FFCP PHASE1:Hg19::chr8:141521568..141521589,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54108 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13544 | |||
|TSSclassifier=strong | |||
|UniProt=E5RGS9 | |||
|association_with_transcript=158bp_to_ENST00000519533_5end | |||
|cluster_id=chr8:141521568..141521589,+ | |||
|description=CAGE_peak_4_at_CHRAC1_5end | |||
|id=chr8:141521568..141521589,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.59e-11!42;CL:0002087!3.38e-11!119;CL:0000860!9.45e-11!45;CL:0002031!1.70e-10!124;CL:0000037!1.96e-10!172;CL:0000566!1.96e-10!172;CL:0000738!3.07e-10!140;CL:0000988!2.10e-09!182;CL:0002032!6.07e-09!165;CL:0000837!6.07e-09!165;CL:0000839!7.75e-09!70;CL:0000557!9.31e-09!71;CL:0002194!1.06e-08!63;CL:0000576!1.06e-08!63;CL:0000040!1.06e-08!63;CL:0000559!1.06e-08!63;CL:0000766!1.95e-08!76;CL:0002009!3.51e-08!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.32e-09;33!CL:0002057;6.32e-09;33!CL:0000473;9.73e-09;39!CL:0000234;9.73e-09;39!CL:0000576;4.99e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.73e-13,48;CL:0000234,2.73e-13,48;CL:0002087,6.01e-12,115;CL:0000037,8.32e-12,168;CL:0000738,1.35e-11,136;CL:0000860,1.46e-11,42;CL:0002057,1.46e-11,42;CL:0002031,2.43e-11,120;CL:0000988,8.09e-11,177;CL:0002032,3.42e-10,161;CL:0000837,3.42e-10,161;CL:0000839,5.83e-10,66;CL:0000557,6.26e-10,67;CL:0000766,6.77e-10,72;CL:0002194,8.00e-10,59;CL:0000576,8.00e-10,59;CL:0000040,8.00e-10,59;CL:0000559,8.00e-10,59;CL:0002009,2.38e-09,61;CL:0000763,9.02e-08,108;CL:0000049,9.02e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.84e-13!115;UBERON:0001049!1.11e-08!57;UBERON:0005068!1.11e-08!57;UBERON:0006241!1.11e-08!57;UBERON:0007135!1.11e-08!57;UBERON:0001474!1.88e-08!86;UBERON:0002780!2.77e-08!41;UBERON:0001890!2.77e-08!41;UBERON:0006240!2.77e-08!41;UBERON:0003080!9.02e-08!42;UBERON:0002371!1.52e-07!80;UBERON:0000073!2.10e-07!94;UBERON:0001016!2.10e-07!94;UBERON:0005743!4.37e-07!86;UBERON:0004765!5.19e-07!101;UBERON:0001434!5.19e-07!101;UBERON:0001017!6.11e-07!82;UBERON:0002616!7.19e-07!59;UBERON:0001893!8.93e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.63e-13,114;UBERON:0001474,2.36e-09,82;UBERON:0001049,3.91e-09,56;UBERON:0005068,3.91e-09,56;UBERON:0006241,3.91e-09,56;UBERON:0007135,3.91e-09,56;UBERON:0000073,1.84e-08,53;UBERON:0002616,1.84e-08,53;UBERON:0002371,2.16e-08,76;UBERON:0002780,2.75e-08,41;UBERON:0001890,2.75e-08,41;UBERON:0003080,2.75e-08,41;UBERON:0006240,2.75e-08,41;UBERON:0004765,4.64e-08,90;UBERON:0001434,6.72e-08,100;UBERON:0003075,1.51e-07,82;UBERON:0007284,1.51e-07,82;UBERON:0001016,1.70e-07,89;UBERON:0001017,3.18e-07,81;UBERON:0002346,4.57e-07,86;UBERON:0001893,9.53e-07,34 | |||
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| |||
|short_description=p4@CHRAC1 | |||
}} |
Latest revision as of 19:10, 16 September 2015
Short description: | p4@CHRAC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHRAC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 158bp_to_ENST00000519533_5end |
EntrezGene: | CHRAC1 |
HGNC: | 13544 |
UniProt: | E5RGS9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.73e-13 | 48 |
phagocyte | 2.73e-13 | 48 |
nongranular leukocyte | 6.01e-12 | 115 |
hematopoietic stem cell | 8.32e-12 | 168 |
leukocyte | 1.35e-11 | 136 |
classical monocyte | 1.46e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-11 | 42 |
hematopoietic lineage restricted progenitor cell | 2.43e-11 | 120 |
hematopoietic cell | 8.09e-11 | 177 |
hematopoietic oligopotent progenitor cell | 3.42e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.42e-10 | 161 |
myeloid lineage restricted progenitor cell | 5.83e-10 | 66 |
granulocyte monocyte progenitor cell | 6.26e-10 | 67 |
myeloid leukocyte | 6.77e-10 | 72 |
monopoietic cell | 8.00e-10 | 59 |
monocyte | 8.00e-10 | 59 |
monoblast | 8.00e-10 | 59 |
promonocyte | 8.00e-10 | 59 |
macrophage dendritic cell progenitor | 2.38e-09 | 61 |
myeloid cell | 9.02e-08 | 108 |
common myeloid progenitor | 9.02e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.63e-13 | 114 |
bone element | 2.36e-09 | 82 |
neural tube | 3.91e-09 | 56 |
neural rod | 3.91e-09 | 56 |
future spinal cord | 3.91e-09 | 56 |
neural keel | 3.91e-09 | 56 |
regional part of nervous system | 1.84e-08 | 53 |
regional part of brain | 1.84e-08 | 53 |
bone marrow | 2.16e-08 | 76 |
regional part of forebrain | 2.75e-08 | 41 |
forebrain | 2.75e-08 | 41 |
anterior neural tube | 2.75e-08 | 41 |
future forebrain | 2.75e-08 | 41 |
skeletal element | 4.64e-08 | 90 |
skeletal system | 6.72e-08 | 100 |
neural plate | 1.51e-07 | 82 |
presumptive neural plate | 1.51e-07 | 82 |
nervous system | 1.70e-07 | 89 |
central nervous system | 3.18e-07 | 81 |
neurectoderm | 4.57e-07 | 86 |
telencephalon | 9.53e-07 | 34 |