FFCP PHASE1:Hg19::chr17:66287663..66287684,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22901 | |EntrezGene=22901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24102 | |HGNC=24102 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EG1 | |UniProt=Q96EG1 | ||
|association_with_transcript=4bp_to_uc002jhb.1_5end | |association_with_transcript=4bp_to_uc002jhb.1_5end | ||
|cluster_id=chr17:66287663..66287684,+ | |||
|description=CAGE_peak_2_at_ARSG_5end | |description=CAGE_peak_2_at_ARSG_5end | ||
|id=chr17:66287663..66287684,+ | |id=chr17:66287663..66287684,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.31e-25!140;CL:0002087!1.02e-19!119;CL:0002031!2.71e-19!124;CL:0000542!4.03e-17!53;CL:0000051!4.03e-17!53;CL:0000037!5.36e-17!172;CL:0000566!5.36e-17!172;CL:0000838!5.42e-17!52;CL:0002032!2.16e-16!165;CL:0000837!2.16e-16!165;CL:0000988!3.78e-16!182;CL:0000791!1.59e-10!18;CL:0000789!1.59e-10!18;CL:0002420!1.59e-10!18;CL:0002419!1.59e-10!18;CL:0000790!1.59e-10!18;CL:0000945!5.36e-09!24;CL:0000826!5.36e-09!24;CL:0000766!1.79e-08!76;CL:0000084!2.38e-08!25;CL:0000827!2.38e-08!25;CL:0000625!8.02e-08!11 | |ontology_enrichment_celltype=CL:0000738!1.31e-25!140;CL:0002087!1.02e-19!119;CL:0002031!2.71e-19!124;CL:0000542!4.03e-17!53;CL:0000051!4.03e-17!53;CL:0000037!5.36e-17!172;CL:0000566!5.36e-17!172;CL:0000838!5.42e-17!52;CL:0002032!2.16e-16!165;CL:0000837!2.16e-16!165;CL:0000988!3.78e-16!182;CL:0000791!1.59e-10!18;CL:0000789!1.59e-10!18;CL:0002420!1.59e-10!18;CL:0002419!1.59e-10!18;CL:0000790!1.59e-10!18;CL:0000945!5.36e-09!24;CL:0000826!5.36e-09!24;CL:0000766!1.79e-08!76;CL:0000084!2.38e-08!25;CL:0000827!2.38e-08!25;CL:0000625!8.02e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.19e-12;18!CL:0000789;1.19e-12;18!CL:0002419;1.19e-12;18!CL:0000625;6.95e-11;11!CL:0000542;1.76e-10;53!CL:0000084;1.92e-09;25!CL:0000945;3.93e-09;24!CL:0000236;1.96e-07;13 | |ontology_enrichment_celltype_v019=CL:0000791;1.19e-12;18!CL:0000789;1.19e-12;18!CL:0002419;1.19e-12;18!CL:0000625;6.95e-11;11!CL:0000542;1.76e-10;53!CL:0000084;1.92e-09;25!CL:0000945;3.93e-09;24!CL:0000236;1.96e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.73e-25,136;CL:0002087,3.07e-19,115;CL:0000838,5.37e-19,52;CL:0002031,5.50e-19,120;CL:0000542,2.29e-18,53;CL:0000051,2.29e-18,53;CL:0000037,4.75e-17,168;CL:0000988,3.73e-16,177;CL:0002032,5.56e-16,161;CL:0000837,5.56e-16,161;CL:0000791,8.87e-13,18;CL:0000789,8.87e-13,18;CL:0002420,8.87e-13,18;CL:0002419,8.87e-13,18;CL:0000790,8.87e-13,18;CL:0000625,5.21e-11,11;CL:0000084,9.55e-10,25;CL:0000827,9.55e-10,25;CL:0000945,4.09e-09,24;CL:0000826,4.09e-09,24;CL:0002393,7.21e-09,9;CL:0002397,7.21e-09,9;CL:0000766,1.39e-07,72;CL:0000236,4.59e-07,14;CL:0000094,8.14e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.19e-12;18!CL:0000051;1.76e-10;53 | |ontology_enrichment_development_v019=CL:0000790;1.19e-12;18!CL:0000051;1.76e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.18e-13!57;UBERON:0005068!3.18e-13!57;UBERON:0006241!3.18e-13!57;UBERON:0007135!3.18e-13!57;UBERON:0005743!5.95e-13!86;UBERON:0000073!1.90e-12!94;UBERON:0001016!1.90e-12!94;UBERON:0001017!2.38e-12!82;UBERON:0007023!2.75e-12!115;UBERON:0000955!2.49e-11!69;UBERON:0006238!2.49e-11!69;UBERON:0002780!3.03e-11!41;UBERON:0001890!3.03e-11!41;UBERON:0006240!3.03e-11!41;UBERON:0002616!1.11e-10!59;UBERON:0003080!1.47e-10!42;UBERON:0001869!1.09e-09!32;UBERON:0003075!1.65e-09!86;UBERON:0007284!1.65e-09!86;UBERON:0001893!3.60e-09!34;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0002791!1.06e-08!33;UBERON:0002346!1.52e-08!90;UBERON:0003056!2.12e-08!61;UBERON:0002619!1.04e-07!22;UBERON:0001950!2.40e-07!20;UBERON:0000956!4.02e-07!25;UBERON:0000203!4.02e-07!25;UBERON:0002390!4.68e-07!102;UBERON:0003061!4.68e-07!102 | |ontology_enrichment_uberon=UBERON:0001049!3.18e-13!57;UBERON:0005068!3.18e-13!57;UBERON:0006241!3.18e-13!57;UBERON:0007135!3.18e-13!57;UBERON:0005743!5.95e-13!86;UBERON:0000073!1.90e-12!94;UBERON:0001016!1.90e-12!94;UBERON:0001017!2.38e-12!82;UBERON:0007023!2.75e-12!115;UBERON:0000955!2.49e-11!69;UBERON:0006238!2.49e-11!69;UBERON:0002780!3.03e-11!41;UBERON:0001890!3.03e-11!41;UBERON:0006240!3.03e-11!41;UBERON:0002616!1.11e-10!59;UBERON:0003080!1.47e-10!42;UBERON:0001869!1.09e-09!32;UBERON:0003075!1.65e-09!86;UBERON:0007284!1.65e-09!86;UBERON:0001893!3.60e-09!34;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0002791!1.06e-08!33;UBERON:0002346!1.52e-08!90;UBERON:0003056!2.12e-08!61;UBERON:0002619!1.04e-07!22;UBERON:0001950!2.40e-07!20;UBERON:0000956!4.02e-07!25;UBERON:0000203!4.02e-07!25;UBERON:0002390!4.68e-07!102;UBERON:0003061!4.68e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.59e-08;32!UBERON:0001893;3.64e-08;34!UBERON:0001950;4.29e-08;20!UBERON:0002619;6.80e-08;22!UBERON:0002780;7.61e-08;41!UBERON:0001890;7.61e-08;41!UBERON:0003528;1.37e-07;34!UBERON:0002020;1.37e-07;34!UBERON:0000073;1.47e-07;53!UBERON:0002616;1.47e-07;53!UBERON:0002791;2.00e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0001869;2.59e-08;32!UBERON:0001893;3.64e-08;34!UBERON:0001950;4.29e-08;20!UBERON:0002619;6.80e-08;22!UBERON:0002780;7.61e-08;41!UBERON:0001890;7.61e-08;41!UBERON:0003528;1.37e-07;34!UBERON:0002020;1.37e-07;34!UBERON:0000073;1.47e-07;53!UBERON:0002616;1.47e-07;53!UBERON:0002791;2.00e-07;32 | ||
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| ||
|short_description=p2@ARSG | |short_description=p2@ARSG | ||
}} | }} |
Latest revision as of 23:39, 16 September 2015
Short description: | p2@ARSG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARSG_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_uc002jhb.1_5end |
EntrezGene: | ARSG |
HGNC: | 24102 |
UniProt: | Q96EG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.73e-25 | 136 |
nongranular leukocyte | 3.07e-19 | 115 |
lymphoid lineage restricted progenitor cell | 5.37e-19 | 52 |
hematopoietic lineage restricted progenitor cell | 5.50e-19 | 120 |
lymphocyte | 2.29e-18 | 53 |
common lymphoid progenitor | 2.29e-18 | 53 |
hematopoietic stem cell | 4.75e-17 | 168 |
hematopoietic cell | 3.73e-16 | 177 |
hematopoietic oligopotent progenitor cell | 5.56e-16 | 161 |
hematopoietic multipotent progenitor cell | 5.56e-16 | 161 |
mature alpha-beta T cell | 8.87e-13 | 18 |
alpha-beta T cell | 8.87e-13 | 18 |
immature T cell | 8.87e-13 | 18 |
mature T cell | 8.87e-13 | 18 |
immature alpha-beta T cell | 8.87e-13 | 18 |
CD8-positive, alpha-beta T cell | 5.21e-11 | 11 |
T cell | 9.55e-10 | 25 |
pro-T cell | 9.55e-10 | 25 |
lymphocyte of B lineage | 4.09e-09 | 24 |
pro-B cell | 4.09e-09 | 24 |
intermediate monocyte | 7.21e-09 | 9 |
CD14-positive, CD16-positive monocyte | 7.21e-09 | 9 |
myeloid leukocyte | 1.39e-07 | 72 |
B cell | 4.59e-07 | 14 |
granulocyte | 8.14e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.03e-13 | 53 |
regional part of brain | 1.03e-13 | 53 |
neural tube | 4.11e-13 | 56 |
neural rod | 4.11e-13 | 56 |
future spinal cord | 4.11e-13 | 56 |
neural keel | 4.11e-13 | 56 |
regional part of forebrain | 6.33e-12 | 41 |
forebrain | 6.33e-12 | 41 |
anterior neural tube | 6.33e-12 | 41 |
future forebrain | 6.33e-12 | 41 |
brain | 1.01e-11 | 68 |
future brain | 1.01e-11 | 68 |
central nervous system | 3.95e-11 | 81 |
adult organism | 6.82e-11 | 114 |
nervous system | 1.41e-10 | 89 |
cerebral hemisphere | 1.41e-09 | 32 |
telencephalon | 2.29e-09 | 34 |
brain grey matter | 1.81e-08 | 34 |
gray matter | 1.81e-08 | 34 |
regional part of telencephalon | 1.85e-08 | 32 |
neocortex | 2.80e-08 | 20 |
regional part of cerebral cortex | 4.24e-08 | 22 |
neural plate | 8.45e-07 | 82 |
presumptive neural plate | 8.45e-07 | 82 |