FFCP PHASE1:Hg19::chr13:20806362..20806373,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10804 | |EntrezGene=10804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4288 | |HGNC=4288 | ||
|TSSclassifier=strong | |||
|UniProt=O95452 | |UniProt=O95452 | ||
|association_with_transcript=66bp_to_ENST00000400066_5end | |association_with_transcript=66bp_to_ENST00000400066_5end | ||
|cluster_id=chr13:20806362..20806373,- | |||
|description=CAGE_peak_4_at_GJB6_5end | |description=CAGE_peak_4_at_GJB6_5end | ||
|id=chr13:20806362..20806373,- | |id=chr13:20806362..20806373,- | ||
|ontology_enrichment_celltype=CL:0002368;3.13e-16;13!CL:0000244;2.31e-12;4!CL:0000731;2.31e-12;4!CL:0002076;3.43e-12;42!CL:0002159;5.52e-11;14!CL:0002202;6.90e-11;9!CL:0002632;6.90e-11;9!CL:0000307;2.88e-09;3!CL:0002328;3.44e-09;3!CL:0000240;2.69e-07;6!CL:0000311;2.69e-07;6!CL:0000079;2.69e-07;6!CL:0000237;2.69e-07;6!CL:0002251;2.77e-07;20!CL:0000362;3.60e-07;9!CL:0000575;8.33e-07;2 | |ontology_enrichment_celltype=CL:0002076!1.83e-16!43;CL:0000223!1.63e-11!59;CL:0002368!2.09e-10!13;CL:0002251!4.31e-08!21;CL:0000244!2.84e-07!4;CL:0000731!2.84e-07!4 | ||
| | |ontology_enrichment_celltype_v019=CL:0002368;3.13e-16;13!CL:0000244;2.31e-12;4!CL:0000731;2.31e-12;4!CL:0002076;3.43e-12;42!CL:0002159;5.52e-11;14!CL:0002202;6.90e-11;9!CL:0002632;6.90e-11;9!CL:0000307;2.88e-09;3!CL:0002328;3.44e-09;3!CL:0000240;2.69e-07;6!CL:0000311;2.69e-07;6!CL:0000079;2.69e-07;6!CL:0000237;2.69e-07;6!CL:0002251;2.77e-07;20!CL:0000362;3.60e-07;9!CL:0000575;8.33e-07;2 | ||
|ontology_enrichment_disease=DOID:1749;6.00e-11;14 | |ontology_enrichment_celltype_v019_2=CL:0002076,1.11e-16,42;CL:0002368,3.39e-16,13;CL:0000244,2.49e-12,4;CL:0000731,2.49e-12,4;CL:0002159,5.83e-11,14;CL:0002202,7.90e-11,9;CL:0002632,7.90e-11,9;CL:0000223,9.11e-11,58;CL:0002328,3.27e-09,3;CL:0000068,3.75e-09,3;CL:0000069,3.75e-09,3;CL:0000307,3.75e-09,3;CL:0000377,3.75e-09,3;CL:0002251,2.20e-07,20;CL:0000240,2.52e-07,6;CL:0000311,2.52e-07,6;CL:0000079,2.52e-07,6;CL:0000237,2.52e-07,6;CL:0000036,2.52e-07,6;CL:0000357,2.52e-07,6;CL:0000114,2.52e-07,6;CL:0000362,4.08e-07,9;CL:0000076,5.19e-07,63;CL:0000575,9.86e-07,2 | ||
|ontology_enrichment_uberon=UBERON:0000365;1.15e-14;5!UBERON:0005910;3.87e-12;6!UBERON:0001869;8.99e-11;32!UBERON:0002619;2.07e-10;22!UBERON:0001893;1.05e-09;34!UBERON:0001950;1.46e-09;20!UBERON:0004815;3.44e-09;3!UBERON:0002031;3.44e-09;3!UBERON:0002791;4.15e-09;32!UBERON:0000956;5.95e-09;25!UBERON:0000203;5.95e-09;25!UBERON:0003528;1.09e-08;34!UBERON:0002020;1.09e-08;34!UBERON:0002780;3.46e-08;41!UBERON:0001890;3.46e-08;41!UBERON:0007196;4.01e-08;15!UBERON:0001558;4.01e-08;15!UBERON:0000486;6.55e-08;12!UBERON:0001872;7.24e-08;5!UBERON:0000165;1.10e-07;28!UBERON:0000974;1.79e-07;6!UBERON:0006562;8.33e-07;2!UBERON:0003343;9.15e-07;4!UBERON:0004785;9.15e-07;4 | |ontology_enrichment_development_v019=CL:0000377;2.88e-09;3!UBERON:0006601;1.29e-07;82!CL:0000357;2.69e-07;6!CL:0000114;2.69e-07;6 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;6.00e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.66e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.17e-25!57;UBERON:0005068!2.17e-25!57;UBERON:0006241!2.17e-25!57;UBERON:0007135!2.17e-25!57;UBERON:0007023!1.45e-22!115;UBERON:0002780!2.49e-22!41;UBERON:0001890!2.49e-22!41;UBERON:0006240!2.49e-22!41;UBERON:0003080!1.44e-21!42;UBERON:0000153!1.91e-21!129;UBERON:0007811!1.91e-21!129;UBERON:0002020!2.41e-21!34;UBERON:0003528!2.41e-21!34;UBERON:0001893!2.55e-21!34;UBERON:0002616!4.55e-21!59;UBERON:0004121!9.27e-21!169;UBERON:0000033!2.18e-20!123;UBERON:0002791!2.36e-20!33;UBERON:0001869!6.70e-20!32;UBERON:0000924!8.63e-20!173;UBERON:0006601!8.63e-20!173;UBERON:0003075!5.45e-19!86;UBERON:0007284!5.45e-19!86;UBERON:0000955!3.93e-18!69;UBERON:0006238!3.93e-18!69;UBERON:0002619!4.45e-18!22;UBERON:0001017!8.85e-18!82;UBERON:0002346!1.59e-17!90;UBERON:0005743!2.90e-17!86;UBERON:0001950!4.58e-16!20;UBERON:0000073!1.89e-15!94;UBERON:0001016!1.89e-15!94;UBERON:0003056!2.24e-15!61;UBERON:0000956!2.96e-15!25;UBERON:0000203!2.96e-15!25;UBERON:0000166!1.66e-08!21;UBERON:0000365!1.75e-08!5;UBERON:0002420!5.15e-08!9;UBERON:0007245!5.15e-08!9;UBERON:0010009!5.15e-08!9;UBERON:0010011!5.15e-08!9;UBERON:0000454!5.15e-08!9;UBERON:0000064!6.87e-08!219;UBERON:0000161!6.88e-08!35;UBERON:0000200!1.20e-07!6;UBERON:0002308!1.32e-07!9;UBERON:0000125!1.32e-07!9;UBERON:0000062!1.40e-07!511;UBERON:0001871!3.33e-07!7;UBERON:0000475!3.40e-07!365;UBERON:0004111!5.15e-07!241;UBERON:0005910!6.44e-07!6;UBERON:0000349!9.75e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.15e-14;5!UBERON:0005910;3.87e-12;6!UBERON:0001869;8.99e-11;32!UBERON:0002619;2.07e-10;22!UBERON:0001893;1.05e-09;34!UBERON:0001950;1.46e-09;20!UBERON:0004815;3.44e-09;3!UBERON:0002031;3.44e-09;3!UBERON:0002791;4.15e-09;32!UBERON:0000956;5.95e-09;25!UBERON:0000203;5.95e-09;25!UBERON:0003528;1.09e-08;34!UBERON:0002020;1.09e-08;34!UBERON:0002780;3.46e-08;41!UBERON:0001890;3.46e-08;41!UBERON:0007196;4.01e-08;15!UBERON:0001558;4.01e-08;15!UBERON:0000486;6.55e-08;12!UBERON:0001872;7.24e-08;5!UBERON:0000165;1.10e-07;28!UBERON:0000974;1.79e-07;6!UBERON:0006562;8.33e-07;2!UBERON:0003343;9.15e-07;4!UBERON:0004785;9.15e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.33e-14,5;UBERON:0004121,6.65e-13,171;UBERON:0000924,6.65e-13,171;UBERON:0006601,6.65e-13,171;UBERON:0005910,4.35e-12,6;UBERON:0010371,3.54e-11,104;UBERON:0001869,4.86e-11,32;UBERON:0007023,1.39e-10,114;UBERON:0002619,2.56