FFCP PHASE1:Hg19::chr1:243418998..243419012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9859 | |EntrezGene=9859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28920 | |HGNC=28920 | ||
|TSSclassifier=strong | |||
|UniProt=E7ES90,F8W8A3,Q5SW79 | |UniProt=E7ES90,F8W8A3,Q5SW79 | ||
|association_with_transcript=-290bp_to_ENST00000424081,ENST00000532008,NM_001042404,NM_001042405,NM_014812,uc001hzs.2,uc001hzt.2,uc001hzu.2_5end | |association_with_transcript=-290bp_to_ENST00000424081,ENST00000532008,NM_001042404,NM_001042405,NM_014812,uc001hzs.2,uc001hzt.2,uc001hzu.2_5end | ||
|cluster_id=chr1:243418998..243419012,- | |||
|description=CAGE_peak_8_at_CEP170_5end | |description=CAGE_peak_8_at_CEP170_5end | ||
|id=chr1:243418998..243419012,- | |id=chr1:243418998..243419012,- | ||
|ontology_enrichment_celltype=CL:0000055!1.91e-21!180;CL:0000048!1.06e-19!430;CL:0000723!3.28e-19!436;CL:0000034!1.75e-18!444;CL:0000222!1.53e-17!119;CL:0000680!5.54e-17!57;CL:0000056!5.54e-17!57;CL:0000355!5.54e-17!57;CL:0000359!7.21e-17!32;CL:0000144!2.32e-16!625;CL:0000192!3.58e-16!42;CL:0000514!3.58e-16!42;CL:0000057!1.23e-15!75;CL:0000187!2.55e-15!54;CL:0002371!2.84e-15!591;CL:0000393!1.46e-14!60;CL:0000211!1.46e-14!60;CL:0000183!1.71e-12!59;CL:0000012!5.40e-11!682;CL:0000548!1.30e-10!679;CL:0000004!1.30e-10!679;CL:0000255!1.30e-10!679;CL:0002334!4.00e-10!12;CL:0002539!9.47e-09!10;CL:0002494!4.87e-08!16;CL:0002620!8.18e-08!23;CL:0000134!7.02e-07!358 | |ontology_enrichment_celltype=CL:0000055!1.91e-21!180;CL:0000048!1.06e-19!430;CL:0000723!3.28e-19!436;CL:0000034!1.75e-18!444;CL:0000222!1.53e-17!119;CL:0000680!5.54e-17!57;CL:0000056!5.54e-17!57;CL:0000355!5.54e-17!57;CL:0000359!7.21e-17!32;CL:0000144!2.32e-16!625;CL:0000192!3.58e-16!42;CL:0000514!3.58e-16!42;CL:0000057!1.23e-15!75;CL:0000187!2.55e-15!54;CL:0002371!2.84e-15!591;CL:0000393!1.46e-14!60;CL:0000211!1.46e-14!60;CL:0000183!1.71e-12!59;CL:0000012!5.40e-11!682;CL:0000548!1.30e-10!679;CL:0000004!1.30e-10!679;CL:0000255!1.30e-10!679;CL:0002334!4.00e-10!12;CL:0002539!9.47e-09!10;CL:0002494!4.87e-08!16;CL:0002620!8.18e-08!23;CL:0000134!7.02e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.70e-30;32!CL:0000192;9.83e-19;43!CL:0002334;3.75e-18;12!CL:0002539;1.30e-15;10!CL:0000187;1.52e-10;55!CL:0002494;4.06e-09;16!CL:0002595;2.21e-08;5!CL:0002551;2.45e-08;6!CL:0000393;5.35e-08;61!CL:0000211;5.35e-08;61!CL:0000057;2.29e-07;73!CL:1000306;7.92e-07;4!CL:0002547;7.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.75e-32,32;CL:0000192,1.03e-24,43;CL:0000514,1.03e-24,43;CL:0000680,6.02e-23,58;CL:0000056,6.02e-23,58;CL:0000355,6.02e-23,58;CL:0000187,4.91e-20,55;CL:0000048,3.01e-19,427;CL:0000723,1.48e-18,433;CL:0000393,2.86e-18,61;CL:0000211,2.86e-18,61;CL:0002334,2.94e-18,12;CL:0000034,2.95e-18,441;CL:0000222,1.63e-17,121;CL:0000057,7.68e-17,76;CL:0002539,1.40e-15,10;CL:0002494,2.94e-09,16;CL:0002551,1.38e-08,6;CL:0002595,2.91e-08,5;CL:1000306,5.81e-07,4;CL:0002547,5.81e-07,4;CL:0000569,7.89e-07,4;CL:0000011,7.89e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;9.83e-19;43!CL:0000355;8.73e-11;58 | |||
