!2.29e-12!33;UBERON:0001869!5.02e-12!32;UBERON:0003075!3.26e-11!86;UBERON:0007284!3.26e-11!86;UBERON:0000073!5.00e-11!94;UBERON:0001016!5.00e-11!94;UBERON:0003056!5.59e-11!61;UBERON:0002619!1.27e-10!22;UBERON:0002346!3.13e-10!90;UBERON:0000956!7.43e-09!25;UBERON:0000203!7.43e-09!25;UBERON:0001950!8.38e-09!20;UBERON:0001894!8.59e-09!7;UBERON:0006222!8.59e-09!7;UBERON:0000153!1.64e-07!129;UBERON:0007811!1.64e-07!129;UBERON:0000349!2.90e-07!5;UBERON:0000178!5.49e-07!15;UBERON:0000179!5.49e-07!15;UBERON:0000463!5.49e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.19e-12;41!UBERON:0001890;8.19e-12;41!UBERON:0001869;5.92e-09;32!UBERON:0001893;7.12e-08;34!UBERON:0002619;7.27e-08;22!UBERON:0002370;7.82e-08;2!UBERON:0005058;7.82e-08;2!UBERON:0009113;7.82e-08;2!UBERON:0001894;8.56e-08;7!UBERON:0002791;1.37e-07;32!UBERON:0000007;1.87e-07;2!UBERON:0000178;2.39e-07;15!UBERON:0000179;2.39e-07;15!UBERON:0000463;2.39e-07;15!UBERON:0000073;2.43e-07;53!UBERON:0002616;2.43e-07;53!UBERON:0000956;8.25e-07;25!UBERON:0000203;8.25e-07;25!UBERON:0001950;9.52e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,7.22e-14,41;UBERON:0001890,7.22e-14,41;UBERON:0003080,7.22e-14,41;UBERON:0006240,7.22e-14,41;UBERON:0000073,5.00e-10,53;UBERON:0002616,5.00e-10,53;UBERON:0003056,1.29e-09,61;UBERON:0001869,1.54e-09,32;UBERON:0001049,2.52e-09,56;UBERON:0005068,2.52e-09,56;UBERON:0006241,2.52e-09,56;UBERON:0007135,2.52e-09,56;UBERON:0007023,2.73e-09,114;UBERON:0001893,7.21e-09,34;UBERON:0002370,1.85e-08,4;UBERON:0005058,1.85e-08,4;UBERON:0009113,1.85e-08,4;UBERON:0003295,1.85e-08,4;UBERON:0005562,1.85e-08,4;UBERON:0001894,6.80e-08,7;UBERON:0006222,6.80e-08,7;UBERON:0002791,6.93e-08,32;UBERON:0002619,1.14e-07,22;UBERON:0000007,2.38e-07,2;UBERON:0003528,2.49e-07,34;UBERON:0002020,2.49e-07,34;UBERON:0000178,2.99e-07,15;UBERON:0000179,2.99e-07,15;UBERON:0000463,2.99e-07,15;UBERON:0000955,5.36e-07,68;UBERON:0006238,5.36e-07,68 | |||
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| ||
|short_description=p11@CYFIP2 | |short_description=p11@CYFIP2 | ||
}} | }} |
Latest revision as of 13:40, 16 September 2015
Short description: | p11@CYFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CYFIP2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 62bp_to_ENST00000522423_5end |
EntrezGene: | CYFIP2 |
HGNC: | 13760 |
UniProt: | E5RFQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.56e-16 | 53 |
common lymphoid progenitor | 1.56e-16 | 53 |
lymphoid lineage restricted progenitor cell | 5.73e-15 | 52 |
leukocyte | 1.52e-12 | 136 |
granulocyte | 1.70e-11 | 8 |
natural killer cell | 4.48e-11 | 3 |
pro-NK cell | 4.48e-11 | 3 |
mature alpha-beta T cell | 6.94e-11 | 18 |
alpha-beta T cell | 6.94e-11 | 18 |
immature T cell | 6.94e-11 | 18 |
mature T cell | 6.94e-11 | 18 |
immature alpha-beta T cell | 6.94e-11 | 18 |
T cell | 1.78e-09 | 25 |
pro-T cell | 1.78e-09 | 25 |
hematopoietic stem cell | 6.85e-09 | 168 |
eosinophil | 1.22e-08 | 2 |
nongranular leukocyte | 1.26e-08 | 115 |
blood cell | 3.06e-08 | 11 |
hematopoietic cell | 4.11e-08 | 177 |
CD8-positive, alpha-beta T cell | 1.43e-07 | 11 |
hematopoietic oligopotent progenitor cell | 4.38e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.38e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 7.22e-14 | 41 |
forebrain | 7.22e-14 | 41 |
anterior neural tube | 7.22e-14 | 41 |
future forebrain | 7.22e-14 | 41 |
regional part of nervous system | 5.00e-10 | 53 |
regional part of brain | 5.00e-10 | 53 |
pre-chordal neural plate | 1.29e-09 | 61 |
cerebral hemisphere | 1.54e-09 | 32 |
neural tube | 2.52e-09 | 56 |
neural rod | 2.52e-09 | 56 |
future spinal cord | 2.52e-09 | 56 |
neural keel | 2.52e-09 | 56 |
adult organism | 2.73e-09 | 114 |
telencephalon | 7.21e-09 | 34 |
thymus | 1.85e-08 | 4 |
hemolymphoid system gland | 1.85e-08 | 4 |
thymic region | 1.85e-08 | 4 |
pharyngeal gland | 1.85e-08 | 4 |
thymus primordium | 1.85e-08 | 4 |
diencephalon | 6.80e-08 | 7 |
future diencephalon | 6.80e-08 | 7 |
regional part of telencephalon | 6.93e-08 | 32 |
regional part of cerebral cortex | 1.14e-07 | 22 |
pituitary gland | 2.38e-07 | 2 |
brain grey matter | 2.49e-07 | 34 |
gray matter | 2.49e-07 | 34 |
blood | 2.99e-07 | 15 |
haemolymphatic fluid | 2.99e-07 | 15 |
organism substance | 2.99e-07 | 15 |
brain | 5.36e-07 | 68 |
future brain | 5.36e-07 | 68 |