FFCP PHASE1:Hg19::chr10:126847276..126847294,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:126847276..126847294,-
|short_description=p4@CTBP2
|description=CAGE_peak_4_at_CTBP2_5end
|association_with_transcript=0bp_to_ENST00000531469,uc009yak.2_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1488 | |EntrezGene=1488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2495 | |HGNC=2495 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000531469,uc009yak.2_5end | |||
|cluster_id=chr10:126847276..126847294,- | |||
|description=CAGE_peak_4_at_CTBP2_5end | |||
|id=chr10:126847276..126847294,- | |||
|ontology_enrichment_celltype=CL:0000115!9.66e-12!35;CL:0000213!1.41e-10!57;CL:0000215!1.41e-10!57;CL:0002139!6.52e-10!24;CL:0002078!1.10e-08!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.70e-13;24!CL:0000115;1.03e-10;36!CL:0000071;3.16e-08;18!CL:0002078;1.22e-07;45!CL:0002138;3.25e-07;6!CL:0000213;7.31e-07;58!CL:0000215;7.31e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.82e-13,36;CL:0002139,4.17e-13,24;CL:0000213,4.63e-11,58;CL:0000215,4.63e-11,58;CL:0002078,3.67e-10,45;CL:0000071,5.33e-08,18;CL:0002546,5.33e-08,18;CL:0005020,2.58e-07,6;CL:0002138,2.58e-07,6;CL:0005022,2.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.16e-08;18!CL:0005022;3.25e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.97e-15!115;UBERON:0001049!7.68e-14!57;UBERON:0005068!7.68e-14!57;UBERON:0006241!7.68e-14!57;UBERON:0007135!7.68e-14!57;UBERON:0002616!3.37e-13!59;UBERON:0000477!4.47e-13!286;UBERON:0001017!5.18e-12!82;UBERON:0000955!8.35e-12!69;UBERON:0006238!8.35e-12!69;UBERON:0005743!3.52e-11!86;UBERON:0004111!1.38e-10!241;UBERON:0000073!2.57e-10!94;UBERON:0001016!2.57e-10!94;UBERON:0000468!5.63e-10!659;UBERON:0000467!1.95e-09!625;UBERON:0003080!3.21e-09!42;UBERON:0000480!3.24e-09!626;UBERON:0002780!3.29e-09!41;UBERON:0001890!3.29e-09!41;UBERON:0006240!3.29e-09!41;UBERON:0000922!1.37e-08!612;UBERON:0002050!1.44e-08!605;UBERON:0005423!1.44e-08!605;UBERON:0000923!1.86e-08!604;UBERON:0005291!1.86e-08!604;UBERON:0006598!1.86e-08!604;UBERON:0002532!1.86e-08!604;UBERON:0000025!3.11e-08!194;UBERON:0000062!1.30e-07!511;UBERON:0001893!1.64e-07!34;UBERON:0002020!2.18e-07!34;UBERON:0003528!2.18e-07!34;UBERON:0002791!5.10e-07!33;UBERON:0003075!5.22e-07!86;UBERON:0007284!5.22e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.16e-08;18!UBERON:0001986;3.16e-08;18!UBERON:0004852;3.16e-08;18!UBERON:0000073;5.34e-08;53!UBERON:0002616;5.34e-08;53!UBERON:0002780;6.55e-08;41!UBERON:0001890;6.55e-08;41!UBERON:0006914;5.01e-07;25!UBERON:0000487;8.80e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.06e-16,56;UBERON:0005068,3.06e-16,56;UBERON:0006241,3.06e-16,56;UBERON:0007135,3.06e-16,56;UBERON:0007023,1.68e-15,114;UBERON:0000073,4.50e-14,53;UBERON:0002616,4.50e-14,53;UBERON:0001017,2.83e-13,81;UBERON:0000955,8.07e-13,68;UBERON:0006238,8.07e-13,68;UBERON:0001016,2.61e-11,89;UBERON:0002780,2.86e-10,41;UBERON:0001890,2.86e-10,41;UBERON:0003080,2.86e-10,41;UBERON:0006240,2.86e-10,41;UBERON:0003075,1.03e-09,82;UBERON:0007284,1.03e-09,82;UBERON:0004111,2.48e-09,240;UBERON:0002346,4.11e-09,86;UBERON:0004638,5.33e-08,18;UBERON:0001986,5.33e-08,18;UBERON:0004852,5.33e-08,18;UBERON:0011216,5.39e-08,223;UBERON:0010371,9.82e-08,104;UBERON:0003076,1.17e-07,15;UBERON:0003057,1.17e-07,15;UBERON:0001893,1.74e-07,34;UBERON:0003528,2.47e-07,34;UBERON:0002020,2.47e-07,34;UBERON:0000025,4.22e-07,192;UBERON:0006914,7.05e-07,25;UBERON:0002298,8.65e-07,6 | |||
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| ||
|short_description=p4@CTBP2 | |||
}} | }} |
Latest revision as of 23:12, 16 September 2015
Short description: | p4@CTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CTBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000531469, uc009yak.2_5end |
EntrezGene: | CTBP2 |
HGNC: | 2495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.82e-13 | 36 |
endothelial cell of vascular tree | 4.17e-13 | 24 |
lining cell | 4.63e-11 | 58 |
barrier cell | 4.63e-11 | 58 |
meso-epithelial cell | 3.67e-10 | 45 |
blood vessel endothelial cell | 5.33e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.33e-08 | 18 |
lymphangioblast | 2.58e-07 | 6 |
endothelial cell of lymphatic vessel | 2.58e-07 | 6 |
vascular lymphangioblast | 2.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.06e-16 | 56 |
neural rod | 3.06e-16 | 56 |
future spinal cord | 3.06e-16 | 56 |
neural keel | 3.06e-16 | 56 |
adult organism | 1.68e-15 | 114 |
regional part of nervous system | 4.50e-14 | 53 |
regional part of brain | 4.50e-14 | 53 |
central nervous system | 2.83e-13 | 81 |
brain | 8.07e-13 | 68 |
future brain | 8.07e-13 | 68 |
nervous system | 2.61e-11 | 89 |
regional part of forebrain | 2.86e-10 | 41 |
forebrain | 2.86e-10 | 41 |
anterior neural tube | 2.86e-10 | 41 |
future forebrain | 2.86e-10 | 41 |
neural plate | 1.03e-09 | 82 |
presumptive neural plate | 1.03e-09 | 82 |
anatomical conduit | 2.48e-09 | 240 |
neurectoderm | 4.11e-09 | 86 |
blood vessel endothelium | 5.33e-08 | 18 |
endothelium | 5.33e-08 | 18 |
cardiovascular system endothelium | 5.33e-08 | 18 |
organ system subdivision | 5.39e-08 | 223 |
ecto-epithelium | 9.82e-08 | 104 |
posterior neural tube | 1.17e-07 | 15 |
chordal neural plate | 1.17e-07 | 15 |
telencephalon | 1.74e-07 | 34 |
brain grey matter | 2.47e-07 | 34 |
gray matter | 2.47e-07 | 34 |
tube | 4.22e-07 | 192 |
squamous epithelium | 7.05e-07 | 25 |
brainstem | 8.65e-07 | 6 |