|ontology_enrichment_disease=DOID:2394!1.44e-09!14 | |ontology_enrichment_disease=DOID:2394!1.44e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;9.53e-16;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.33e-16,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!4.72e-24!42;UBERON:0003509!4.72e-24!42;UBERON:0004572!4.72e-24!42;UBERON:0001981!2.85e-23!60;UBERON:0007500!2.85e-23!60;UBERON:0004537!2.85e-23!60;UBERON:0006965!2.85e-23!60;UBERON:0000055!6.95e-23!69;UBERON:0004872!1.37e-22!84;UBERON:0002049!6.45e-21!79;UBERON:0007798!6.45e-21!79;UBERON:0004573!5.41e-19!33;UBERON:0004571!5.41e-19!33;UBERON:0004535!3.02e-18!110;UBERON:0001009!5.82e-17!113;UBERON:0004290!4.70e-16!70;UBERON:0001134!1.44e-14!61;UBERON:0002036!1.44e-14!61;UBERON:0003082!1.44e-14!61;UBERON:0000914!1.52e-14!83;UBERON:0002329!1.52e-14!83;UBERON:0003077!1.52e-14!83;UBERON:0003059!1.52e-14!83;UBERON:0007282!1.52e-14!83;UBERON:0009618!1.52e-14!83;UBERON:0007285!1.52e-14!83;UBERON:0002385!1.70e-13!63;UBERON:0001015!1.70e-13!63;UBERON:0000383!1.70e-13!63;UBERON:0003914!2.15e-13!118;UBERON:0000486!5.28e-13!82;UBERON:0000947!1.26e-12!21;UBERON:0010191!1.26e-12!21;UBERON:0000490!5.81e-11!138;UBERON:0003081!2.08e-10!216;UBERON:0002204!4.95e-10!167;UBERON:0004237!9.47e-09!10;UBERON:0004695!9.47e-09!10;UBERON:0002111!9.47e-09!10;UBERON:0004178!9.47e-09!10;UBERON:0001135!7.74e-07!15 | |ontology_enrichment_uberon=UBERON:0001637!4.72e-24!42;UBERON:0003509!4.72e-24!42;UBERON:0004572!4.72e-24!42;UBERON:0001981!2.85e-23!60;UBERON:0007500!2.85e-23!60;UBERON:0004537!2.85e-23!60;UBERON:0006965!2.85e-23!60;UBERON:0000055!6.95e-23!69;UBERON:0004872!1.37e-22!84;UBERON:0002049!6.45e-21!79;UBERON:0007798!6.45e-21!79;UBERON:0004573!5.41e-19!33;UBERON:0004571!5.41e-19!33;UBERON:0004535!3.02e-18!110;UBERON:0001009!5.82e-17!113;UBERON:0004290!4.70e-16!70;UBERON:0001134!1.44e-14!61;UBERON:0002036!1.44e-14!61;UBERON:0003082!1.44e-14!61;UBERON:0000914!1.52e-14!83;UBERON:0002329!1.52e-14!83;UBERON:0003077!1.52e-14!83;UBERON:0003059!1.52e-14!83;UBERON:0007282!1.52e-14!83;UBERON:0009618!1.52e-14!83;UBERON:0007285!1.52e-14!83;UBERON:0002385!1.70e-13!63;UBERON:0001015!1.70e-13!63;UBERON:0000383!1.70e-13!63;UBERON:0003914!2.15e-13!118;UBERON:0000486!5.28e-13!82;UBERON:0000947!1.26e-12!21;UBERON:0010191!1.26e-12!21;UBERON:0000490!5.81e-11!138;UBERON:0003081!2.08e-10