FFCP PHASE1:Hg19::chr4:185395191..185395226,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:185395191..185395226,- to FFCP PHASE1:Hg19::chr4:185395191..185395226,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3660 | |EntrezGene=3660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6117 | |HGNC=6117 | ||
|TSSclassifier=strong | |||
|UniProt=D6RCK5,D6RED1,D6RB08 | |UniProt=D6RCK5,D6RED1,D6RB08 | ||
|association_with_transcript=0bp_to_ENST00000507523,ENST00000509274,ENST00000510814_5end | |||
|cluster_id=chr4:185395191..185395226,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_IRF2_5end | |||
|id=chr4:185395191..185395226,- | |||
|ontology_enrichment_celltype=CL:0000738!2.48e-44!140;CL:0002087!3.47e-40!119;CL:0002031!6.25e-36!124;CL:0000037!5.27e-33!172;CL:0000566!5.27e-33!172;CL:0000988!3.08e-32!182;CL:0002032!1.09e-30!165;CL:0000837!1.09e-30!165;CL:0002057!9.17e-21!42;CL:0000766!2.06e-20!76;CL:0000542!6.24e-20!53;CL:0000051!6.24e-20!53;CL:0000838!7.83e-20!52;CL:0000860!1.28e-19!45;CL:0002194!2.73e-18!63;CL:0000576!2.73e-18!63;CL:0000040!2.73e-18!63;CL:0000559!2.73e-18!63;CL:0002009!2.58e-17!65;CL:0000839!5.94e-17!70;CL:0000557!1.14e-15!71;CL:0000763!1.71e-12!112;CL:0000049!1.71e-12!112;CL:0000048!1.89e-12!430;CL:0000723!9.78e-12!436;CL:0000945!2.41e-11!24;CL:0000826!2.41e-11!24;CL:0002320!3.66e-11!365;CL:0000034!4.90e-11!444;CL:0000134!4.94e-11!358;CL:0000084!7.64e-09!25;CL:0000827!7.64e-09!25;CL:0000236!2.08e-08!14;CL:0000791!7.93e-08!18;CL:0000789!7.93e-08!18;CL:0002420!7.93e-08!18;CL:0002419!7.93e-08!18;CL:0000790!7.93e-08!18;CL:0000219!9.10e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.81e-20;33!CL:0002057;7.81e-20;33!CL:0000576;1.36e-18;48!CL:0000945;1.54e-17;24!CL:0002087;1.17e-16;104!CL:0000473;3.19e-16;39!CL:0000234;3.19e-16;39!CL:0000542;1.57e-15;53!CL:0000738;7.06e-14;136!CL:0000766;2.62e-13;69!CL:0000236;2.18e-11;13!CL:0000084;1.01e-09;25!CL:0000791;1.90e-09;18!CL:0000789;1.90e-09;18!CL:0002419;1.90e-09;18!CL:0000625;7.18e-09;11!CL:0000094;9.06e-09;8!CL:0000988;9.50e-09;177!CL:0000081;3.60e-07;11!CL:0000219;8.10e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.09e-63,136;CL:0002087,4.00e-56,115;CL:0002031,3.64e-52,120;CL:0000037,1.15e-48,168;CL:0000988,3.20e-47,177;CL:0002032,2.89e-46,161;CL:0000837,2.89e-46,161;CL:0000766,1.25e-30,72;CL:0000860,8.46e-28,42;CL:0002057,8.46e-28,42;CL:0000473,2.21e-27,48;CL:0000234,2.21e-27,48;CL:0000838,3.41e-27,52;CL:0000542,2.36e-26,53;CL:0000051,2.36e-26,53;CL:0002194,5.00e-26,59;CL:0000576,5.00e-26,59;CL:0000040,5.00e-26,59;CL:0000559,5.00e-26,59;CL:0000839,3.92e-25,66;CL:0002009,1.35e-24,61;CL:0000557,3.64e-23,67;CL:0000763,3.44e-20,108;CL:0000049,3.44e-20,108;CL:0000945,1.05e-17,24;CL:0000826,1.05e-17,24;CL:0000134,1.29e-14,354;CL:0002320,4.80e-14,361;CL:0000048,1.79e-13,427;CL:0000723,1.06e-12,433;CL:0000236,2.36e-12,14;CL:0000034,3.88e-12,441;CL:0000219,2.58e-11,386;CL:0000791,9.58e-10,18;CL:0000789,9.58e-10,18;CL:0002420,9.58e-10,18;CL:0002419,9.58e-10,18;CL:0000790,9.58e-10,18;CL:0000084,9.65e-10,25;CL:0000827,9.65e-10,25;CL:0000094,4.78e-09,8;CL:0000625,7.85e-09,11;CL:0002393,1.23e-07,9;CL:0002397,1.23e-07,9;CL:0000081,2.11e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.60e-20;42!CL:0000051;1.57e-15;53!CL:0000790;1.90e-09;18!CL:0000049;2.47e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.43e-24!112;UBERON:0002390!8.30e-24!102;UBERON:0003061!8.30e-24!102;UBERON:0002371!2.78e-14!80;UBERON:0002405!1.69e-12!115;UBERON:0001474!4.40e-12!86;UBERON:0004765!1.31e-11!101;UBERON:0001434!1.31e-11!101;UBERON:0002384!7.87e-11!375;UBERON:0002204!2.28e-10!167;UBERON:0003081!1.67e-09!216;UBERON:0000178!2.78e-09!15;UBERON:0000179!2.78e-09!15;UBERON:0000463!2.78e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-12;15!UBERON:0000179;1.09e-12;15!UBERON:0000463;1.09e-12;15!UBERON:0002390;1.59e-10;32!UBERON:0002193;9.00e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.43e-36,108;UBERON:0002390,1.57e-35,98;UBERON:0003061,1.57e-35,98;UBERON:0002405,1.35e-25,93;UBERON:0002371,2.70e-21,76;UBERON:0001474,2.92e-19,82;UBERON:0004765,9.15e-17,90;UBERON:0001434,3.88e-16,100;UBERON:0002384,6.36e-14,371;UBERON:0003081,3.33e-13,203;UBERON:0000178,1.90e-12,15;UBERON:0000179,1.90e-12,15;UBERON:0000463,1.90e-12,15;UBERON:0002204,2.63e-09,167 | |||
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| ||
|short_description=p4@IRF2 | |||
}} | }} |
Latest revision as of 01:31, 17 September 2015
Short description: | p4@IRF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IRF2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000507523, ENST00000509274, ENST00000510814_5end |
EntrezGene: | IRF2 |
HGNC: | 6117 |
UniProt: | D6RCK5D6RED1D6RB08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.43e-36 | 108 |
hematopoietic system | 1.57e-35 | 98 |
blood island | 1.57e-35 | 98 |
immune system | 1.35e-25 | 93 |
bone marrow | 2.70e-21 | 76 |
bone element | 2.92e-19 | 82 |
skeletal element | 9.15e-17 | 90 |
skeletal system | 3.88e-16 | 100 |
connective tissue | 6.36e-14 | 371 |
lateral plate mesoderm | 3.33e-13 | 203 |
blood | 1.90e-12 | 15 |
haemolymphatic fluid | 1.90e-12 | 15 |
organism substance | 1.90e-12 | 15 |
musculoskeletal system | 2.63e-09 | 167 |