e-10,22;UBERON:0001893,3.14e-10,34;UBERON:0002791,1.82e-09,32;UBERON:0001950,1.95e-09,20;UBERON:0002780,2.59e-09,41;UBERON:0001890,2.59e-09,41;UBERON:0003080,2.59e-09,41;UBERON:0006240,2.59e-09,41;UBERON:0004815,3.27e-09,3;UBERON:0002031,3.27e-09,3;UBERON:0001049,3.46e-09,56;UBERON:0005068,3.46e-09,56;UBERON:0006241,3.46e-09,56;UBERON:0007135,3.46e-09,56;UBERON:0000956,7.15e-09,25;UBERON:0000203,7.15e-09,25;UBERON:0003528,9.14e-09,34;UBERON:0002020,9.14e-09,34;UBERON:0000073,1.17e-08,53;UBERON:0002616,1.17e-08,53;UBERON:0001004,1.90e-08,74;UBERON:0003056,2.06e-08,61;UBERON:0000166,2.21e-08,22;UBERON:0011216,2.28e-08,223;UBERON:0007196,5.23e-08,15;UBERON:0001558,5.23e-08,15;UBERON:0003075,9.74e-08,82;UBERON:0007284,9.74e-08,82;UBERON:0001872,1.26e-07,5;UBERON:0001017,1.49e-07,81;UBERON:0004119,1.92e-07,160;UBERON:0000925,1.92e-07,160;UBERON:0006595,1.92e-07,160;UBERON:0003102,2.03e-07,99;UBERON:0000165,2.19e-07,29;UBERON:0000930,2.19e-07,29;UBERON:0000033,3.12e-07,56;UBERON:0001016,3.14e-07,89;UBERON:0000153,3.21e-07,62;UBERON:0007811,3.21e-07,62;UBERON:0002346,3.61e-07,86;UBERON:0003343,7.32e-07,4;UBERON:0004785,7.32e-07,4;UBERON:0010314,9.30e-07,132;UBERON:0000161,9.52e-07,36 | |||
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| ||
|short_description=p4@GJB6 | |short_description=p4@GJB6 | ||
}} | }} |
Latest revision as of 18:50, 16 September 2015
Short description: | p4@GJB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GJB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 66bp_to_ENST00000400066_5end |
EntrezGene: | GJB6 |
HGNC: | 4288 |
UniProt: | O95452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.11e-16 | 42 |
respiratory epithelial cell | 3.39e-16 | 13 |
transitional epithelial cell | 2.49e-12 | 4 |
urothelial cell | 2.49e-12 | 4 |
general ecto-epithelial cell | 5.83e-11 | 14 |
epithelial cell of tracheobronchial tree | 7.90e-11 | 9 |
epithelial cell of lower respiratory tract | 7.90e-11 | 9 |
endodermal cell | 9.11e-11 | 58 |
bronchial epithelial cell | 3.27e-09 | 3 |
duct epithelial cell | 3.75e-09 | 3 |
branched duct epithelial cell | 3.75e-09 | 3 |
tracheal epithelial cell | 3.75e-09 | 3 |
tracheoblast | 3.75e-09 | 3 |
epithelial cell of alimentary canal | 2.20e-07 | 20 |
stratified squamous epithelial cell | 2.52e-07 | 6 |
keratin accumulating cell | 2.52e-07 | 6 |
stratified epithelial cell | 2.52e-07 | 6 |
keratinizing barrier epithelial cell | 2.52e-07 | 6 |
epithelial fate stem cell | 2.52e-07 | 6 |
stratified epithelial stem cell | 2.52e-07 | 6 |
surface ectodermal cell | 2.52e-07 | 6 |
epidermal cell | 4.08e-07 | 9 |
squamous epithelial cell | 5.19e-07 | 63 |
corneal epithelial cell | 9.86e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.66e-11 | 14 |