!216;UBERON:0002204!4.95e-10!167;UBERON:0004237!9.47e-09!10;UBERON:0004695!9.47e-09!10;UBERON:0002111!9.47e-09!10;UBERON:0004178!9.47e-09!10;UBERON:0001135!7.74e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.63e-30;33!UBERON:0004571;1.63e-30;33!UBERON:0001637;5.57e-27;42!UBERON:0003509;5.57e-27;42!UBERON:0004572;5.57e-27;42!UBERON:0000947;1.70e-20;21!UBERON:0010191;1.70e-20;21!UBERON:0007500;1.52e-16;56!UBERON:0001981;1.52e-16;56!UBERON:0004537;1.52e-16;56!UBERON:0004237;1.30e-15;10!UBERON:0004695;1.30e-15;10!UBERON:0002111;1.30e-15;10!UBERON:0004178;1.30e-15;10!UBERON:0000055;7.65e-14;65!UBERON:0002049;9.81e-12;75!UBERON:0007798;9.81e-12;75!UBERON:0003914;4.54e-10;74!UBERON:0001135;1.72e-09;15!UBERON:0003834;2.21e-08;5!UBERON:0001533;2.21e-08;5!UBERON:0000992;4.27e-08;13!UBERON:0003513;8.28e-08;7!UBERON:0002385;1.07e-07;31!UBERON:0001015;1.07e-07;31!UBERON:0000383;1.07e-07;31!UBERON:0002118;1.86e-07;5!UBERON:0004535;6.23e-07;109!UBERON:0004797;7.92e-07;4!UBERON:0000415;7.92e-07;4!UBERON:0007240;7.92e-07;4!UBERON:0005742;7.92e-07;4!UBERON:0005734;7.92e-07;4!UBERON:0004664;7.92e-07;4!UBERON:0004663;7.92e-07;4!UBERON:0002119;8.05e-07;4 | |||
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| ||
|short_description=p8@CEP170 | |short_description=p8@CEP170 | ||
}} | }} |
Latest revision as of 19:26, 16 September 2015
Short description: | p8@CEP170 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CEP170_5end |
Coexpression cluster: | NA |
Association with transcript: | -290bp_to_ENST00000424081, ENST00000532008, NM_001042404, NM_001042405, NM_014812, uc001hzs.2, uc001hzt.2, uc001hzu.2_5end |
EntrezGene: | CEP170 |
HGNC: | 28920 |
UniProt: | E7ES90F8W8A3Q5SW79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.75e-32 | 32 |
smooth muscle cell | 1.03e-24 | 43 |
smooth muscle myoblast | 1.03e-24 | 43 |
muscle precursor cell | 6.02e-23 | 58 |
myoblast | 6.02e-23 | 58 |
multi-potent skeletal muscle stem cell | 6.02e-23 | 58 |
muscle cell | 4.91e-20 | 55 |
multi fate stem cell | 3.01e-19 | 427 |
somatic stem cell | 1.48e-18 | 433 |
electrically responsive cell | 2.86e-18 | 61 |
electrically active cell | 2.86e-18 | 61 |
preadipocyte | 2.94e-18 | 12 |
stem cell | 2.95e-18 | 441 |
mesodermal cell | 1.63e-17 | 121 |
fibroblast | 7.68e-17 | 76 |
aortic smooth muscle cell | 1.40e-15 | 10 |
cardiocyte | 2.94e-09 | 16 |
fibroblast of dermis | 1.38e-08 | 6 |
smooth muscle cell of the subclavian artery | 2.91e-08 | 5 |
fibroblast of tunica adventitia of artery | 5.81e-07 | 4 |
fibroblast of the aortic adventitia | 5.81e-07 | 4 |
cardiac mesenchymal cell | 7.89e-07 | 4 |
migratory trunk neural crest cell | 7.89e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.33e-16 | 14 |